Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_1155 |
Symbol | |
ID | 7204681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 562197 |
End bp | 563723 |
Gene Length | 1527 bp |
Protein Length | 509 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185909 |
Protein GI | 219121368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.912314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTAACGACG CCGAGGCTGC GTACGAATCG AAAACCAATC CCGAACTCAT CCGGGCCATG CTGTCCTTCG GATTGTGTCA AATTCCTATA CTCGTGCGCT ATTCCGAACG CTTGCTCAAA CTGGGACGCA AGATTGTCGG TGATACCATC ACGGACGGTA TTCTAAAACA AACACTCTTT GGACATTTTT GTGCCGGCGA GGACGAGAAA CAGATTCTCC CCGCCATTCA TAAACTCGAA AAAGCCGGGA TTGGTAGTAT TCTGGATTTT GCCGCGGAAG ACGACGGAGA GGGCGACGAC GGAGACGATG GAGACCGATC CAAGAAGGAA AAAATCGCGG ACGAGATCAT TCAAGATAAA AGTCCCAAAG TGCGCGTCTA CGACTACGAA TCCGAGGCCA AGTGCGATCG TCACGTGGAG ACCTTCCACA AATGCATTCG GGACGTGGCC GATCTCGGTA AAGACGGATA CGCCGCGATC AAAGTTACGG CCCTCACCAA TCCCAAGTTG TTGGAACGCA TGAGCCGCGC CATTGTCGAA GCACAAAATC TCTTTGCTAA ATTTGACGAA AATGGTGACG GCATTGTTAC CAAAGATGAA TTCAAACACG GCTTTAATCT GTTTTTCAAA GGCGAAGACG CCATGCTCAA CGACGCCTTG GATCATCTCC AACTCGCCGA TGGCAGCGTC GACTACATTA CCTGGTCGAT GCTCTTGACC CCGTCCGACC TGCCACGCTT GACGGCTGGT TGTCGCGAGG TCGGTCCGCT GAGCTTGGCG GCACCGACGG ACGAAGAAAT TGAACTCATG GAGCGCATGT TCGAACGTGG ACACGAATTG GCGCGACAAG CCGCCGAGGT TGGGACCCGA CTCTTAATTG ACGCGGAACA AGCCCGGTTC CAACCCGCCA TTGACAATTT TGTACTCAAC CTGCAACGCA CGTACAATGC CACTGGTGTC AGCGAATTTC CCGTCATCTA CAACACCTAC CAGTGCTATC TGAAGGATGT ACCGGATCGT CTCCGGACGG ATGTGGAACG CTCCGAACGT TTCGACTACC ATTTTGGTGC CAAACTAGTA CGGGGTGCGT ACATGGAGAG TGAGCGAGCC TTGGCAAAGT CCCTCGGATT CCCGTCGCCC ATACAGGATA CCATTCAAGA TACGCACGAC TGTTACAACA ACTCGGTAGA CTTTCTGCTC AAACATGCCA TTCAATCGGA CAAGACTTGC GAACTTATGT TGGCCACTCA CAATCAGGAG TCGATCGAAA AGGCCATACA CTCAATGAAT GAACACGGGG TCAACCGCAA GGATCCGACC ATTTGCTTCG GACAGCTCTT TGGTATGTCG GACAATTTGA CTTTCAACTT GGGCCGTCAC GGGTACCGTG CCTACAAGTA TGTGCCGTAT GGAGAAGTCA AAATGGTCAT GCCGTATTTG ATTCGACGCG CCAACGAAAA CTCGTCCATC GCGAGTGGTG CCGCGCAGGA ACTCCGAATG ATTCAAAATG AGCTCAAGAG ACGCGTA
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Protein sequence | FNDAEAAYES KTNPELIRAM LSFGLCQIPI LVRYSERLLK LGRKIVGDTI TDGILKQTLF GHFCAGEDEK QILPAIHKLE KAGIGSILDF AAEDDGEGDD GDDGDRSKKE KIADEIIQDK SPKVRVYDYE SEAKCDRHVE TFHKCIRDVA DLGKDGYAAI KVTALTNPKL LERMSRAIVE AQNLFAKFDE NGDGIVTKDE FKHGFNLFFK GEDAMLNDAL DHLQLADGSV DYITWSMLLT PSDLPRLTAG CREVGPLSLA APTDEEIELM ERMFERGHEL ARQAAEVGTR LLIDAEQARF QPAIDNFVLN LQRTYNATGV SEFPVIYNTY QCYLKDVPDR LRTDVERSER FDYHFGAKLV RGAYMESERA LAKSLGFPSP IQDTIQDTHD CYNNSVDFLL KHAIQSDKTC ELMLATHNQE SIEKAIHSMN EHGVNRKDPT ICFGQLFGMS DNLTFNLGRH GYRAYKYVPY GEVKMVMPYL IRRANENSSI ASGAAQELRM IQNELKRRV
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