| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_13400 |
|---|
| Symbol | |
|---|
| ID | 7204600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 187768 |
|---|
| End bp | 188882 |
|---|
| Gene Length | 1115 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185648 |
|---|
| Protein GI | 219120833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACCGTGACC TCAAGTTTGA AAACATCATG TTTGAATCCA AACATCCCGA AGCGGCCATA
AAAGTAATTG ACTTTGGTTT ATCCAAGGAG TACTCACCTA ACAACCATAT TTTGACGGAA
CGTGTGGGGA CCCTCTACAG TATGTCGCCG GAAACATTAC AAGGCATTTA CACCAATCAA
GCTGACTTGT GGAGCATTGG AGTTTGTACA TACATGATGT TAGCGGCAGG GGATAAGCCT
TTCGAAGGCA AAACACCCAA GCAGTTGGTG GCTAAGATAT TGATGGGCAA ATATGATTTC
GAGGCGGAGG TATGGAAGGA TATTTCACCC GAAGCCATCT CTTTTATTCA CAGTCTATTG
GTTGTTCAAC CAGAGAATCG ATCATCCGCT ACGGACGCAA TGCGTCACGG TTGGTTGACA
CATGCCACCC GACAAAATTC GGATCACTCG TCCGTGGATG ATAACTTTCG GCAGCGCGTC
AAGCAAGGTA TTATTCGGTA TTCCAACCTC GGGGATTTTC GGAAACTTGC TCTCAATGTG
GTCGCTAAGA AGTCGACCTC CGCGGAGATT TTTGAGATAC GAAAAGTCTT TGAAGAGTTT
GATACAAATA ATACAGGAAC GATTACGCTG CCAGAGTTTA AGGCTGCATT GGAACATTTC
GACTATTCCG AAGGAGATCT TATGGAAATT TTTCGCAAAG TGGTACGTGC TACCACCACC
TTAGAGCGTC GATAACATCT CCGTTTTTCT AATACTTCGT TTGATCTGTT GTTTGTCGCA
CCGGGTAGGA CGTCAACAAG AACAATGTTA TCAACTTCAC AGAGTTTGTT GCTGCCTGCA
TAGAGACGCA AGGTCATATA GAAGAGCATC GTTTAGGTGA AGCGTTCGAT TTTTTGGACT
GCGACGACAG TGGATACATT TCAAAAAAAA ATTTGCGGCA CATATTGGGA GAACGCTGGT
ACGACTTGAA CAAAACGCCT TTCGTCTGGA AAGAAATAAG ACCTCGCTGA CTCTCAATTT
CATTCTTTCT CTGTAGCAAT GATCAATACA TTGATTGTTT AATTCGCGAA GCGGACTTCA
GAAAGGACGG CCAAATAAGT TATGAAGATT TCTTA
|
|---|
| Protein sequence | HRDLKFENIM FESKHPEAAI KVIDFGLSKE YSPNNHILTE RVGTLYSMSP ETLQGIYTNQ
ADLWSIGVCT YMMLAAGDKP FEGKTPKQLV AKILMGKYDF EAEVWKDISP EAISFIHSLL
VVQPENRSSA TDAMRHGWLT HATRQNSDHS SVDDNFRQRV KQGIIRYSNL GDFRKLALNV
VAKKSTSAEI FEIRKVFEEF DTNNTGTITL PEFKAALEHF DYSEGDLMEI FRKVDVNKNN
VINFTEFVAA CIETQGHIEE HRLGEAFDFL DCDDSGYISK KNLRHILGER CNDQYIDCLI
READFRKDGQ ISYEDFL
|
|---|
| |