Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_2957 |
Symbol | |
ID | 7204745 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 799358 |
End bp | 800479 |
Gene Length | 1122 bp |
Protein Length | 338 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185955 |
Protein GI | 219121463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCGATGGA TCGTGGTTCG CAACGACGGG GAACCCGATT CCATGATTAA ACTCGTTGGT CTCAAATCGC TCTTTTCGAA GCAGTTACCC AAAATGCCGC GGGCATATAT TGCCCGTCTT GTGTTTGACC GCCGTCATAC ATCCTTGGCT ATTCTCAACG ATAATCCCGA CGTGAAAGAT TCCGACGAAG AAATTATTGG CGGTATTTGC TACCGTGCTT TTCCGGAAAT GCGTTTTGCC GAAATTGCTT TTTGTGCCGT TAATGCGTCC CATCAAGTCA AAGGATACGG CACCAAGCTT ATGAACTTGC TCAAAAAGAT TGGCGCCGAA ACCGGAATCG AATATTTCAT TACGTACGCC GACAACTACG CCATTGGCTA CTTCAAAAAG CAAGGGTTTG CCAAGAATAT TTCCATGCCC AAGGGTCGAT ACTTTGGCCT AATCAAGGAC TATGACGGTG GCACACCGAT GGAATGCTAC GTCCATCCCT CTATTGATTT TACCCGCGTT CCGGAAATGC TGCAGGCGCA ACGGAATTTT ATTCTCGCGC AAGTGAGTCG CGTCGCCAAG AGCCGGATCG TGTACGAGCC GTTGTCGTCG TGGCGAGACG CGAGTGAGGA AGGATCCTTG GCAACAGCGA ATTCACGCGT CCCGGGCTTG ACGGCGACAC CGGTGGGGAC GTCCGCGAAC GCCACAGCCG TTAGCTTATC ACGGTCCAAT CAAGCGGCCG CCCGCGCGTT GGCCATTCCC GGGATTGCCC AGGCCGGTTG GACGTTGGCC GATTTGACCA CCGCCAGTGG ACAAGGCAAG GAAGCGGATC GTCAGAAGAG TGCCCTCAAA ACTACGCTGT TGGCAATGTT ACGGAAAATT GAAGAGCAGC AATTTGCGTG GCCTTTCCGG GAGCCCGTAG ATCTGACGGA AGTTCCGGAT TATTTGCAAG TCGTGACGAC CCCGATTGAC TTGTCGACAA TGGAAAAGCG GATCCGGGCC GATCTGTACC GGTCCAAGCA AATGGCGTTT GCCGATCTAA TGCTCATGGT GAACAACTGC AAATTATACA ATGACGACGG AAGCCCGTAT ATGGAGTGTG CGACTAGTTT GGAACGATAC GTGAAGAATC TC
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Protein sequence | LRWIVVRNDG EPDSMIKLVG LKSLFSKQLP KMPRAYIARL VFDRRHTSLA ILNDNPDVKD SDEEIIGGIC YRAFPEMRFA EIAFCAVNAS HQVKGYGTKL MNLLKKIGAE TGIEYFITYA DNYAIGYFKK QGFAKNISMP KGRYFGLIKD YDGGTPMECY VHPSIDFTRV PEMLQAQRNF ILAQVSRVAK SRIVYEPLSL SRSNQAAARA LAIPGIAQAG WTLADLTTAS GQGKEADRQK SALKTTLLAM LRKIEEQQFA WPFREPVDLT EVPDYLQVVT TPIDLSTMEK RIRADLYRSK QMAFADLMLM VNNCKLYNDD GSPYMECATS LERYVKNL
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