Gene PHATRDRAFT_54591 details

Gene Information

• Locus tag: PHATRDRAFT_54591
• Symbol: Sec7D
• ID: 7201827
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 508362
• End bp: 515262
• Gene Length: 6901 bp
• Protein Length: 2168 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002180845
• Protein GI: 219120203

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGATG CCTGGAGCGG TGGGTTCAAA GGCTTGGGCC TCGCGTCGGG TGACGTGCCG 
GGCAAGAATG GCATAGCAAT CAATCCACAC ACTCTTTTTC TGCATTCCAA GCTCCTACCC 
TTGTTGGAAA AGTTACTCCG GGAGACCCGC ACGCGGAAAA CCAAGGTAAG TCATGTACCG 
TGCGAACGTT GCGTGAAACG ATATTCGTGC AAGAATTACA CGAGCCAGAT TCTAACGCAT 
GCAACTTGTT CGTTTCTTTT TGTCCTCTTT GGGCCACGAC GACAGGATGT CAATACGAAT 
CTTCAGTCGG CTATTTTAGC GCTTCGAACG TTTCTGACGG AAGATTGGCC TCCATCCAAA 
GCTGGTACGA CAACAAACCC CGAGACGGGG GCGGCGCAGG CAACCTCTCG GGCCAATGCC 
GGCCATACGA TAAGTAAGTC TCCAATGGAC GGAGTCCACA CCGAGGCTGA TGTCAAAACA 
GTGACGAACG ACACAACACT ACTCAGCGAG GAAACGGAAG AAGAAGAAAC CCAGTCGGAA 
ACAACTATCG AAACGGAAGT TGCGGAACCC CCGGAGGAAG CCCCTCGTAT TCCAGACGTG 
AAGGCGCACG CCAGCGAGGA TGCCGCGGTG GAAGAGATCA CGGAACATCC CGCCGAAACG 
GACCAAGTTG AGCCCACCTC AGTACCACCA GAACAACCGG GAGCGATACC GGGTTTGGAA 
AAACCACCGG CGCCTACGAG TGACTATGAC GATGACGGCA TCCCCAAAGA CGATCCCCAA 
ACGCGCGAAC CGGTCCACGA GTCCGTCGTC TCCACGCTCG AAGTGCTCAT GCAGATTCTG 
CAGCATCCCT CCAAAACGAA CAAATCGGTG GAGTATATCC TGGATGCTAT CAACCTGTTG 
GTCTCTTACC GGTACGTGTC GGGTCGAGCG GGAGGAAGGG ATGACGTATC CGGATCAGGA 
TCCCAAACAG CCGTTTCTAC GGAAAACGAG ACGGATGATA CGGTGGTGCA AGAACTCAGC 
GCCCCGTCGT CCTCTTTGTT GCATCGTCTC TTAGAGAGTG TCGCCAAGTG TTCGGAAATT 
TTAAACGTCG ATGTCATTCA CATTTGCTTG ATCAAAACGT TAACGTCCAT CATGACGTCT 
CCCAAATGTG GCGTGCATGA AGCATCCATG CTGTTGTGTT TGAAAGCAAC CTTTCACGTC 
TTTCTGGTGA CGAAATCACA AACCGCCAAG GACATGTCCA AAGCTGCGTT GCTCGACATG 
CTGCGCTCCG TCTTTTCGCG CATGGAAGCA TACGACGTTA TTGTGCGGAG CCGTCGGCAT 
CACTTGGTCG GGTCGGAAGC CAGCGAGACG GAAATTGCTA CCGATACGTC AGCGACGTTG 
GCCTCGCAAA TTGATCTTTC CACTGGTAGC AACGGGAGCG ACAACACCGG CACGTACCGT 
CCGCCTCCAT TTACTTCTCA GTATCATACC GATAGCTACG TTTTGTTCCG CGCCTTGTGC 
AAAATGAGTG CCAAGGAATT ACCCGCCGAT ACCACAGATT CGGAATCGAA CACCACTTCC 
