Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_28237 |
Symbol | SMC6 |
ID | 7204555 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 530042 |
End bp | 530822 |
Gene Length | 781 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185720 |
Protein GI | 219120977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.359759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCCTCCAGT CTCAACGGAT CGACTCGTCT TGATTCGATC ATGACGCCCT CCATAAAGAA ACGCTCGTCC GAGGCGTCGG AACTCGACGC CGAAGCAGCA GTCCCCAAAC GTCAAGCCAC GGAGAAGGAG AACCAGGCCG ATCCCAACGC CGGAGTAGAG GACGACGTCG CAGAAACCTT GGCTTCCCCC AAAAAGGCAA TCAATGTTGT GGGTCAGCCT CCGGAAGCCG GAATCATCAA AGAAGTTTAC GTGGAGAATT TCATGTGTCA CCCAAAACTG CGGGTTACGC TTTGTCGGAA CGTGAATTTT ATTCACGGCC AGAATGGGTC GGGCAAGTCC GCCATTCTGG CCGCCATACA AATATGTCTG GGGGCGTCCG CGTCGCGCAC CCACCGCGCC AGGAATCTCA AGGGACTGGT GCGGAAGGAC GCTGGCCCTA ACGCGACTGC CAAAGTGCGG GTGACGCTCT GGAATCAAGG CAACGACGGT TACCTGCCAG AAACCTACGG TGATTCGATT ACTGTCGAGC GAACGATCTC GCTACGGGGC GGATACAACG GCTACAAACT ACTGGATCAC AACGGCAAGG AACGCTCGCG CAACAAGAAA GATTTGCACG AAATGTTGGA CATGCTGTAA GTGTTCTAAC GAAGCGACGG ATGTGTCTGT ACTAATGGAT TCATAGGCTG ACACACCCGT TTTGAAATTT ATCAGAAACA TTCAAGTCGA AAACCCCGTT GCCGTCTTGG ACCAGGACGA AGCCAAAAAA TTTCTTACCG G
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Protein sequence | MTPSIKKRSS EASELDAEAA VPKRQATEKE NQADPNAGVE DDVAETLASP KKAINVVGQP PEAGIIKEVY VENFMCHPKL RVTLCRNVNF IHGQNGSGKS AILAAIQICL GASASRTHRA RNLKGLVRKD AGPNATAKVR VTLWNQGNDG YLPETYGDSI TVERTISLRG GYNGYKLLDH NGKERSRNKK DLHEMLDMLN IQVENPVAVL DQDEAKKFLT
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