| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_13418 |
|---|
| Symbol | |
|---|
| ID | 7204486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 100216 |
|---|
| End bp | 101645 |
|---|
| Gene Length | 1430 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185626 |
|---|
| Protein GI | 219120789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGGAGTCGCG AATTCTCTCG TTCGGTGCTG CTCGTCTACG CTGCTGCACT CGTATTCTTT
ATGCAAGCCG GCTTCGCCAT GCTCTGTGCC GGAGCCGTCC GGAAAAAGAA CGTGCAGAAC
ACCATGCTCA AGAACTTGTT GGACGCCTGT GGAGCCGCCG TCGCCTTTTT CATCGTGGGC
TACGCTATAG CCTTTGGAGG CATGGAACCG GAATCGCCCA ACAAGACATT TCTCGGGAAC
ACCAATTTCT TTTTAATGGG AGTGGACGAT TTGGCCTTTT GGTTGTTCCA GTACGCCTTT
TCCGCTGCCT CTGCAACCAT CGTCGCGGGA ACTTTGGCCG AGCGCTGCCA AATGGTTGCC
TACTTGTGTT ACTCCGTAAT GTTGACGGGA TGGGTCTATC CGATTATCGC GCACGCGATT
TGGTCACCCA ACGGTTGGCT CTCCGCCAGT TCCGTGGATC CGCTATGGGG TGTCGGCATG
GTCGATTTCG CCGGCTCGGG AGTAGTGCAC ATGACTGGAG GCGTTACCGC CTTGTTCGCC
ACTCTCATAC TCGGACCTCG CCGTGGACGG TTTCACGATG AAACCGGACG CCGGCTCGAC
AAACCAAAAT CCTTTCCCGG ACACTCCGTG GCCTTGCAGG TACGCGGCAC ACATTACCAC
ACCTTGTACA GCCATACCTT GGTCGACCTG TCAGCCCACA CCTTACCCTA ATTCTGTACC
CGTTTATTCC TGCTTTTCTA TACTTCACTA TTCTACAGAT GCTCGGTACC TTCATTCTCT
GGTTTGGTTG GTATGGATTC AATTGCGGTT CGGCGTTACT CATCGACAAG CCCGGTGCTA
ACGATATTGC CGCCTTGGCG GGCGTCAATA CGACACTTTC TGCCGGAGTC GCTGGGATAG
TTGCACTCTT TGTCAACCTC TGGTACCTCG AGCGAACAAC CGGAGAACCT TTTTTTGATT
TGACCTACGC CATGAACGGA TCCCTTTCGG GTCTCGTGGC CATCACAGGA GGTTGCGCTG
TTCTCGAGCC CTGGGCGGCA GCGGTCACTG GAGTCGGTGC CGGTATCTTG TACATGGTTG
GATCACGAGG TTTGGTCATG TTGCGATTGG ATGACGCGGT TGACGCGATT CCCGTTCATT
TTGTGAACGG GGCCTGGGGT CTCATGTCGG TCGGATTGTT CGCGTCACCA GCACGCTTGC
TGGCCGCGTA CGACAACGAC GCTCATCCTG GATGGTTCTA TTCCCTACGA AACGGCAAAT
CGGACGGGCG TTTGGTTGGA GTTCAGCTGG TAGGCATTGT ATTTATCGTG GGATGGGTCA
TGGTGATTAT GTTGCCCTTC TTCATTTGGT TGGATTGGAA GGGATGGTTC CGGTCGGATC
CTTTGGAAGA AATTGTGGGA TTGGACACGT CGTACCACGG TGGTCTCGCT
|
|---|
| Protein sequence | GSREFSRSVL LVYAAALVFF MQAGFAMLCA GAVRKKNVQN TMLKNLLDAC GAAVAFFIVG
YAIAFGGMEP ESPNKTFLGN TNFFLMGVDD LAFWLFQYAF SAASATIVAG TLAERCQMVA
YLCYSVMLTG WVYPIIAHAI WSPNGWLSAS SVDPLWGVGM VDFAGSGVVH MTGGVTALFA
TLILGPRRGR FHDETGRRLD KPKSFPGHSV ALQMLGTFIL WFGWYGFNCG SALLIDKPGA
NDIAALAGVN TTLSAGVAGI VALFVNLWYL ERTTGEPFFD LTYAMNGSLS GLVAITGGCA
VLEPWAAAVT GVGAGILYMV GSRGLVMLRL DDAVDAIPVH FVNGAWGLMS VGLFASPARL
LAAYDNDAHP GWFYSLRNGK SDGRLVGVQL VGIVFIVGWV MVIMLPFFIW LDWKGWFRSD
PLEEIVGLDT SYHGGLA
|
|---|
| |