Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_36733 |
Symbol | |
ID | 7204499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 244035 |
End bp | 245213 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185664 |
Protein GI | 219120865 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.48638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCCC TACCGCAGCG ATCTCTTCTA CAAGGAAACA GTGGTATAGT GCGCGAAGAA ACCCGTTCCC GCTACGACAC CACGGGATGG TTTTCCGACA GCGACGAAGA AGACGCCGCC GAACGAGCCT TGTCCGAGCG CTATGGCGAA GCATCCGAAG CCAAGGACCG TAGCAACGGT ACCGCCAATA CGCAAAGCAC AACATCTCCG ACTGCGGGAG GCGTCAATGC GCAAGAAATT GCAGCACTCT ACGACAAGGG CGTCACGGTG AAGCCCAAAC GCCGTCGCGT GACGTTGGAA GAAACGCATT TGACCGGCGC AGACGGCTTG ATTCGTTTAC CGCACGATCT CTCCGCTGCC CTTCACTACC GTCCGCCCCC ACACAAACGC GACGTTCCGA CCGCTGCTGC GTACAGCCGC CGTCTAATGC GCGGGTACGA ACAATGGTTC CAACAACTCG TGCCGTCCAC GGCGACGGAC GACGCCGCTC TCAAGACCTC CAGTCTCGGG GCCAAGAAAA GCGTCAAGGC CTTTGTGGAG ACCATGCGTC ACGCTGTCCG TAATCAGCAT TTGGAGCGCA TCTACGGTCG CGAACGGGCC GATGCTATGC TCGTTGAACT CGAACACGGC TTGCGACAGC AGCAGGAGGT CACCTCCGGG GATGAACCCT ACATCGAGGC CGATGACGAT GGGCAGCGCG CCAAGCCCCC CGTTACCCGT CAAACGATAC CCGACGCGAC GACCTTTACA TCATCCAGAG ACCAAGACAA TCACCAAATT AGAAATCACA ATGTCACAGG TAGCCCCGTG GCCATGAACA GAAATGATAC CACGGGGGAG CGACGTCGCA TCCTAGACGA TGACAGTGAC GAGGAGCACG AAGCGACGTT TGCCGATGAT CACGACCAGA CCACCGAAGC CCTCGAACAA CAGTCTAGTG GGAAGGGTCG TACAATGGAC GAAGCTGAGT TGCGCGTGGA CAGCCACAAC GACAGCGTCT CGGGAGACCA TGATGATGAG GCTGTGGCGG CTGGTGGTCA CCACAAATCA TCGGATGCGT TACCACACCA GCGGTCTCCT TCAACTACCG AGGTCTCGGT GGGAACACAA GATTCGGAAA CCATGACCAT CATTCCGACA ATGACAATGG CTTCGCAAAG CGACGAAAGC AATAACTAA
|
Protein sequence | MTSLPQRSLL QGNSGIVREE TRSRYDTTGW FSDSDEEDAA ERALSERYGE ASEAKDRSNG TANTQSTTSP TAGGVNAQEI AALYDKGVTV KPKRRRVTLE ETHLTGADGL IRLPHDLSAA LHYRPPPHKR DVPTAAAYSR RLMRGYEQWF QQLVPSTATD DAALKTSSLG AKKSVKAFVE TMRHAVRNQH LERIYGRERA DAMLVELEHG LRQQQEVTSG DEPYIEADDD GQRAKPPVTR QTIPDATTFT SSRDQDNHQI RNHNVTGSPV AMNRNDTTGE RRRILDDDSD EEHEATFADD HDQTTEALEQ QSSGKGRTMD EAELRVDSHN DSVSGDHDDE AVAAGGHHKS SDALPHQRSP STTEVSVGTQ DSETMTIIPT MTMASQSDES NN
|
| |