Gene PHATR_36843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36843 
Symbol 
ID7204549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp491180 
End bp492379 
Gene Length1200 bp 
Protein Length399 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185716 
Protein GI219120969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAG ACACCACACA AAAAAGAAGC AAGCGTAATC AACAAGGTTA CGAAAGTAAG 
AACAACAACT ACAACAACAA TAAAATGTCC ACGACCTACT CGAGCGTGGG CGGTACCGCC
GTGAAGCGCA TTCGCGTTCC GCACCCGAAC GATGTCCTTA GTGGACGAGG AGGAGGAATA
AATTCGCACG TGGGAAACGT ACGGTTTCGC GAATGGGTGG CAGTGCGCAA GAACGACTAC
ACGCTGGCAC CTTCCAAGGC TGACAAGGCA CGCGTAGCCA AGGAAGTTAT TGACCTGGTA
GAGCACCAAA CCCCGCCCGG GCGGTTTCTG CAAAAAGACC CGACGGCAGT TGGTGGTGCA
GGCTGGTGGG TGGAGATCGA TGAAGAACGA GTCATGGCGA AGACATCGCA GGCTCTTCGT
GAGGGCGCGC CACAGATTCG AGCACTGCAT CGAGACGAGT TGGATGAACG AAAGTCCAAC
TACGACAGAC GGAGAAAGGC GGATGCCAAA CCCGAGAGTT CGGGAAAAAA CAACAAACGC
AGCCTTGAGG AGATGAGGAG TGCGGCATCT TCGCCAGCAA CAACAACACC CGTATCGAAT
TCCATAAGTC GCATGCATGA ACAAGCCGTC AATGAATTGC GTGCCAACGC CGAAGCAGCT
CGCGAAGCTA AACAAGTGCG CTTGGAGTAC GGAGGAAATG TTGTTCTTCC ATCGGAGGAA
ACCCCACCCT TGACTTCAAC AAAGATCGAA GATAACGATG CGATGGTACT GCCACCACCT
CTAGATCTCG ATTGCGTTCC TGCCCCCCAC AAAAACATGA AACGAACACA TTCCTTAGCC
CTTTCAGATC TAGGGAACAC GGATGATTGG TGTGCTACAG ACTTTGTCAA TCCATTCGAG
GATGAGTACG AAGCGCAAGA GTTCTCCTGG ACACCGCCAT CGCCCCGTCC TGGGATCCTG
CGCGAAAGTA GCACGAGCAA CAACAGTGAC ATGGGCGGAA TTGGAGCGTT GATGAGATCC
GATTCCTCTC GGTCCAACAC GTCATCGTCC AATCACAACA CTTCCAACAA TGGGGTACGT
CCGAAGAATA CCGTGGCCAA TATGAGCAAC AGGTACGGTA AAGACAGCAA GCATAAAGAC
GAGATAACTC CTCTTGACGA ATGGTGGGAT GTGGACTCCT ACGTTCCCGT CTCGCCCTGA
 
Protein sequence
MTADTTQKRS KRNQQGYESK NNNYNNNKMS TTYSSVGGTA VKRIRVPHPN DVLSGRGGGI 
NSHVGNVRFR EWVAVRKNDY TLAPSKADKA RVAKEVIDLV EHQTPPGRFL QKDPTAVGGA
GWWVEIDEER VMAKTSQALR EGAPQIRALH RDELDERKSN YDRRRKADAK PESSGKNNKR
SLEEMRSAAS SPATTTPVSN SISRMHEQAV NELRANAEAA REAKQVRLEY GGNVVLPSEE
TPPLTSTKIE DNDAMVLPPP LDLDCVPAPH KNMKRTHSLA LSDLGNTDDW CATDFVNPFE
DEYEAQEFSW TPPSPRPGIL RESSTSNNSD MGGIGALMRS DSSRSNTSSS NHNTSNNGVR
PKNTVANMSN RYGKDSKHKD EITPLDEWWD VDSYVPVSP