Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_21116 |
Symbol | |
ID | 7204556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 537399 |
End bp | 539011 |
Gene Length | 1613 bp |
Protein Length | 418 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185721 |
Protein GI | 219120979 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACACACACA CGTTGGGTTG GGGAAGGGAT CGGCATCGTT GTCCACCACG GGAACCGGCG TTCGCTTCCA CACAACACAA AATCTCACGG CTACCTCCTC CGATCCATTC GACAACCAAC CAATTGATTC CACCCATTGA TTCCAACCAA AGTAATTCAA ACCAACACAC TACACACTCA AACCCATCGA ACACATACAC ACCATGACCG ACGCCAAGCC CAAATTGCTC CTCGCCTATT CCGGCGGACT CGACACATCC GTCATTCTCA AGTGGCTTTC GGAAAAGGGA TTCGACGTGA TTGCCTTTTG TGCCAACGTC GGACAGCACG AGGAAGACTT TTCCGCCGTC AAGGCCAAGG CTGAATCCTG CGGAGCCACC AAGTGTGTCA TATCCGACCT CCGCAAGGAA TTCGTCGACG ACTACGTCCT CGAAGCCATC AAGTGCAACG CCATTTACGA AGGTCGGTAC TTGCTCGGCA CCTCCATTGC CCGTCCCTGC ATCGCCAAGG AAATGATCCG CATCGCGCAC GAAGAAGGGG CGACTTTTAT TGCGCACGGG GCCACCGGCA AGGGAAACGA CCAGGTGCGC TTCGAAATGT GCTGCCAGGC ACTCTCACCC ACCATTCAGT GCGTCGCTCC CTGGCGCGAC GCCGAATTCA TCGAATCCTT CAAGGGACGC AAGGATCTAC TAGCCTACTG CAACCAACAC CAAATTCCCG TTGACGCCAA ACCAAAGGCC AATTACTCCA TCGACGAGAA TCTATTCCAC ACTTCCTACG AGTCCGGAAT GCTCGAAGAC GCCATGTGCC CGCCCGACGA ATCCATGTTC AAAATGACCG TCTCTCCCCA GGCCGCCCCG GACCTGCCCG AAACGATCCG TATCGAATTC GATCAAGGAC TCCCCGTCAA ATTGACCAAC GTCACGGACG GTACCGAGAT CACCGACTCC CTTGAGTTGT TCTTGTACTG TAACACCATT GCCGGCAAAC ACGGAATCGG CCGCATCGAT ATCGTGGAAA ACCGCTTCGT CGGAATCAAG TCGCGGGGAG TCTACGAGAC ACCCGGTGGT ACGCTCCTCC GCGCCGCCCA CATGGACCTC GAAGGTATCA CCATGGACCG CGAAGTCAAA CGCATCGCCG AACACTTGTC CGCCGAATTC GCGCGTCTCT GCTACAACGG CTTCTGGTTC GCCCCGGAAA TGGACCTCGT CCGGTACAGT CTCGATTTCA CCCAGCGCGA CGTCGTGGGG GTCGTCGAAC TCGAACTCTA CAAGGGAAAC GTCACCATCC GGGGACGACA AAGCCCCAAG GCCCTCTACA ACGCCGACCT GGCCTCCATG GACATTGAAG GCGGCGGAGA CGCCTTTGAC TACAACCCGG CCGACGCCAA CGGATTCATC CGCATCAACG CCGTCCGCCT CAAGACCTAC GCCGCCCTCC GCGCCAAGGA CGGGAAATAG ATTCCTCACG CACGCACGCA CGCAACCCTC ACTCACGAGT CCTTTCTACA CACAAACACA CCCCTGTGAT TCACGGTGCG CGTAGACTAC GTGTCCACCC AGAGACTGCA GTTTGCCTTT AGATGAAATA ACATTTCGTA AATACAAATT ATT
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Protein sequence | MTDAKPKLLL AYSGGLDTSV ILKWLSEKGF DVIAFCANVG QHEEDFSAVK AKAESCGATK CVISDLRKEF VDDYVLEAIK CNAIYEGRYL LGTSIARPCI AKEMIRIAHE EGATFIAHGA TGKGNDQVRF EMCCQALSPT IQCVAPWRDA EFIESFKGRK DLLAYCNQHQ IPVDAKPKAN YSIDENLFHT SYESGMLEDA MCPPDESMFK MTVSPQAAPD LPETIRIEFD QGLPVKLTNV TDGTEITDSL ELFLYCNTIA GKHGIGRIDI VENRFVGIKS RGVYETPGGT LLRAAHMDLE GITMDREVKR IAEHLSAEFA RLCYNGFWFA PEMDLVRYSL DFTQRDVVGV VELELYKGNV TIRGRQSPKA LYNADLASMD IEGGGDAFDY NPADANGFIR INAVRLKTYA ALRAKDGK
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