Gene PHATRDRAFT_5526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5526 
SymbolhCDK6 
ID7201830 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp539862 
End bp540797 
Gene Length936 bp 
Protein Length258 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180851 
Protein GI219120215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAGTCGTCG CTGGTTACGC GTTGCAACAG AAGCTGGGCT CCGGCTCCTT CGCTACCGTT 
TATAAGGGTG TGCGCTTGTC GCAGACTCCC ACAAATGTCG CTGAAACGGT CGCCATTAAA
GCCATTACGA GGACTTCCGA AAAACTGACC AAAAAGGTGC TGCAAAACTT GGAAATTGAA
ATCTCCATCC TGCGAACCTA CCGGCACCCC AACATTGTGT GCTTACACGA TGTGCAAAAG
ACTGCGCGGC ATTTTTATCT CATTTTGGAG TACTGCGCTG GTGGCGACCT GCAGGGCTTG
ATACGTCGCC GAAAAACGGG GCGTCTTTCC GAGGGACTTA CCCGGCGCTT GATGCGCGAT
TTGTCCGCCG GCCTCAAATT TCTCTGGGGA CAGGAACTCA TCCATAGGGA TATTAAGCCG
CAGAATTTAT TGCTGACCAG CGGCTTACCT TTGGATGAAA GTGACGACTG GGAAAAAACG
GATGAACTAG AAGAACAGCG GCGTCGAGCG AATTTTCCGT CTCAAGAGTT TGGCTTGAAG
ATTGCGGATT TTGGCTTTGC TCGACATCTC CAGACCACGT CGCTGGCAGA GACCCTGTGT
GGGTCGCCCC TTTACATGGC GCCCGAAATC CTGCAACATC ACCGGTACGT TAAGTAGCTT
GGATCGTCTG GTTGTTTCTT GTACATTGGT TTGTTCGTAG ACTGACCGCC GCCTACCGAC
AATCCATTAT CGTTGTTTAG GTACGATGCG AAGGCCGATC TCTGGAGTGT CGGTACGGTT
CTTTTTGAAA TGATTTGCGG ACGTCCACCA TTCAATGGCG AGAATCACAT TGATCTGTTG
CGCAACATTC AGCGTAAAGC GGTCCGTCTT CCACCAGACG TGCGGGTGAG CAAGGAATGT
GTCAACTTGT TGCGACTCCT TCTAAATCGA AACCCG
 
Protein sequence
KVVAGYALQQ KLGSGSFATV YKGVRLSQTP TNVAETVAIK AITRTSEKLT KKVLQNLEIE 
ISILRTYRHP NIVCLHDVQK TARHFYLILE YCAGGDLQGL IRRRKTGRLS EGLTRRLMRD
LSAGLKFLWG QELIHRDIKP QNLLLTSGLP LDEKFGLKIA DFGFARHLQT TSLAETLCGS
PLYMAPEILQ HHRYDAKADL WSVGTVLFEM ICGRPPFNGE NHIDLLRNIQ RKAVRLPPDV
RVSKECVNLL RLLLNRNP