| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54588 |
|---|
| Symbol | GWT1 |
|---|
| ID | 7201572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 471835 |
|---|
| End bp | 473315 |
|---|
| Gene Length | 1481 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181014 |
|---|
| Protein GI | 219120556 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCGTCGACGC TTCCTCTCTA GTAGGGAATA CAATACCATG AATTTACCGA ACTGCATCGA
TAGTAGCACT TTGTTCGTAC TTTGCTGGAC AGGAAGTGAC TACTAGCGGG ATAGTATGTT
TGCGAAAAAG CTCGCCAAAG AAGCCTTCGT CATGGGGTTA GAAGGGACAA CGCCTCTCGA
GCTGCTGCTA GTTTTGTCTT GCATTCCTAT TGGATTTTGG AGTTTCCAAT TTCTCCCCAG
TGCGAATCCA TGGCAGTCGT CTGTCTCCGA AGCAATAACA TTTTGGATTC CCATGATTCT
GTGCCAAAGC AAGTTGCTTT ATCCGTATGG TGTACTTTAC CTTGCCTCAG AACTTACCTT
TGCCATCATA AACGAGTCCG TCAGACCAAA TAGAGAAGTA CTAAAGAGGA CTGACGATAT
GCGGCGAGTC ACCTTGACTG TGTATCGATC TTCGCTCCTT TATCTGACGT TTGTAGCTAT
TTTATCCGTG GACTTTCACT TTTTTCCCCG GCGATTTGCC AAGACAGAAG AACGTGGCTA
CAGCCTTATG GATATGGGTG CTGCGTCGTT TGTGATTGCT GCTGGTCTAG TATCGACTCG
TGCCCGGGGT AAGACAGCGA ATACCCGGAG AGATTTTGCA CGGACCTTGC CGCTGCTCAC
ATTGGGAGTC TTGCGATTGA TTGCTCACAA GGAGTTGGAG TATCAGGAGC ATGTCTCCGA
GTATGGTGTC CATTGGAACT TCTCCTTTAC GTTAGCCATC TTGTCACCGG TCGGGGCACT
GCTACCAGGT CCCACTTGGA CTCTTCCAGT GGCTCTTTTG AGTTTCTACC AATTTGCTTT
GTATTCTTTC GGGCTTCAGA CATGGATCGA GGATTCGCCT CGACAATGTC TTGAATTCGA
CCACAATATA TGTCACTTTT TCGCAGCCAA TCGGGAAGGA TTGCTTGGAT GTGTTGGATA
CAGCGCAATA TATCTATTAA GCGAATGGTT TGGCTCTCAA TATCTCTGGA GAGCGCCCGA
CGACAATTAC AGATTGAAGT TTGGATTGTT CAAATTCACG GGAGGGTTGA CCCTATTCTG
GTTGATATTG GAAGCGTCCG GCTTGACAGC ATCCCGCCGC TCAACCAATC TTGTGTTTGC
CGTCTGGGTC CTCCTAGTAA ACATTTTGAT TCTTACTACC GTGCGATACG TTTGCGTTGG
GCATGACAAG GTACCTTTCG TACTAAACAC CGTAAACAAA CATGGGTTAC CTTGCTTTGT
CGGGGCGAAT TTAATGACGG GAATTGTAAA TTTGTCATTC GATACAATGC AACAAAATGA
CACCACCGCG TTCGTAATAC TGCTAGTCTA CATCTCTGGG GTCGGGACAC TGGCGGTGTC
GCTCAACATT CTCATCCCCA AACTTAAAGG CTTCTTCTCA AGGCTACCTC CTGGAAAGGA
AAAAATAATG TGATATGTTG ATTAAATGTA TGTTTCGTAT A
|
|---|
| Protein sequence | MFAKKLAKEA FVMGLEGTTP LELLLVLSCI PIGFWSFQFL PSANPWQSSV SEAITFWIPM
ILCQSKLLYP YGVLYLASEL TFAIINESVR PNREVLKRTD DMRRVTLTVY RSSLLYLTFV
AILSVDFHFF PRRFAKTEER GYSLMDMGAA SFVIAAGLVS TRARGKTANT RRDFARTLPL
LTLGVLRLIA HKELEYQEHV SEYGVHWNFS FTLAILSPVG ALLPGPTWTL PVALLSFYQF
ALYSFGLQTW IEDSPRQCLE FDHNICHFFA ANREGLLGCV GYSAIYLLSE WFGSQYLWRA
PDDNYRLKFG LFKFTGGLTL FWLILEASGL TASRRSTNLV FAVWVLLVNI LILTTVRYVC
VGHDKVPFVL NTVNKHGLPC FVGANLMTGI VNLSFDTMQQ NDTTAFVILL VYISGVGTLA
VSLNILIPKL KGFFSRLPPG KEKIM
|
|---|
| |