| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_13265 |
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| Symbol | CHLH |
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| ID | 7204596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 162586 |
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| End bp | 166617 |
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| Gene Length | 4032 bp |
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| Protein Length | 1343 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | protoporphyrin IX magnesium chelatase, subunit H |
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| Protein accession | XP_002185833 |
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| Protein GI | 219121210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGGTG GTATGTTTAC CAGGAGCAAT TCGGAATCTC GTCGGGTCGT TCCGGAAGAC
CCTCGTGGAA GACCCACCAT GAAGGTCGTT TATGTGGTGC TCGAATCGCA GTACCAATCT
TCCATGACGG CTGCCGTCAA GCGAATCAAC GCGGGATCGG ACAATATGGC CGTCGAATGT
GTTGGTTACT TGCTAGAGGA ACTCCGCAAC GAAGACGCCT TTGAGCAGTT CAAAAAGGAT
GTGGCCGACG CCAATATTTT CATCGGCTCC CTCATTTTTG TGCAGGAGCT CGCCGAAAAG
GTCGTCGAGG TAGTAGAACC CCAACGGGAA CGTCTCGATG CCTGTCTCGT TTTCCCTTCC
ATGCCGGAAG TCATGCGTCT TAATAAGGTG GGAACCTTCA CTATGAAAAA CTTGGGACAG
TCCAAGAGTG TCGTGGCTGA TTTCATGAAG AAGAAGAAGC AGGAAGATGG TTCCAGTTTT
GAGGAAGGAA TGTTGAAGCT CCTGCGTACC CTTCCCAAGG TTTTGAAATT TCTTCCCAGT
GACAAGGCCG CGGACGCGCG TACCTTTATG ATGAGTTTCC AGTACTGGCT CGGGGGATCC
CCAGAAAATC TCGAATCTCT CCTGATCCAA ATCGGACAGG ATTACGTCGC CCCCATCCAA
GAATCTATGA AGGGAAAAGA CAAGGTCAAA GCGGAGGACC CCGTCTTGCT ACCTGACAAG
GCCATTTGGC ACCCGGTTGC TCCCGATATT GTGTTTGAAA ACAATCAAAA GTACTTTGAA
TGGTACAACA ACGAATTCTG CCCCGACGCC GGTATCGACC CCAAAACGGC CCCAACGATT
GGTATTATCC TCCAAAAGTC CCACATTAAC ACCAAGGACG ACACACACTA CGTTTCGCTC
ATTTCCGAGC TCGAAAGCCG TGGCGCCCGT GTCGTTTCCA TCTATTCGGG AGGTTTGGAT
TTTTCCGGAC CTGTCGAGGA ATACTTTTAT GATTCCAATG GCAAGCCGAT TGTGGACACT
GTCATTAACT TGACTGGGTT CGCCCTCGTC GGAGGACCGG CTTCGCAGGA TCACGCCAAG
GCTTCACAGG TTCTCAAAAA GTTGAATCGT CCGTACATGT GCGCTGTGCC CCTAGTCTTC
CAGTCGTTCG AGGAATGGCA GTCATCCGAA CTCGGACTCC ATCCGATTCA GGTTGCTCTG
CAAGTGTCTT TGCCCGAAAT TGATGGAGCT ATCGAACCCA TTATTTTCGC TGGTCGCGAA
GGTGCTACGG GACGTAGTGT TCCGCTCGCC GATCGTGTCA ACCTTTTGGC CGATCGGTCT
