Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_28222 |
Symbol | |
ID | 7204542 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 457005 |
End bp | 458167 |
Gene Length | 1163 bp |
Protein Length | 316 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | transaldolase |
Protein accession | XP_002185708 |
Protein GI | 219120953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.562417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCAATAGGA CATAACACAA CCAGTTTCAT ATTCGACAAC ATTACTAATC ACACGAACAA ACAACCGAAG CACCATGTCG AATCAGTACG AGCAATTGAA AGAGTTTACG ATCTGCGTTG CGGATTCAGG CGATGTCGAT GCGATCAAAG AGCTGAAGCC CCAAGATGCG ACAACAAATC CTTCCCTCAT CTACAAAGCG GCTCAGATGG ATCAATACGC CAAGCTGGTA GATGATGCTA TCAAGTACGG AAACGGAAAC CTAGAAATCG TCATGGTAGG TAATAGCGTT TGGTTTTGTC GAAGCATAGC CCTATTGTGG AAACCTTCTC ACAATGAAAT TCTTTTTTGT TTTTTAAGGA TAAACTGGCC GTTAACTTTG GGACAGAAAT CACCAAGATC GTGCCAGGAT ATGTCTCCAC GGAAGTTGAT GCGCGCCTTT CCTTCGATAC TGAGGCAACT ATCGAAAAGG CCCGTAGCAT CATTCAGCTG TACAAGGAAG TCGGTGTTGA CAAATCTCGA ATCCTAATTA AAGTCGCTGC TACTTGGGAA GGAATCAAAG CGGCCGAAGT TTTGGAGAAG GAAGGAATCA CTTGCAACTT AACCTTGATC TTTAGCATTG CGCAGGCTAT TGCCTGTGCC GAAGCGGGCT GCACCTTGAT CAGTCCTTTT GTTGGGCGAA TCATGGATTG GTACAAGAAG GATCAAGGAG TTGATGGGTT TGAGCCAAAA GAGGACCCAG GTGTTATTTC TGTGACAAAA ATTTACAACT ACTACAAGAA GTACGGATTT AATACTATCG TAATGGGTGC ATCCTTCCGT AATGCCGGGC AAATTACTGA GCTTGCAGGA TGCGACCGTT TGACGATTTC ACCTCCTCTT CTGAATGAGC TGATCGCGTC AGCGGACAAG TTGGAAAAGA AACTTGATGC TAGCAACGCC GCTACCTTGG ATATTGCCAA AGTCGATATG GATGAGAAAA CTTTCCGTTG GATGATGAAC GAAGATCCCA TGGCGACAGA GAAGTTGGCA GATGGTATCC GCAACTTCGC TGCCGACGTT GTGAAGCTCG AAGAGATTGT GAAGAAAAAG ATGTAAGCAA GCTGAGTCGC AGAATGCATC AACAGTTAAA AAGGTAGTAA TAACCGAAAT TTTCGGCTCT TCC
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Protein sequence | MSNQYEQLKE FTICVADSGD VDAIKELKPQ DATTNPSLIY KAAQMDQYAK LVDDAIKYGN GNLEIVMVGN SDKLAVNFGT EITKIVPGYV STEVDARLSF DTEATIEKAR SIIQLYKEVG VDKSRILIKV AATWEGIKAA EVLEKEGITC NLTLIFSIAQ AIACAEAGCT LISPFVGRIM DWYKKDQGVD GFEPKEDPGV ISVTKIYNYY KKYGFNTIVM GASFRNAGQI TELAGCDRLT ISPPLLNELI ASADKLEKKL DASNAATLDI AKVDMDEKTF RWMMNEDPMA TEKLADGIRN FAADVVKLEE IVKKKM
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