AACCGACTTT TTTCCACAAG CAGCAACGCA ACGGACCCTA TGGCTTTGAA TAACAAACTC 
TTGTCACTCG ATTTGATTCT GTCCAGTCTG GATTATTGTG GGGATGCTTT TGGACGCGAA 
CCGCGCTTTT TGCACCTGGT GCAACATTAT TTGTGCGTTA GTCTCTTGCA AAACTGTATG 
TCGCATCAAA CTCAAGTGGC TTTCTTGTCC CAAAAGATAT TCTTGATACT GGTATGTGCT 
ACTATTATTG GTGTGCCATT CTTTGCTAAA GTGATCAAGA TTCTCCGTGA GGCATGTGTT 
TTCTAACACG GCATGTCGCT CTGTTGTTTA AGGTTCACAA GTTTAAGGGC CATTTGAAGC 
AAGAAATTGA AGTCTTTTTG TCAAACATAT TTCTGCGCGT GTTGGATTCT CCGAATTCAA 
GTTTCAAGCA AAAGGCCCTC GTTTTGGAAT CATTGCGATC CTTGTGCCGG GATCCAACGT 
TGTTAACCCA AATCTTTCTG AACTACGACT GTGACTTCAA TGCAATGAAT CTTTACAAGG 
ATATTGTCCA TCAATTGACC AAACTTGGCG GAAAGGCTAC CACAACGCTT TCGAGTTCAT 
TTACGAAGAA AGAAGCGGAA GAAGAGTTCG AGCTTAGTTT GGCTGGTATG GAAGTGCTCG 
TGACTATTCT CAAAGCGTTT TTACGCGCAC TGGCGCTTCC GGGAGGAGAG GATGATACGG 
ATGACACGGC TGGAGCTGCA ATTCGTGGTA TTTTGCAACT AGACGTAGGT TTGGCTGCGA 
CCAGCAAGTC ACCTATCCAC CCGTCGACAG CATCAAGTGC GTCTAGTGTA GTGTCCGAGG 
AATTGCCAAA ATCCGACGGG AACGAAAGCG CAGAGGGAAA TCGAAGCGCT CAAGTGGCGG 
GAAGGATTGT TGATGCCTTC GAAATGAAAC GAAACGCAGA GCAGAACTTT GAGATCGGGG 
CTGTCAAGTT TACGCTCTCA CTGAAAGGTG GCCTAGCTTT CTTCATCGCC AACGGTTTTG 
TTCGACGGAA TGCACGAGAT ATTGCTCTGT TTTTCTTGCG TAACAGGGAC AAGCTGGACA 
AGACCCAAAT GGGTGAGGCG CTTGGGCGTG AACCCGACGC TGCCTTTGTC AAGGAAGAAG 
GTCTGGAATC CGACAACGGC GGTCCGGGAT TTTGGGTAAG GATTCTTCAT CACTATGCTG 
ACGCTTTGGA TTTGTCTGGC TTGCCTTTTG ACGAGGCTAT TCGGTTGTTT CTTTCTGGTT 
TTCGTCTGCC GGGTGAAGCA CAGAAGATCG ACCGCATTAT GGAAAAGTTT GCCGAAAAGT 
TCACTTCCCA AAATCCCGAC CTCTTTCCGT CGGCCGATAC TGCATTCATT TTGGCTTTTT 
CAGTCATCAT GCTGAACACT GATTTACACA ATCCCAGCAT CAAACCCGAA CGGCGGATGA 
CGGTTGATTC ATTCGTTCGG AATAATAGTG GTATTGGCCA AGATGGTGGT GACTTACCGA 
AGGAATTCTT GGAAGAAATT TTTGACAGAA TCAAAGAACA GCCATTCAGT CTGAAAGAAG 
ACGATGCCGC GCGGGAAAAA GCAGGCGCTC ACAAGCAAAT CTTCGATACA TCTGTGTTTT 
TTGAACGCTC AACATTCTCG AGATCCACAG CTGATGACAA AAAGCGTGAA ATGTTCAAAA 
AGGAAAAAAA CGAAATGATG GCTGTGACTC AGCGTCTAAT TCGGCGTCGC CCTGACCAGA 
ACAACCGCTC ACAGGCGACT TCACTGACGG ATACTATTTC TCCTTCGGAC GTGGTAAAAC 
CAATGTTCGA CGTGACATGG GGACCGATGA TAGGGATTTT GTCGCAAGTC TTGGAATGTT 