CTGAAGTGGG CCAACCTCCG CTCCAAGCCA AAGTCTGAAA AGAAGATTGC CATAACCATC
TTCTCCTTTC CTCCGGACAA GGGCAATGTT GGAACTGCCG CCTACCTGGA TGTTTTTGAT
TCCATCAAGG CTGTTTTGGG ACAGCTCAAA TCGGAAGGAT ACGACGTAGG TGACGCTCCC
ATGAACAAGG AAGCCATCAT GGCTTCCGTC CTGGACGATC CCGAAGCAAA AATTTCTTCA
CCCGAGCTCA ATGTTGCGTA CCGCATGAGC ACCGAAGAAT ATTACGAGTT GACCCCGTAC
GCGACGGATT TGGAGGAAAA CTGGGGACCG GCACCTGGTA ACCTCAACTC GGACGGTCAA
AACCTGGTAG TGTACGGAAA GCAGTTTGGC AACGTCTTTA TCGGTGTCCA GCCTTCCTTT
GGATATGAGG GCGACCCGAT GCGATTGCTT TTCGCCAAAT CCGCGAGCCC CCATCACGGC
TTCGCCGCAT ACTATACGTA CTTGGAGAAA ATCTTCCAAG CCGACGCTGT TTTGCATTTC
GGAACGCACG GATCTTTGGA ATTCATGCCA GGCAAGCAGG TAGGTATGTC CGGCACCTGC
TACCCCGATC GTCTGATTAA CTCGCTGCCA TCCGCCTACT TGTACGCTGC CAACAACCCG
TCAGAAGCCA CGATTGCCAA ACGTCGCTCG TACTCTGCTA CAGTCTCGTA CCTGACGCCG
CCGGCGGAGA ACGCCGGTCT CTACAAGGGA CTGAAGGAAC TAAAAGAGCT CATCGCCTCT
TTCCAGGGTC TACGCGGAAA CGAAGGACGC GGCGCCGCTA TTGTCAACTC TATTGTCTCA
ACCGCCTGGA CCTGCAACTT GGATAAGGAC ATTGATCTTC CCAGTCTCGA AACGTACGAT
GCCGCCAAGG ACACTGCCGA AAACCGTGAC AGTATTGTGG GACAAGTTTA TTCTCAGATT
ATGCAGATCG AAAGCCGTCT CCTCCCTTGT GGCCTGCACA CTGTTGGGGT GCCACCGACC
GCTGAAGAAG CCATCGCGAC CTTGGTTAAC ATTGGTCAGC TCGATCGACC GGAAGACAAA
ATTGAAGGAC TTCCTCGGGT GATTGCCTCA TCGGTTGGTC GTGAGATCAA CGAAGTCTAC
CGTGGGAACA ACCAAGGTGT CCTAACGGAT GTCGAGCTAA ACGAGAAGAT CGTTATGGCT
TCCCGTGCTG CTGTCCGCGC CTTGGTTATG CAATCAACCG GCTCTGACGG ACGTGTCAAG
GAAGTCAAAT CCGCCTTTGA CGAAATGAGT GCCATGTTTG GAAAGATGAT GGGTCAGAAA
AAGCCCTGGA CAAAAGCAAT TATTGATGCC GGTTTCCCCG ATGTGAACGA GGCTCGCCTT
GACCCTGTTA TCACATATCT TGAGTTCTGC CTCAAGCAAG TTGTGGCAAA CAATGAACTC
GGAGGAATAA TGGAGCTTTT GAACGGAGAG TTTTTGATGC CCGCCCCTGG TGGCGACCCT
ATCCGCAACC CTGCAGTCCT ACCTACTGGA CGCAATATGC ATGCACTTGA TCCATCCTCT
ATTCCCACAG CAGCTGCTGT AGAAGTTTCG CAGGACGTTG TTCGAAAACT TCTCGAAAAG
CTTCGGGACG AGAACGATGG TGCCTTCCCC GAAAGTATTG CCTTTACTTT GTGGGGTACC
GACAACATCA AGACCTATGG GGAATCGCTC GCGCAGGTGC TCGCTCTAGT CGGTGTCCGC
CCGGTTGCTG ATTCTCTTGG ACGCGTCAAC AAGGTCGAAC TTATTCCTTT GGAAGTCCTT
GGACGTCCCC GTATCGACGT TGTCGTTTCA TGCTCCGGTG TCTTCCGTGA TCTTTTCATC
AACCAAATGA ATTTGATGGA TCGTGGAATC AAAATGGCTG CCGAAGCTGA TGAACCTTTA
GAAATGAACT TTGTCCGGAA ACACGCGATG GAGCAAGCCG AAGAACTCGG AGTCTCACTC
CGTGACGCCG CCGCTCGCGT CTTCTCGAAC TCTGCCGGAT CATACAGTGC TAACGTAGGC
CTCGCCATTG AGAATGGTGG ATGGGAAGAT GAAGGCCAGC TTCAGGAGCA GTTCTTGACG
