Gene PHATR_20948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_20948 
Symbol 
ID7204578 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp94095 
End bp94758 
Gene Length664 bp 
Protein Length104 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185820 
Protein GI219121183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTTTGCCGA TCCATTCACA TACTGGACCC CCGTAGTCTT CCTCCTCTTC TCTTAACAAG 
TAACTAACTT ACGAACTAAC TACCACAGTT TCAATATGAG TGAAAAGAAG GGAGCCAAGA
TTTTCAAAAC CAAGTGTTCG CAGTGCCACA CTGTGGAAGA GGGTGGCTCG CACAAGCAAG
GACCCAATCT GTACGGTTTC TTCGGCCGAC AGTCTGGACA AGCCGACGGA TACTCCTATT
CCGCTGCCAA CAAGAAATCC GGTATTACCT GGGGGGAAGA TACGCTGTTT GAGTACTTGG
AGAATCCCAA AAAGTACATC AAGGTACGTC ATGTCTGCCG ATACAAAGAG ACGATTACTC
GGTTGGTCGG AGAGATACCG ACGAGAGTGC CAATCATACA AGTCTCGGTG GGAATTCTTC
AACGTTGTCC TGGCAGACGT GTGTTGTATC TGGTTTGGTG CGGAATCACT CACATCACAT
CCTATATTGA TTGTACTCTC CTCTTGTTGC CACTCGTACA GGGCACCAAA ATGATCTTTG
CCGGACTCAA GAAGGAAAAG GACCGCAAGG ACCTTATTGC CTACCTCAAG TCCACTTGCA
CTGCTTAGAA CAATACGATC TCTCTACAAT AACGTAAATA ACAAGTTTGG TTGTGCAGTT
GAAA
 
Protein sequence
MSEKKGAKIF KTKCSQCHTV EEGGSHKQGP NLYGFFGRQS GQADGYSYSA ANKKSGITWG 
EDTLFEYLEN PKKYIKGTKM IFAGLKKEKD RKDLIAYLKS TCTA