CCGACGATGA GCGTGCCGTG GCCGTTTGCT TGAACGGTTT CGTGTACGCT GTCCGCATCG 
CTGCGCACAG TAAGATGTCT CTCGCCCGGG ATACATTCGT CTCGTCGCTT GCGAAATTTA 
CCTTTCTCGG TTCATTGAAA GAGATGAAGC GGAAGAATGT GGAGAGCATT CGGACTTTAT 
TGAGCATTGC TGTCATTGAC GGCGACTTCC TTAATGAAAG TTGGGGGCCG GTGCTACAGT 
GTATATCGCA ATTAGCTCGC CTGAGACTCA CAGCGTCAGG CCTCGACTCA GACGAGTCCT 
TTTTGGTCGA AAAAGAGAAA GCAAAGAAAG CTGCGACTCC TAATCGTGGT CGTGAAGCAG 
AAGAGAGTAA TGGCCGCGCC GTACTGGAAG CGGTCCAGGA GGTTTTAATT TTTAAGGTTT 
TCTCTTCCTC CGTGAGCCTT TCAGCGAAAA GCCTCGGTCA CTTTATATCC GAACTCATCG 
CTGTGTCTGA ATCTGAAATT GCTGGTAACT CAAAGCAAGG CATCACGGGC ATGGAGCCAA 
CCGGAAACGG AACTGAGGCC ACAAAGAAAA TCGGCGATGG ACCTGCGATT TTCTCGTTGC 
AGCGTCTAGT CGAGGTAGCG GATTATAACA TGAACGTACG TCCCCGTCTC GTTTGGGCTC 
AAATATGGGT GATGATGGCC GATTATTTTG CAAAGATAGC ATGCCATGAA AACGCTTTTG 
TCAGTGTGTT TGCAATTGAC TCGTTGAAAC AGTTGAGTTT CAAATTCTTG GAGAAACCCG 
AACTTTCGGA GTTCAATTTT CAGCGTTTGT TTTTAAAGCC ATTTTTGGTT GTAATGGAAG 
ATCCTTGCAG CAGAGAAGAC GGACGCGAAC TTGTTCTGCG ATGTATCGAC AATATGATTC 
GGACGAAAGC CTACAATCTT CGCAGCGGTT GGAAGGTTGT ATTTTCTATA TTGACCAGGT 
CAGCAACAGA TCCAAGTGAA AAGATTGATT ACCTGGGGCT TGCAACTCTT CAGCGCTTAC 
TTGACGACCA CCTGAATGAT TTATTCATCC CTCTGGAAGA CACTACATTG GTAAATGATC 
TCGAAGCCCT ATCAGCTCTG GAACGTCGAA ATCGAAATTC AAACGTTGAC GACTTTGTCG 
GGCTCTGCAA GGCATCGCTA TCTTTCGTAC AGAGGGAGGA TACAGACTCG CCTAGACCTG 
CGGGATTATC CATGAGAGCA TTTTGCCATA CTGCTATTTA TTCTGATTTA CTAGCAGCGA 
AACGAATTCT TCCTCCAGTA TCTGGTGAAC AGGTACGCAC CACAGCTGAA GGAATTACTT 
TCGGGATTGT AGTATACTCT AACACATTTC CAAATTTCAG TTTGAAGACC GAGAAGAGGC 
CGGCTATACG TACCCGGAAC TAGATAGGAC TGAAGCCCTT GAAATGGTTC TTTGGCGACC 
ACTGCTTGAA GGCTTAGCTG ATGGCATTCG TTCCACTTTA AGAAGTAGCG CGGGTGGTGT 
TGGCTGCATT ATTCAACGAG GAAGTGTTTT AGCCTTACGA GCTATCTTAC TCCGACACGG 
ACATATCTTC TCGACTAATC AAATTGCCGC CATTCTCAAA TATACAGTAA TTCCTGCTAT 
TCAGGCCGGC GCGGAAGCAG ATAAAGGTTC TGTTGTCAGT GTCACGTCGG AATCACCTTC 
TATTTCCAAC ATTGATTTTT TGGTCGATCC ATATCCTATT CCACCCCCTC CTGACGATGT 
TTCACTACTT CGTTTTGAGG CAATGAATAC AACCCCTCAC AGTCGATCTT TGGGCCCAGC 
CGAATTAATG CTTGAGGCTA GTTTCTCCGA CTTGAGACAC TGTGGTGACG GAGACCTACG 
TCGTGCCTTT ATCTTGGCAA AGAAAGCTGC TGCTGTCGCT CCGAAGGTCA TCGAGCAAGC 
