| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56477 |
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| Symbol | GDCT_1 |
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| ID | 7201643 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 173615 |
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| End bp | 176516 |
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| Gene Length | 2902 bp |
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| Protein Length | 854 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | glycine decarboxylase t-protein |
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| Protein accession | XP_002180958 |
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| Protein GI | 219120440 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.645348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAACAGTTGG CCGAAGACAC CATGAGAATT CTTCGAAAGA ATCATAGTCA TCGCTGCACA
TCTGGCAAGA AAAGAATAAC TTACCGAAAG CACTGATCAT CCGCGTAAAG AACATACCGC
AAATACTTGT AGCCACGTTT CCCAATCTTT CGACGGCCTA CTGTCACCGA AGTATGGGAA
ACAGGACGTG CTAGCGAAAA TGAAAAGGTT GTCTTGTGTG CGGGGTCTTC GCCTACGGAA
AGGTCGCGTG CATTTAAGAT GTGCATCGTC GCAGACAGTC CCGGAACGAG CAAACGTAGT
GGTGGTGGGA GGTGGGATCA TCGGAACTTC GGTTGCCTAC CACTTAGCCA AGGCCGGCGT
CGAAGATGTT CTCCTCTTGG AAAGAGACCG TCTGACTTCT GGAACAACGT GGCATGCCGC
CGGTTTGATG AATAGTTTCG GATCCATGTC GTCGACATCT ACATGGTCCC GTCAATATAC
GCAAGAACTG TATCGAGATA TTCTGCCTAC GGAGACTGGT TTGGAAACCG GATATATGGG
TATTGGATTC ATTGAGCTGG CATGCGATGC GGATCGACTG GAAGCCTTTC GAAGAATAGC
TGCCTTCAAC CGATTTCTAG GGGTAGACGT AGCAGAAATT TCACCCGAGC AAGTCAAAGA
CCTATTCCCT CTCTGTGAGA CGTCGGACGT CCTCTCAGGC TTTTGGGTTG AGAACGATGG
ACGAGCCAAC CCTACTGATG CGACGATGGC ATTGGCAAAA GGGGCGCGTT TGCATGGTGC
CAATATTATT GAACAGTGTC ACGTAGCCGG TGTGACGACC TCGAAACCAA ATGGTAATTA
TCGTGCCAAG GTAACAGGTG TCCGACTTGA AAATGAAACC GTAATTGCAG CGAATATCGT
CGTTAATTGT GCTGGTATGT GGGCACGGCA GTTTGGGGAG GCCTGTGGAG TGTATAACAT
TCCGAATCAA GCAGCTGAAC ACTACTATTT GATTACTGAG CCTATGAAGG AAATTGATCC
TTCTTGGCCT GTCATAGAAG ACTCTTCGAA ATGCGTTTAC ATCAGACCGG AAGGGAAGGG
GCTAATGCTG GGCTTTTTTG AATGGGAGGG AGCGGCATGG AAGCCCGAAG GGGTCCCTTT
GGATTTTAGC TTTGGTGAGC TTGATCCAGA TTGGGATCGC ATGATGCCAT ACGTGGAGCA
AGCCATGAAG CGGGTCCCGG CCGCTGAAAA TGTTGGTGTC AAAGCGCTTT TTTGTGGGCC
GGAATCATTT ACCCCAGACA ACCGTCCCAT TGTAGGGGAA TCACCGGAGC TTCGCAATTA
TTACATCGCT GCGGGGCTGA ACTCCATTGG AATTTTAACG GGAGGGGGTA TTGGGAAAAT
TTTAGCTCAA TGGATACAGC AGGGATGCTC ACCCCATGAT GTCGACGTTA CTGCCATTGA
TGCAAGTCGA TTCCAACGGT ATCAAAGTAA CATAACATAC CGAAATGACC GTACCGGTGA
GGCGCTGGGA AATACTTACA AGGTTCATTA TCCAGACCAT CAACCAACGA CGTGTCGAAA
