Gene PHATR_36789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36789 
Symbol 
ID7204644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp374662 
End bp375687 
Gene Length1026 bp 
Protein Length341 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185873 
Protein GI219121294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCG GAAGTGTCGG AATTAAGCGG GCTCGACTAG ATCGATCAGT CGTCATTCTC 
TTGGACGACC CGGATGATAC ACCTTCCCAT AAGGTCCAAA TCACTTCAGA AATGGAACGA
TTACATCGAC TACACGGTAC TTCGCTCATT CTCGATGCTT GCCAACTGTT GAACCTTTCG
TGCTATGCGT CAGCAACGAC CATTTTCCAC CGATTCTATC ACCGAGTGTC CCTGAAAACC
TGTTGTGTTT GGAGTGCTGC AATGGCGAGC ATCGTGCTGG CCGCAAAGGT GGAAGAAGTT
GCTATCGCAC TCCGGAACGT GATCGCGACG TTCTCTCATT TGTATCGCAG ACGTCGCTTG
CTGGTTTCCT GCGATCAAAG CGAGTTACGA GCGATACTGT CGCATCCCTC CGTAGCCGCA
TCGTCCGTCA TGACGGAAAC GGCTTCCTGG ACGAATGTGG AGAACGAACG AGCGAAGCTG
GTAAACGTGC CGCCCATTCT GTCTCCAAAG GGATCTATAT ACAAAGATTG GTTTGATGCA
ATTATTGATA CAGAGAATCA GATTTTGCGT CAGCTGGGTT TTACGTTGCA CTGGATTCCC
GATCATCGTC CCCATAAGTT TCTGTCCTAT TTTTTACTGG CTCTGCAAAT CGACGATGAG
CTCTTTACAC AGTCGGCTTG GAATTATTGT AACGATTCAT GTCGGCTGGA TCTATGCGTC
CGATATCAGC CGGAAGTAAT TGCCTGCGCG ACGTTGTATG CGACAGCCTT AGAGTTTCGC
TGGGAACTAC CGATGCAGCC AGAGCCGTGG TGGGCTGTTT TTTGTGGGGG AAATTGTGAT
CGACATCTCT TTCGAGCCGT TAATACTATC CTCGGGTTAG TAGACAAAGC CAACCTGGAT
GTTTGTGTGG CATCGAAAGC TTTTGTCCGT TCGTTAGTTG ACAATGGAAG TTTCGTAGAT
CCTGATCACT TTATTTGGTT CACGCTCGAG AAGAGAGAGG GTGGCGAAGG AAGCTTGACT
ACCTAG
 
Protein sequence
MPTGSVGIKR ARLDRSVVIL LDDPDDTPSH KVQITSEMER LHRLHGTSLI LDACQLLNLS 
CYASATTIFH RFYHRVSLKT CCVWSAAMAS IVLAAKVEEV AIALRNVIAT FSHLYRRRRL
LVSCDQSELR AILSHPSVAA SSVMTETASW TNVENERAKL VNVPPILSPK GSIYKDWFDA
IIDTENQILR QLGFTLHWIP DHRPHKFLSY FLLALQIDDE LFTQSAWNYC NDSCRLDLCV
RYQPEVIACA TLYATALEFR WELPMQPEPW WAVFCGGNCD RHLFRAVNTI LGLVDKANLD
VCVASKAFVR SLVDNGSFVD PDHFIWFTLE KREGGEGSLT T