TTTCCCAGAC AGTTGGATTG CAACTACTGC GCCGGTGGCT CTGGGACTCT TAACTGATAT 
TGTGAGTGAA CTTTGTCTCG AAAGAGGGCT TGACGGGCGT GAAAAAGTTT GGTCTTTAAT 
ATGTAATCAG TACACACTTT GGTATCTTGG CCGTGACAAT CCAACATGGA CTCCATGCGA 
AGCGTTGGTG CGAATCGCAT GTCAAGAAAT GCGTCGCTTT CCTAAGCGCT TGGCGGAGTT 
TTCACCGAAA CTTGAAAGCA GTGAAGCCAC CGCATGGTCA ATTTCTGTCT GTTTGCTTTT 
TTCTAAGCTA CTTTCGGAAA GCTCGCGAAT TCAAATGGAC ACATGTAAGA GTTTGGTGCA 
TCGCAAGGAG AAAGCGCTTG TTGTGCAGAA GTCAAAAGAC ACGGACACGG ACAGTTTGGA 
TGATGTTGAC GATATTCCAA TCACAACTCC GTATGGAAAA GGGCTCATAG TTAAGAACAG 
AAACGATCGC TATCGTGCAG AGATTGAAGG CGGGGCAGAT ATTTTCTTGG AGATGAATGT 
TATCTCTTTG GATTTTGGCG CATCCCTCTT CAGTCCAGTT GAAGGGTCGG TCCGAAAAGT 
GATTCCCCTA GAGGACGACA GAGACATATC ATCGGTGCCA AGCACAGGTC AAGATCGACT 
TCGTCTCAGC GGCGGCATCC CCCGTGAAGT GAATGGTAGG TTTACTTTAT CTTGCACACC 
TTACTATTTT GATAAATCTC ATGACCGATG TTCTCAACTT TTTAGTGCCG AATGCTTACT 
GGCAAGAGCT TGTCCCCATA TTAAAGATTC GATGCGTCGC AGCTCACTGT CTTCAGGAAT 
CATTGGCAGT ACTCATCGAA GATTTTGTTC TCTTCTTACC CGAAAATGTA GTGGTAGAGC 
TTCTCAAGAC GCTGAACGGG TGTAGGGCGG CAGCACAGGA AGCAGCACGA GACGAGGATG 
TTGCCACAGC GTTCCAGGAA GCGTTGTTCC ATGATTGGGG AGACGGTGTT GCCGAAGTGG 
AGCAAGCCTT GGAGAGTGCA GCTAGGCTTT CTCACTTGCA TGGCAGCGCG ATGTTCTTTT 
TGGCCCAAGA AGCCAGCGCA ACTCAGGCAT TGGTGAGTCT TCTGTCCCCT CTATATTTGC 
ATAAGCAAGG TAGAGGAACC CTGCAAGTAG AGGAATGGGG TCGCAAGATG TTCGCGGAAC 
CGCATGTCAT GGCAGCAATT AAAGAAGTCA CAAACAAATT CCTCGAGTCG GAAGAGAAAG 
ATGGTCATTT AATCGACCCG AATGTCTGGC GTAATCTCCA AGAAAGCGGC GGCAAAGTCG 
CCTTATATTG CACTTTCTTT GGAACAGTTG TGGTCAATCT TTTGAAACTC ATTCGCTCTG 
TTGAAGAAGA TCAATTTTCC TTGCATCTCC AGGAATTCTT TCCGATACTG TGCAGTCTTG 
TTCTTGTTCA GAGTGACGAG ATCCGCAAAG CTGTACAAGA AATACTGCAA CTCCAGGTCG 
CTCCAATGTT ACAAGTGAAA GTATAGTATA AAAATGCAAG TACTACTACA TCGACATGTC 
T 

 

Protein sequence

MLDAWSGGFK GLGLASGDVP GKNGIAINPH TLFLHSKLLP LLEKLLRETR TRKTKDVNTN 
LQSAILALRT FLTEDWPPSK AGTTTNPETG AAQATSRANA GHTISKSPMD GVHTEADVKT 
VTNDTTLLSE ETEEEETQSE TTIETEVAEP PEEAPRIPDV KAHASEDAAV EEITEHPAET 
DQVEPTSVPP EQPGAIPGLE KPPAPTSDYD DDGIPKDDPQ TREPVHESVV STLEVLMQIL 
QHPSKTNKSV EYILDAINLL VSYRYVSGRA GGRDDVSGSG SQTAVSTENE TDDTVVQELS 
