| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_36648 |
|---|
| Symbol | |
|---|
| ID | 7204772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | - |
|---|
| Start bp | 8973 |
|---|
| End bp | 10049 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185811 |
|---|
| Protein GI | 219121164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.478736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACCTG CCACCCGGCA AATGACAACC GAAGCTGTCT TCGCTCACAT CCTGGACAAC
ATCCCTTTGT TATCCCGAGA GCATCCCATT TGTCTCAGTT TCCAGCAACA AGGTTACGAG
TCCGCCATCG ACATTCTATC CATCTTTGAG AATGAACTTG AAACCCTTGG GTACATTTCC
CCCACGGCTG TCAATGGTGT CGAGAATGTA CGTATTCCCC TGCTCATGGC ACACCGGCAA
ATTGTACGCC ACTTCCTGCG CTGGCAGGCA TCCCTTGAAC ATCAAAAGGG GAGTCCCTTG
AAGTCTTCAG AACTCATTGC ATTGAATAAC GAAGACTTTG TCCAGTATTG AGGATCTGCT
CTCGGGCAAG TGTCAACCAC TACCAGCCCT TCGACATTGA ATACAACCTC AACAAACTCC
ATTAGCAAGG TGTGATCTGC TGCAGACGAC TTCAAGCGTG GTGTCAAGCG GGACAAAACA
CATTACCCTG TGCTTAAGGA CAACAAGTAC TGGGATAATT TCTATCAATC TTTTGTGGTC
ACCGCCGTAT CGCACAACAT TGAGAAGGTC CTTGATCCCA CGTATGCCCC TACGGAACCA
TCTGAAAGGG CCCTCTTCGA GGAGCAGAAA AAGTTTGTGT ATTCTGCTTT AGAACATAGG
TTACAGACAG ACATGGGCAA AAACCTTGTT CAGGAGCATA GTTTCGACTT CGATGCGCAA
GAAGTATTTC GTAAAGTCGT TAAACATTAT ACGGAATCAG CAAGTGCAAA GATCAGTTCA
GCTACTATGC TGGGGTACCT CACCACAGCA AAGTATGGAT CCTTGTGGAC AGGTACAGCT
GAAGGGCTTA TCCTCCATTG GAAGAACCAC CTCCGCATAT ACCACAATAC GGTCCCGACG
GCTGAGCAAC TCCCAAAGCA ATTGTGTCTT AGTCTTTTGG AGAACGCAGT GCACGATGTC
CCGGAGCTTC GACAAGTAAA AATCACAGCG ACTCTCGATC TTGCAAAGGG AGGTAACCCA
ATTATAACGG ATTCTTCAAT ACTCACGCAA TGTATTGTTG ATACAAAGAG AGAGTAA
|
|---|
| Protein sequence | MVPATRQMTT EAVFAHILDN IPLLSREHPI CLSFQQQGYE SAIDILSIFE NELETLGYIS
PTAVNGVEND NKYWDNFYQS FVVTAVSHNI EKVLDPTYAP TEPSERALFE EQKKFVYSAL
EHRLQTDMGK NLVQEHSFDF DAQEVFRKVV KHYTESASAK ISSATMLGYL TTAKYGSLWT
GTAEGLILHW KNHLRIYHNT VPTAEQLPKQ LCLSLLENAV HDVPELRQVK ITATLDLAKG
GNPIITDSSI LTQCIVDTKR E
|
|---|
| |