Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_36721 |
Symbol | |
ID | 7204610 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 222001 |
End bp | 223295 |
Gene Length | 1295 bp |
Protein Length | 323 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185658 |
Protein GI | 219120853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCTC CCAAAAAGCC GGAGGACCCT CAGGAAGCAG CCAAGAACCA AGCGATTGAT AAAGAGTTAG AGCGTGCCAA ACAACAAGAA GACCTAAAGG TCAAGCTGTT ATTATTGGGT GCCGGAGAAT CCGGAAAGTC TACAATTTTT AAACAAATGC GAATTTTGCA TGGGGCTCCG CGAACCGAGG ATGATTTACG CATGTACGGA GTTGTGGTTC GTTCGAATAT TGTCACCGCT ATGCGGAAGC TGTGTGAACA CCTGCGGGGG TTAGGAATGA TAGATCAGTT AGCGGCAGAG GACCCGCTCG CGGATGAAGA CGGGACCGGA ATGAGACCCA TCGACGCGTT CAATCTCGTT GTTGCACATT TGGTAGACAA CACTGCGTCA CCGGATAGTT TGGATCCGCC ATACGCCAAC GGTACTGATT GGGTTGGACA GAGCCCAAGA GCAGGATTGG GACCGAACAA CGATGCAAAG AAATTTTTGC AGCTGTGGAG ACCGATCAAA GTTCTTTGGC AGGTGAGTCG TGTGTAGTGT CGTGAGGTCG CGTTGTGTAG ACCTGCTCTC TTTTTATATA ACAACACACA CCTAATTGTT TCGCTTAGTC TAAAACCATG AAAGAAGTAT GGTCTAGGAG AGCAGCAATG AACGTAATTG ACGGACACAA AGAATATCTA CAAGACCTGC CACGAATTGC GTCCCCGGAC TTTCAACCGA CTCAGCAAGA CATTCTCCTT GCTCGAGTGA AAACGAACCA AGTTGTAATG GAACGGTACC GGATCGATGG CATTGAGTTT GAGATGTACG ACGTTGGGGG GCAGCGCTCC GAACGGCGCA AATGGATCAG TTGCTTTGAA AACGTGGACG CCGTTATTTT TGTGGCCGCG CTATCAGAAT ATGATCAAGC TCTTGCGGAA TCCAAACGTA CAAATCGCAT GAGCGAAGCA TTAGAACTAT TCCGTTCCGT ATGCAACAAC AGGGCGTTTG CAAACACATC GATTATGCTC TTTTTAAACA AGAAAGACGT ATTTGCGGAA AAAATCCACT ACAGTGACAT AGTCTCTCAA ACGCCATTCT CTGACTATCC CTACCCACCG AGAGAGTTTA ATAGCGGTGT CCTATACTTC ATCGAAAAGT TCAAAGAATG CCTCATTGAC GATGACTTCA ATGACTCGTT TATCCATGTT ACTTGCGCAA CTGATACAAA TAACATGGAA TTCGTCTTGG ACTCGACACG GACAATTATC ATGACCGACA ACCTTCGAAG GTCAGGCTTT CTGGGCCCAG GCTAA
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Protein sequence | MPAPKKPEDP QEAAKNQAID KELERAKQQE DLKVKLLLLG AGESGKSTIF KQMRILHGAP RTEDDLRMYG VVVRSNIVTA MRKLSLWRPI KVLWQSKTMK EVWSRRAAMN VIDGHKEYLQ DLPRIASPDF QPTQQDILLA RVKTNQVVME RYRIDGIEFE MYDVGGQRSE RRKWISCFEN VDAVIFVAAL SEYDQALAES KRTNRMSEAL ELFRSVCNNR AFANTSIMLF LNKKDVFAEK IHYSDIVSQT PFSDYPYPPR EFNSGVLYFI EKFKECLIDD DFNDSFIHVT CATDTNNMEF VLDSTRTIIM TDNLRRSGFL GPG
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