Gene PHATR_13361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13361 
Symbol 
ID7204713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp641389 
End bp642558 
Gene Length1170 bp 
Protein Length389 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185755 
Protein GI219121047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTCATCGTA AGTTCGAAGC TCCCCGTCAC GGAAGTTTGG GTTTCTTGCC CAAGAAGCGT 
ACCAAGTACC ACAGTGGTCG CATCCGCTCT TTCCCCCGGG ATGACGCCGC GGAACAGCCC
CATTTGACCG CTTTTCGTGG TTACAAGGCC GGTATGACCC ATGTTGTTCG TGGTGTTGAC
CGTCCTGGTG CTCTCATGCA TAAGCGCGAA GTGGTGGACG CTGTTTCTAT TGTTGAGACA
CCTCCTATGG TAGTTGTCGG TGTCGTTGGG TACGTCGAAA CTCCCAGTGG TCTCCGCACC
TTGACGACTG TTTTTACCGA GCACTTGAGT GAGGAATTCA AGCGTCGTTG CTACAAGAAC
TGGTACAACA GTAAAAAGAA GGCATACACC AAGTATGCTC TCAAATACCA GAAGGATGGT
GGTAAGGATA TTGAGAATGA GCTTGAGCGC ATCAAGAAGT TCTGCTCCGT CGTTCGTGTT
ATTGCCCACT CTCAGGTCAA GAAGCTTAAC TTGCGCATTA AAAAGGCGCA CATTATGGAA
ATTCAGGTGA ATGGAGGTGA CACCGCTGCG AAGGTCGATT TTGCCAAAAA CTTGTTTGAA
AAGGAAGTCA CGGTCGACAG CATCTTCGCT AAAGACGAAC AGATTGACGT TCTTGGAGTC
ACCAGAGGGC ACGGATACGA AGGTGTGACT ACACGTTGGG GTGTCAGCCG TCTGCCTCGT
AAGACTCACC GTGGTTTGCG TAAGGTAGCT TGTATCGGAT CCTGGCATCC TGCCCGTGTG
TCTACCACCG TCCCCCGTGC TGGTCAGAAC GGATACTTTC ATCGTACGGA AATGAACAAG
AAGGTGTACC GTGTCGGTAA AAAGGGTGAC GAAGCTAGTT GCCAGACCGA TGCTGATCTG
ACCAAGAAGT CGATCACGCC GATGGGTGGA TTTGTGCACT ATGGTGAGGT CAAGGAAGAC
TGGCTCATGC TCAAGGGTGC CATCGTTGGG GTCAAGAAGC GCCCTTTGAT CCTTCGAAAG
TCCTTGATGA AGCATTCTTC ACGCAAGCAT TTGGAGAAGA TCGATATCAA GTTCATCGAT
ACTTCTTCCA AGCTTGGACA TGGTCGTTTC CAGACTGCCG AAGAAAAGGC CAAGTTCTTG
GGCCCTTTGG CTTCCAAACA GAACCAATAA
 
Protein sequence
SHRKFEAPRH GSLGFLPKKR TKYHSGRIRS FPRDDAAEQP HLTAFRGYKA GMTHVVRGVD 
RPGALMHKRE VVDAVSIVET PPMVVVGVVG YVETPSGLRT LTTVFTEHLS EEFKRRCYKN
WYNSKKKAYT KYALKYQKDG GKDIENELER IKKFCSVVRV IAHSQVKKLN LRIKKAHIME
IQVNGGDTAA KVDFAKNLFE KEVTVDSIFA KDEQIDVLGV TRGHGYEGVT TRWGVSRLPR
KTHRGLRKVA CIGSWHPARV STTVPRAGQN GYFHRTEMNK KVYRVGKKGD EASCQTDADL
TKKSITPMGG FVHYGEVKED WLMLKGAIVG VKKRPLILRK SLMKHSSRKH LEKIDIKFID
TSSKLGHGRF QTAEEKAKFL GPLASKQNQ