Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_13459 |
Symbol | SytB |
ID | 7204714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 644209 |
End bp | 644991 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185756 |
Protein GI | 219121049 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0504572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGCTT TTAACGGCAA ACCTTCCTGG GTTACTGATG TTGATCAAGT CGAGCAGTGT CTGGTCGATC TTCGTGCCCA AATGGAGGAT CTGCACAAAA TGCACGCATC CCGTGTCGGA TCGGTCTTTG GCAAAGACTT GGAAGATATG GAGGGCCGAA TCGAATCTCG AACTCGCGAA ATTACCGACC AGTTCCGAGT GGCCGAACGC ATTTTGCAAA AGGTAGGTGT GGCGACTCGT CGGGCGGGTG GAGAGGAAGC CACTGTCGGT GCCAACGTCC AACGGAGCCT CGCCAAGCGA CTTCAGGAGC TTTCCGTAAA TTTTCGACAG TCGCAGCGCA AATATCTGGC TGAAGTTAGG ACTCAGAAAA GTGGTGGGTT GGTTCCGGGT GCAGACAGTC GATTCGGCAT TGATTTGCAT ACAGAATCGT CGGGTGAATT CTTTACCACG CAACAACTAG CTGTCGTGGA TGACCTAACA GAGGCTGTAC AGTCTCGAGA TACTGAGATT GTAAAGATTG CACAGTCAAT TGAGGAGCTT GGAACAATTT TTAAAGAACT GGCGGTTTTA GTTATCGATC AAGGGACGAT TTTGGATCGC ATTGACTATA ATATGGAAGC GGTTGTGGAC CACACTAAGA CAGGCATCAA GCAACTCGAA AAAGCAGAGA AGCATCAGAA GAATGCTCGC CCATTACGAT GTATTATCTG CTTAAGCTCG TTAATATTTG TTCTTCTCGT AATTCTCGTT CTCAAACATC GGCCAAGGCG TGGTTGGTTT TAA
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Protein sequence | MEAFNGKPSW VTDVDQVEQC LVDLRAQMED LHKMHASRVG SVFGKDLEDM EGRIESRTRE ITDQFRVAER ILQKVGVATR RAGGEEATVG ANVQRSLAKR LQELSVNFRQ SQRKYLAEVR TQKSGGLVPG ADSRFGIDLH TESSGEFFTT QQLAVVDDLT EAVQSRDTEI VKIAQSIEEL GTIFKELAVL VIDQGTILDR IDYNMEAVVD HTKTGIKQLE KAEKHQKNAR PLRCIICLSS LIFVLLVILV LKHRPRRGWF
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