Gene PHATR_13243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13243 
SymbolMCM7 
ID7204498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp237860 
End bp239716 
Gene Length1857 bp 
Protein Length618 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185663 
Protein GI219120863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGTG CTTCGCTCCG CGACGTGCGA TCCCGCTCCA TGGGTCGTCT CGTCACCATT 
CGCGGCATGA TCGTCCGGGC TTCTGACGTG AAACCCTCCT GCGTCGTGGC GACCTATTCC
TGCGATGCCT GTGGCATCGA AGCCTACCAG GTCGTCCAGG GTAAACGCGA GTTTATGCCT
CCCAAATCGT GCCCGTCGCC CCGTTGTCAA CAACACTCCC GGCAAAAGGA AACCCTGCAC
CTCCAAACTC GCGGATCCAA GTTTGTCAAG TTTCAGGAAC TGAAACTCCA AGAACTGCCC
TCACAAGTGC CCATGGGGCA CGTGCCGCGT TCTATGAGTG TCTATGCCCG GGGTGAATTG
ACCCGCTTGA CCTCGCCGGG GGATGTGGTT ACCCTAGACG GCGTCTTCTT GCCGCAACGA
GTCGCCGAAA GCGGTTATCG TGCCATGAAG GCCGGCTTGA TTTCCACCAC GTACCTCGAG
GCGCAGAACA TTCTCGTCCA CAAGAAATCG TACGACGAAT CGTTACTGGA TAGTCTGCCC
GAAGAAGAAA GTATCAAGCT AGATAAGGAA ATTATGGACG TGGCGACTGG GGACGACCCG
ATCGGTCGCT TGTCGTCTTC GTTAGCGCCC GAGATTTTTG GACACGAAGA CATCAAACGG
GCGCTCTTAT TACAGCTAGT GAGTGGCTGC ACACGGACAC TACCTGACGG AATGCGGATT
CGTGGGGACA TTAATATTTG CCTCATGGGT GATCCGGGAG TCGCTAAGTC GCAGTTGCTC
AAGCACGTGG CGTCGATTGC GCCGCGGGGA GTCTACACGA CAGGCAAGGG GTCGTCCGGT
GTGGGGCTGA CGGCCGCGAT TACCAAAGAC ATGGCCACTG GCGAAATGGC CCTGGAAGGG
GGCGCCTTGG TCCTAGCGGA CCGTGGCATC TGCTGCATTG ACGAATTCGA TAAAATGGAT
GAGAGCGATC GTACCGCCAT TCATGAAGTC ATGGAGCAGC AGACGGTCAG TATCGCCAAG
GCCGGTATCG TAGCGACCTT GAACGCGCGA GCGGCCGTAC TCGCGGCGGC GAATCCTCTG
TACGGGCGCT ACAACCGCTC CAAATCGCTA TCGGAAAATG TTAATTTGCC AAATTCGTTG
CTCAGTCGCT TCGATTTGCT GTTTCTGGTT TTGGATATTG CCGATGTGGA CAAGGATATG
GCTTTGGCTC GGCACGTTAC TTTTGTCCAT CAAAATGAAG GCGTCAGCGT CAACGGAACT
GATAACGGAA ACACTAATAG CGAGGACGAT AAGCATTCTG TTTGTACACC TCAACTCCTC
CGCGAATACA TTGCCCGCGC ACGGCGTCAT CAGCCGGTCA TGCCACCGGA AGATGCGCCA
TACGTTGTGG AAGCCTACGT TTCGCTTCGA ATGCAAGATC GTCCAGGTGC ACGCGGTAGT
CAGAAACAAA ATGATCAAAC GGTCATGACC GCGCGTCAGC TGTTGTCGAT TTTGCGATTG
AGTCAAGCCC TCGCACGTTT GCGCTTCTCG GATTATGTGG CCCGGGAGGA TGTGGACGAA
GCGATTCGTT TGACCCATAT GAGCAAGGCC AGTCTCCTGG ATGAGGATCA CGACGACGGC
ACCGGTCGAA AGCGTGGTCG TGGCGAGGAC GTCATGTCAC GAATTTTTCA CATCATTCGT
GACTATTCTT CTGTTTCAGG CTCGAAAGAA GTAGAACTCA AGCTTGCCGA GGCCATGGTT
CTGCGCAAGG GTTTTACGAC TCAGCAACTG CAGACATGCT TGGAGGAGTA CGAAGCCTTG
CAAGTAATTC AGATCAATCG TACCAGAACG CATATCTACT TTATCGACGG CATGTAA
 
Protein sequence
MEGASLRDVR SRSMGRLVTI RGMIVRASDV KPSCVVATYS CDACGIEAYQ VVQGKREFMP 
PKSCPSPRCQ QHSRQKETLH LQTRGSKFVK FQELKLQELP SQVPMGHVPR SMSVYARGEL
TRLTSPGDVV TLDGVFLPQR VAESGYRAMK AGLISTTYLE AQNILVHKKS YDESLLDSLP
EEESIKLDKE IMDVATGDDP IGRLSSSLAP EIFGHEDIKR ALLLQLVSGC TRTLPDGMRI
RGDINICLMG DPGVAKSQLL KHVASIAPRG VYTTGKGSSG VGLTAAITKD MATGEMALEG
GALVLADRGI CCIDEFDKMD ESDRTAIHEV MEQQTVSIAK AGIVATLNAR AAVLAAANPL
YGRYNRSKSL SENVNLPNSL LSRFDLLFLV LDIADVDKDM ALARHVTFVH QNEGVSVNGT
DNGNTNSEDD KHSVCTPQLL REYIARARRH QPVMPPEDAP YVVEAYVSLR MQDRPGARGS
QKQNDQTVMT ARQLLSILRL SQALARLRFS DYVAREDVDE AIRLTHMSKA SLLDEDHDDG
TGRKRGRGED VMSRIFHIIR DYSSVSGSKE VELKLAEAMV LRKGFTTQQL QTCLEEYEAL
QVIQINRTRT HIYFIDGM