Gene PHATR_36828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36828 
Symbol 
ID7204541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp455432 
End bp456406 
Gene Length975 bp 
Protein Length324 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185890 
Protein GI219121329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTT ACGAAGAAAA GAAGGCAGAG ACTTTGAAAG GCTCCCTCGC CGGAAATGGG 
GGGACATCGC AGGAAGCTCT TTTTGGTTTG GCGGCCGGAG CAGTTTTCGG AATGATTTCT
CCGTTGGTCG GTCATCCCTT TGATACGGTC AAAACTCGAA TGCAAGCCGA AGCGAGCTAT
GCAAATACTG GATTTCTGCA GACTGTTATG CACATCTACA AAGCAGAAGG AGCTAGGGGC
TTTTATCGCG GCTTTATTCC GCCTCTAGTC GGCTCCATCG CTTTTCGTGG ACTTCTTTTC
AGTGCGTACT CAGGTGCATA CGCGGCTTGT GAGCAAATTC CTGTTTTACA CGATCCACTT
CCTTACACCG GAGGCTTGAG ACCAAGTGTC ATAGTTGGGG CTATGGCAGC GGCTTTTTCC
AGAGCTGTGA TCGAGTCGCC CCTGGATTTT GTGAAGGTCC GAATAATGGT CGGCAAAGAG
GCGATGCTCG ATTCGTCCTC TTCGAAAGTT GTCAAAAATT CAATGGTGTC ATCTTTTCGA
TTATTTTCTG CTTCACCGGT ATCATCTATA CGTCATGTCT ACCACGGCTT TTTCCCGACT
CTTTTTCGAA CAATGGGCTT GCTGGGATCC TTCTTTGTAA TGGTGGACTA TTCTGTACGA
TACATTCCAG ATGTCGTCAA CGCCCCTGTC ACTGGGCCGT TCTTTAAAGG CGGCGTATGC
GCAACAGCTG CTTGGGTATT TGCCTTTCCG TTCGAATCAG TCAAGTCAGT TATTCAAGCA
GATACAACAG GAAAGTACAA GAATTTGAGG AACTCGACTT GGGTTGTTAT GCGACAACTC
CATCGGGAAC GAGGAATCAA AGGATTGTAT CGAGGATTTG CACCAGGAGC ATCAAGGTCT
TTCGTGGCAA ATGGCGTGAG TATGTCAGTC TATACATGGT TCCAAAATTA CCTGAGAACC
GATACCGCTA TGTAG
 
Protein sequence
MTSYEEKKAE TLKGSLAGNG GTSQEALFGL AAGAVFGMIS PLVGHPFDTV KTRMQAEASY 
ANTGFLQTVM HIYKAEGARG FYRGFIPPLV GSIAFRGLLF SAYSGAYAAC EQIPVLHDPL
PYTGGLRPSV IVGAMAAAFS RAVIESPLDF VKVRIMVGKE AMLDSSSSKV VKNSMVSSFR
LFSASPVSSI RHVYHGFFPT LFRTMGLLGS FFVMVDYSVR YIPDVVNAPV TGPFFKGGVC
ATAAWVFAFP FESVKSVIQA DTTGKYKNLR NSTWVVMRQL HRERGIKGLY RGFAPGASRS
FVANGVSMSV YTWFQNYLRT DTAM