APSSSLLHRL LESVAKCSEI LNVDVIHICL IKTLTSIMTS PKCGVHEASM LLCLKATFHV 
FLVTKSQTAK DMSKAALLDM LRSVFSRMEA YDVIVRSRRH HLVGSEASET EIATDTSATL 
ASQIDLSTGS NGSDNTGTYR PPPFTSQYHT DSYVLFRALC KMSAKELPAD TTDSESNTTS 
NRLFSTSSNA TDPMALNNKL LSLDLILSSL DYCGDAFGRE PRFLHLVQHY LCVSLLQNCM 
SHQTQVAFLS QKIFLILVHK FKGHLKQEIE VFLSNIFLRV LDSPNSSFKQ KALVLESLRS 
LCRDPTLLTQ IFLNYDCDFN AMNLYKDIVH QLTKLGGKAT TTLSSSFTKK EAEEEFELSL 
AGMEVLVTIL KAFLRALALP GGEDDTDDTA GAAIRGILQL DVGLAATSKS PIHPSTASSA 
SSVVSEELPK SDGNESAEGN RSAQVAGRIV DAFEMKRNAE QNFEIGAVKF TLSLKGGLAF 
FIANGFVRRN ARDIALFFLR NRDKLDKTQM GEALGREPDA AFVKEEGLES DNGGPGFWVR 
ILHHYADALD LSGLPFDEAI RLFLSGFRLP GEAQKIDRIM EKFAEKFTSQ NPDLFPSADT 
AFILAFSVIM LNTDLHNPSI KPERRMTVDS FVRNNSGIGQ DGGDLPKEFL EEIFDRIKEQ 
PFSLKEDDAA REKAGAHKQI FDTSVFFERS TFSRSTADDK KREMFKKEKN EMMAVTQRLI 
RRRPDQNNRS QATSLTDTIS PSDVVKPMFD VTWGPMIGIL SQVLECSDDE RAVAVCLNGF 
VYAVRIAAHS KMSLARDTFV SSLAKFTFLG SLKEMKRKNV ESIRTLLSIA VIDGDFLNES 
WGPVLQCISQ LARLRLTASG LDSDESFLVE KEKAKKAATP NRGREAEESN GRAVLEAVQE 
VLIFKVFSSS VSLSAKSLGH FISELIAVSE SEIAGNSKQG ITGMEPTGNG TEATKKIGDG 
PAIFSLQRLV EVADYNMNVR PRLVWAQIWV MMADYFAKIA CHENAFVSVF AIDSLKQLSF 
KFLEKPELSE FNFQRLFLKP FLVVMEDPCS REDGRELVLR CIDNMIRTKA YNLRSGWKVV 
FSILTRSATD PSEKIDYLGL ATLQRLLDDH LNDLFIPLED TTLVNDLEAL SALERRNRNS 
NVDDFVGLCK ASLSFVQRED TDSPRPAGLS MRAFCHTAIY SDLLAAKRIL PPVSGEQFED 
REEAGYTYPE LDRTEALEMV LWRPLLEGLA DGIRSTLRSS AGGVGCIIQR GSVLALRAIL 
LRHGHIFSTN QIAAILKYTV IPAIQAGAEA DKGSVVSVTS ESPSISNIDF LVDPYPIPPP 
PDDVSLLRFE AMNTTPHSRS LGPAELMLEA SFSDLRHCGD GDLRRAFILA KKAAAVAPKV 
IEQAFPDSWI ATTAPVALGL LTDIVSELCL ERGLDGREKV WSLICNQYTL WYLGRDNPTW 
TPCEALVRIA CQEMRRFPKR LAEFSPKLES SEATAWSISV CLLFSKLLSE SSRIQMDTCK 
SLVHRKEKAL VVQKSKDTDT DSLDDVDDIP ITTPYGKGLI VKNRNDRYRA EIEGGADIFL 
EMNVISLDFG ASLFSPVEGS VRKVIPLEDD RDISSVPSTG QDRLRLSGGI PREVNVPNAY 
WQELVPILKI RCVAAHCLQE SLAVLIEDFV LFLPENVVVE LLKTLNGCRA AAQEAARDED 
VATAFQEALF HDWGDGVAEV EQALESAARL SHLHGSAMFF LAQEASATQA LVSLLSPLYL 
HKQGRGTLQV EEWGRKMFAE PHVMAAIKEV TNKFLESEEK DGHLIDPNVW RNLQESGGKV 
ALYCTFFGTV VVNLLKLIRS VEEDQFSLHL QEFFPILCSL VLVQSDEIRK AVQEILQLQV 
APMLQVKV