CGCGAAGCAA TCTGTTCTGC ACGAGCGATT GGTAAACGCC AATGCATTTT TCCAGGAGAC
CAGCGGTTGG GAATCTCCAT CCTGGTACGC TCCCCATGGA ACCAATCCAA AGGTCGAGAC
TGAGAGTTTT GGCAGAGAAA ACTGGTTCCT ACACTGGGAG GCAGAACATA TCAGCTGCCG
AAATAATGTT GCCCTGTTCG ATATGAGCTT CATGAGCAAG TTTCATGTAC AAGGAAATGA
TGCAGGGAAG TTTCTCAATC GTCTGTCTAC AGCCAACGTA GACGGTGATT GGGGTATGAT
AACATATACA CAGTGGCTCG ATGAACAGGG GTATATGGCG GCGGATTTGA CGATAACTAA
AATGGCAGAG AATCACTTTA TGGTGGTAGC AACAGACACA ATGCTCAACA AAGTCTACAG
TCATATGCTC GATCGACTGG TGCACGGAGA GCACGTTTTT GTAACTGACG TAACAGGTCG
CTACGCGCAA CTTAATTTGC AGGGTCCACG ATCGAGAGAG TTACTGCAAG GCCTGACTTC
TGTCGATCTG AACAACTTTG CTTTCCGTAG AGCAGAAGAG ATTGACATAG GCTTAGCGCG
AGTTCTTTGT ATTCGAATTA CCTATGTCGG AGAGCTGGGA TACGAACTTT TTGTTCCAGT
AGAACAAGCG AGGCACGTTT ACGATTGTAT CGTTGAATTA GGCCGGGAAT TTTCCCTCTC
TCACGCGGGT CTCAAAGCTC TGGGAAGTCT AAGAATGGTA CGTCTTGTGG TTTGTTGGAA
ATATCGATGG TTATCGTTAG TTCCTTACGC TTTCTTCATA CCACCTCAGG AAAAGGGATA
TCGGGATTAC GGACACGATA TGGACAACAC GGATAGACTT CTGGACTGTG GGTTGGGATT
CACCTGCGAT TTTGAGAAAG AAGGTGGCTT CATCGGCCAG AAGCACGTCC TTGCACAAAA
GGATGCTGCG AAAGAGCGAG GAGGTTTATT GAAGCGAATT GTGAATGTTT TAGTCTTAGA
CCCTGCACCT CTATTGCATC ATGGTGAAAT CCTTTGGAAG GACGGAAGGC GTATATCTGA
TATTCGAGCT GCATCTTACG GACACACTGT CGGGGGCGCC GTGGGTTTGA GCATGCTTAC
GCGTGATATT CCCGTAAAGA AAAATTGGTT GGATGGCAGC GACTGGGAGG TTGAAGTTGG
CAGTCGAAAG CATCCTTGTA GGTTGTCGAT ACGCCCGATG TACGATCCCG CTAGCGTTCG
CGTAAAAGAT GCGTAAATGT CATCACTTTT AAATGTAGTG AAGCGGAATA AATCGATGTC
TAATTTTGCT TAGTTGATCC AA
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| Protein sequence | MKRLSCVRGL RLRKGRVHLR CASSQTVPER ANVVVVGGGI IGTSVAYHLA KAGVEDVLLL
ERDRLTSGTT WHAAGLMNSF GSMSSTSTWS RQYTQELYRD ILPTETGLET GYMGIGFIEL
ACDADRLEAF RRIAAFNRFL GVDVAEISPE QVKDLFPLCE TSDVLSGFWV ENDGRANPTD
ATMALAKGAR LHGANIIEQC HVAGVTTSKP NGNYRAKVTG VRLENETVIA ANIVVNCAGM
WARQFGEACG VYNIPNQAAE HYYLITEPMK EIDPSWPVIE DSSKCVYIRP EGKGLMLGFF
EWEGAAWKPE GVPLDFSFGE LDPDWDRMMP YVEQAMKRVP AAENVGVKAL FCGPESFTPD
NRPIVGESPE LRNYYIAAGL NSIGILTGGG IGKILAQWIQ QGCSPHDVDV TAIDASRFQR
YQSNITYRND RTGEALGNTY KVHYPDHQPT TCRNAKQSVL HERLVNANAF FQETSGWESP
SWYAPHGTNP KVETESFGRE NWFLHWEAEH ISCRNNVALF DMSFMSKFHV QGNDAGKFLN
RLSTANVDGD WGMITYTQWL DEQGYMAADL TITKMAENHF MVVATDTMLN KVYSHMLDRL
VHGEHVFVTD VTGRYAQLNL QGPRSRELLQ GLTSVDLNNF AFRRAEEIDI GLARVLCIRI
TYVGELGYEL FVPVEQARHV YDCIVELGRE FSLSHAGLKA LGSLRMEKGY RDYGHDMDNT
DRLLDCGLGF TCDFEKEGGF IGQKHVLAQK DAAKERGGLL KRIVNVLVLD PAPLLHHGEI
LWKDGRRISD IRAASYGHTV GGAVGLSMLT RDIPVKKNWL DGSDWEVEVG SRKHPCRLSI
RPMYDPASVR VKDA
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