Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_13232 |
Symbol | |
ID | 7204685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 577877 |
End bp | 579394 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185733 |
Protein GI | 219121003 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.827246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAATT TTGCGGATGC GAAAATTGCG TATGCGACAC AGTCCAACAT GGAGCTGGGT AGGGCGCTTT TGTCCTTCAG TCTGTGCCAA ATCAAGACAC TGGTTAAGTA CGCCAATCCG CTCCTCACTC TATCAAGGTT CTTGCTGGGT GATCGTTTTA CGGACGCTGC TCTCAAGGCT ACCCTGTACG GACATTTCGT AGCTGGTGAA GATGAAGTGC GTATCCAACC GAAAGTGCGC GTTCTGGAAT ACGCAGGCAT CGGTAGTATT TTGGACTACG CTGCTGAAGA AGAAGGTCAA GGGGTGGTGA CCCCGGCAAC ATCTGTCGAT CCTGCTTCAC AACCAATCGC ACGTGTCTAC GATTACACGT GCGAAGCCAA GTGCGATCGT CACTTGGAAA CGTTCAAGAG TTGCATACAA GCAGTTGCCA ATCTCGAAAA AGATGGGTAC GCTGCCGTCA AAATTACGGC TTTGACGAAT CCAGATCTAC TCGAACGAAT GTCGAAAGCT ATCGTGGAAG CCCGTAACTT GTTTGCCAAG TTCGATTCCA ACGGCGACGG CATGATCAGT CGACACGAGT TCGCTCAAAC TTTCCGAGTC TTTTTCAAGG GCGAAGATAC CAAGCTGTCC AACATGTTGG AAGAATTACA ACCTGACCAG AACGGAAATG TCGACTATAT TATGTGGTCC ATGATGCTTG CTCCTGGCGA TCTGCCACGA ATCTGTGCGG GCTGCCGTGA GGTAGGCCCT CTGGCACTTG CCGCACCCAC AGACGAAGAG GTTGAGCTCA TCGAATCAAT GTTCCGACGA GGCCACGCTC TAGCGCAGGA AGCGGCTCAG TGCGGCTCCT CCGTTCTCAT CGACGCTGAA CAATATCGCT ACCAACCGGC TATTGATAAC CTTGTTTTGG ATTTGCAACG CACGTTTAAC GCGACAAGTG AATCCAAGTT TCCTATCGTA TACAATACTT ACCAATGCTA TTTGAAAGAT TCCATGGAGC GTCTCAAAAC AGATTTGGAA CGTTCGGAAC GTTTTGATTA CCACTTTGGT GCTAAACTCG TTCGTGGTGC TTATTTGGAG AGTGAACGAG AACTGGCAGA AAAGGCCAAA GTTCCCAGTC CAGTCTACAC AGAACTCGAA GAGACGCATC AGTGCTACAA TGAAGCTGTC GAATTTTTGT TGGAATACTC GACACAGTCT AATAAGAAGG TCGAACTCAT GCTGGCGACG CACAACCAAG AGTCGATAGA GAAGGCAATC GAGGTCATGA ATCGGCTCGG CGTTCACCGT CAAGACTCAA CCGTGAGCTT TGGACAGCTG CTGGGAATGG CGGACCATCT CTCCTTCAAT CTGGGTCGCC ACGGCTACCG CGCGTACAAG TATGTACCGT ACGGTGAAGT TAAGGAAGCC ATGCCATATT TGATCCGTCG AGCCAACGAA AACAGCTCTC TGGCTGGCGG AGCCTCTCGA GAAATGGCAA TGATTGGCCA AGAGCTTAAG CGACGTGCTT TCTGTTGA
|
Protein sequence | MPNFADAKIA YATQSNMELG RALLSFSLCQ IKTLVKYANP LLTLSRFLLG DRFTDAALKA TLYGHFVAGE DEVRIQPKVR VLEYAGIGSI LDYAAEEEGQ GVVTPATSVD PASQPIARVY DYTCEAKCDR HLETFKSCIQ AVANLEKDGY AAVKITALTN PDLLERMSKA IVEARNLFAK FDSNGDGMIS RHEFAQTFRV FFKGEDTKLS NMLEELQPDQ NGNVDYIMWS MMLAPGDLPR ICAGCREVGP LALAAPTDEE VELIESMFRR GHALAQEAAQ CGSSVLIDAE QYRYQPAIDN LVLDLQRTFN ATSESKFPIV YNTYQCYLKD SMERLKTDLE RSERFDYHFG AKLVRGAYLE SERELAEKAK VPSPVYTELE ETHQCYNEAV EFLLEYSTQS NKKVELMLAT HNQESIEKAI EVMNRLGVHR QDSTVSFGQL LGMADHLSFN LGRHGYRAYK YVPYGEVKEA MPYLIRRANE NSSLAGGASR EMAMIGQELK RRAFC
|
| |