Gene PHATR_13526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13526 
Symbol 
ID7204741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp785175 
End bp786140 
Gene Length966 bp 
Protein Length321 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185951 
Protein GI219121455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGATCTTCCT CACTGCCGGC ACCTACCCTC CAACTCACCG GCCACGCGGG TTCCGTCTAT 
GCTCTCGCCT ACAGTCCGTC CGGTCAAACC TTGTGTAGCG CTAGTTTCGA CAAGACCTGC
TTGCTGTGGA ACCACGGCAC GTACGAAAAT TTCAAAACGC TGACGGGTCA CAAGAATGCC
GTCTTAGACG TCACTTGGTG TGACGAGGAT TGCATCGTCA CCGCCTCCGC TGACAAGGCA
GTGTTCGTCT GGGATGCGCT CACAGGGACA CGCTTGCGAC AATGGAAGGC ACACGAAGGA
GTGGTCAATG CAGTTGACTC CATAACGGAA CACACCGTCG TATCGGCGAG TGACGATGGA
ACCTGTCGCG TTTGGGATCG ACGACAAAAG TCGGCCGTAA TGACGTTACG AAACAATAGT
ACGAATCACG ACTCGGATAC AGCTGGTACT CCTTTACCGA TTACAGCGCT TGCTGCGACG
TCGACCCACG CGTATACGGG AGGGATTGAC AATCTCATTA CGTGCTGGGA TTTGAAAACA
CAACGGAAGC AATACGCTAT GAAAGGACAC GCGGACACCA TTACCAGTCT CGCTATGCAT
CCGGAAGAAA CGCACGTCCT CAGTAATAGC ATGGATAACA CACTACAAAG TTGGGATATT
CGTCCTTTTG TGACCGGCCC CAACCGACAC CACAAAACGT TTGTCGGCCA CAAACACAAC
GCCGAAAAGG GTCTCTTAAA GTGTGCTTGG AGCGGAAGCG CGGGTGGTGG TGGAGGCGGT
GGCAGCATGG TGACGGCCGG TTCTGCCGAT AAATTTGTTC ATGTATGGGA TGAGTTTTCA
ACCGAAGAAC TCTACCTTCT GCCGGGGCAT CAGGGCTGTG TCAACGTGGT GGCCTTTCAC
CCCGTTGAAA ACGTCGTCTG CTCGGGCTCC AGTGATAAAC AAATATATGT AGGGGAACTT
TCGTGA
 
Protein sequence
RSSSLPAPTL QLTGHAGSVY ALAYSPSGQT LCSASFDKTC LLWNHGTYEN FKTLTGHKNA 
VLDVTWCDED CIVTASADKA VFVWDALTGT RLRQWKAHEG VVNAVDSITE HTVVSASDDG
TCRVWDRRQK SAVMTLRNNS TNHDSDTAGT PLPITALAAT STHAYTGGID NLITCWDLKT
QRKQYAMKGH ADTITSLAMH PEETHVLSNS MDNTLQSWDI RPFVTGPNRH HKTFVGHKHN
AEKGLLKCAW SGSAGGGGGG GSMVTAGSAD KFVHVWDEFS TEELYLLPGH QGCVNVVAFH
PVENVVCSGS SDKQIYVGEL S