CGCAAGGGCT TTGCGTTTAA CGCCGATAAG CCTGGTATGA TGGAACAGCA GGCTGCTCTT
TTCAAGAGCG CTTTGAAGAC TGTTGACGTT ACCTTTCAAA ACTTGGACTC GTCTGAAATT
TCGATTACCG ATGTTTCGCA CTACTACGAT TCTGATCCTA CTAAGGTTGT CCAAGGTCTC
CGTGACGATA AAAAGAAACC CATGTCGCTT ATGGCTGATA CCACCACCGC CAACGCTCAA
GTCCGTACAT TGTCCGAAAC CGTTCGACTC GACGCCCGTA CTAAGCTATT GAATCCGAAA
TTCTACGAAG GTATGCTTTC GACAGGATAT GAAGGTGTCC GTGAAATCCA GAAGCGTCTC
CGCAATACTA TGGGATGGTC CGCGACCGCC GGCGAAGTCG ATAACTTTGT ATTTGAGGAC
GCCAACAGCG TGTTTATTGA GGATGCCGAG ATGCAAAAGC GTCTTCTCGA CACGAATCCC
AACGCTTTCA GAGATATGGT GACCACATTC TTGGAAGCGA ATGGTCGCGG ATACTGGGAC
ACGTCGGATG AGAATATTGA GCGTCTTCAG GAGCTGTATG CGGAGGTGGA AGACCGCATC
GAAGGTGTAT AA
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| Protein sequence | MGGGMFTRSN SESRRVVPED PRGRPTMKVV YVVLESQYQS SMTAAVKRIN AGSDNMAVEC
VGYLLEELRN EDAFEQFKKD VADANIFIGS LIFVQELAEK VVEVVEPQRE RLDACLVFPS
MPEVMRLNKV GTFTMKNLGQ SKSVVADFMK KKKQEDGSSF EEGMLKLLRT LPKVLKFLPS
DKAADARTFM MSFQYWLGGS PENLESLLIQ IGQDYVAPIQ ESMKGKDKVK AEDPVLLPDK
AIWHPVAPDI VFENNQKYFE WYNNEFCPDA GIDPKTAPTI GIILQKSHIN TKDDTHYVSL
ISELESRGAR VVSIYSGGLD FSGPVEEYFY DSNGKPIVDT VINLTGFALV GGPASQDHAK
ASQVLKKLNR PYMCAVPLVF QSFEEWQSSE LGLHPIQVAL QVSLPEIDGA IEPIIFAGRE
GATGRSVPLA DRVNLLADRS LKWANLRSKP KSEKKIAITI FSFPPDKGNV GTAAYLDVFD
SIKAVLGQLK SEGYDVGDAP MNKEAIMASV LDDPEAKISS PELNVAYRMS TEEYYELTPY
ATDLEENWGP APGNLNSDGQ NLVVYGKQFG NVFIGVQPSF GYEGDPMRLL FAKSASPHHG
FAAYYTYLEK IFQADAVLHF GTHGSLEFMP GKQVGMSGTC YPDRLINSLP SAYLYAANNP
SEATIAKRRS YSATVSYLTP PAENAGLYKG LKELKELIAS FQGLRGNEGR GAAIVNSIVS
TAWTCNLDKD IDLPSLETYD AAKDTAENRD SIVGQVYSQI MQIESRLLPC GLHTVGVPPT
AEEAIATLVN IGQLDRPEDK IEGLPRVIAS SVGREINEVY RGNNQGVLTD VELNEKIVMA
SRAAVRALVM QSTGSDGRVK EVKSAFDEMS AMFGKMMGQK KPWTKAIIDA GFPDVNEARL
DPVITYLEFC LKQVVANNEL GGIMELLNGE FLMPAPGGDP IRNPAVLPTG RNMHALDPSS
IPTAAAVEVS QDVVRKLLEK LRDENDGAFP ESIAFTLWGT DNIKTYGESL AQVLALVGVR
PVADSLGRVN KVELIPLEVL GRPRIDVVVS CSGVFRDLFI NQMNLMDRGI KMAAEADEPL
EMNFVRKHAM EQAEELGVSL RDAAARVFSN SAGSYSANVG LAIENGGWED EGQLQEQFLT
RKGFAFNADK PGMMEQQAAL FKSALKTVDV TFQNLDSSEI SITDVSHYYD SDPTKVVQGL
RDDKKKPMSL MADTTTANAQ VRTLSETVRL DARTKLLNPK FYEGMLSTGY EGVREIQKRL
RNTMGWSATA GEVDNFVFED ANSVFIEDAE MQKRLLDTNP NAFRDMVTTF LEANGRGYWD
TSDENIERLQ ELYAEVEDRI EGV
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