| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54586 |
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| Symbol | |
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| ID | 7201565 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 437144 |
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| End bp | 441830 |
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| Gene Length | 4687 bp |
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| Protein Length | 1525 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | XP_002181010 |
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| Protein GI | 219120548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTC GACCAACCTT GGGATCCTTT CGGAAACGAC TGTCCGGTCG ACGGACCAAG
GACAAAGAGG ATGAGGGAGG CAGCGTCCCA CGACGTCCGA GCACCCCGCC GAGATCCCCG
AATTCAAGGC GGTCCTTCAG TCAAGATCGT CCCAAAAGTC GCAGCCCGGT GAACAGTCCC
AATCGACCTC ACAACTCGCG TAGGTCACAC AGTCTGAACC CTTCCGTTGA AGATGCAGCG
ACCAACGGTG GTAGCGAGGA ATCGGTAGTC TCGGGGAGTC CTTCGTCCAC TTCGTCATCC
CGCGGGGGAC GTAGTCGGGA CTCTCGACCG AACATACTGC AACGCATGCG CGAACGTTCC
CGGTCTCGGT CTCGTTCCCG CAAACGTGAC GTTAACACTA GTAGTCCGAA AGAAATGCTC
GTGGCCGTCA CGTCCTGTCG CTCGGACGGC TACTACAATC AAAAGGCTCC GGGCTCGACG
TCGAAACTAC CGCGAAAGGC ACCCACCAAT CTCAAACTCT TCCACGAACT GGCGGTCGGC
GTCAAGGATG CCTACGCGGC CGTCGGAGCG ACCCCGAGAA AACTAACCGA GGAAGAAGAA
GCAAGATTCA AAGATGAAGA AAAGATTGGA CGAACGGTTT TGTGGGATTT CGTTGGCAAT
CTCGATTTTG TAAGTGCGAA CCAAAAATGC CCACCGATAC CCGCTCTTGC ACAGGCTAAA
ACGGCGTGCT CACGCAATTT GTTTTTTTAT TGTATAGCTG TTGGCTCTCG TGGACGAAGT
TGCTGTGGAT ACCATCACTC GTGGAGCACT TAAAGATGAT TCTACTTTTA AAGGACTCCG
CGACGTTATC AAAAAGGGCA ACCGTGTATT GGAAGAGATG CTAGTCCGCC GAGAACGCAA
ATACACTCTC TTTTTCCGGC TTGTACAACC CCATGATCGG GACCAAATTG ACCGTATGCG
CTCTTGGAAC CAGAAAGTTG AAAAGGCCGT TGGTGCCGTC ACGGGCGGAC GCGAATCCTT
GGGTGAATCA GAGAACGACA GCGATACGAA CAGTATTTCG TCCAATTCGT CGGCATCCGT
GAGTAGCCGC GCCGGGGTCT TCTCACGCGG ACGACAGCTG TTGCCAACTG CTGGACGTGT
GCGATCACGA CGAGCGACAC CCACCCCACG GCTACGTAAA CACCGAAGTC AGGGGGACAT
CACGGAAGAT GATGCCGGAG CGGCCGAAGA CGGGTTTTCC ACCGTCAGTA TGGCACCCGA
CTCGGCACAG TCGCCGAAAA GCTCCTCATC GGGAGGCGAT GGTGGTGGAG GTATGCTGCC
ACCAGCAATG CGTTCCGGAG GGCAAGGAAA CTCTCACCAT CCAATGGCTT CTGTCGAACA
AGTGCGACCA AAAGATGAAC TGGTGGACGT TATTCGCGGT TTGCGAGTTG ACAAGATTCG
TAATCAAGAA GGATCTTCCG ACAAGGATCT AGCGGAACTC AAGCCGAACT GGCGACCCAA
AGCGGAGATT CCTCCATCCG TACCCAAGCT TCCAACCGAG TACGTTCACC GACACCGATT
GATGAAGCAG GTTGTTAGTT GTCTATTGGA CGAGAACGAG CCCCCCAAAA ACGAAGACGG
CTCTCTCCAG AATACGATAA TTACGTGCGT TACATCTCGG CACGGCGACA AAGCCGGGAA
TGGAAAATCA ACTTTAGCAA TTGCTGTCAT TCAGACTGTT GAAGTCCGCG AACGGTTTCC
GAATGGTATT GCTTGGCTCA AGCTGGGGCG AGGCCCTCTA AGCGAGCGAG ACATTCGGCG
CTTATACGAA GATTTATATC GACAGCTTGT TGTAAAACAA GCAGATATTG AGGGTTCCGT
CTCGGAAGCC GATACTGTAA ACTTCCACGA GTCATTTGCT TCCACTGGGT CTGCTAGAAC
AGAACCGTCA GAAACAAGGA TTGATCGCAC AGTAGACCGG GCCGACAGCG TTCGTCGCTT
TGAAGGAGGG GATTTAGAAG GAATCAAGGA AGATCTAGGA CGAATGCTTG TGCGCCAGAA
AGTTTTAGTC TGCCTTGACG ATGTATGGAG AGTGGAGGAC GCCAAGTGGT TTATTTTCGA
GACACCGTCG TATTCTGCAC CGCCACGAAA CAGCCCATAC AAGATCTTGA TAACGACTCG
AACACCATCT TTGCTTGGGG CTGGAGCTGT TCAAGAAGTT TTCGTTCGAA TTTTGTCTGA
ACATGAGGCA GTCAAGCTGC TCCTATCGAC TGCAGGGCGG CGTCCATATG GTGGGCGAAA
TTCTACAGTA TTCAATCAAT CAAAACTTAT TGTCAAAGGA TGCGGCAACT CACCACTAGG
GATTATTCTT GTGGGTAGCA TGCTGCGCGA ATACAACCGA AATTGGAATT TGACCTCACC
TGTATGGACG GGCATCTTTA ACCAGTGCAG TTTGAATCTT GAAGAAGCAG CCCAGCTCCG
AAGTTTCAGG AACGCATTTA ACCGAGTTGT CGATACTGCC CTTTTTACAA TCGAAGACTC
ATTCTTCCGA ATCGCGTTGC GACGATGTTT TGTATACTTC GCCATGGGTT TCCGGGCCAA
TGACTGGATG TTGTCAGGTA TTGGGATCCC GCAATCCATT ATCCTTAAGT TTTTTAGGGT
TGTTATTGCA GCTGGTCCAC GAAACAATGA CTCTGTTGAG CCAGAAGTTG TTCTGGCAAA
GCTGGAGAAT TTAAAATTGA TTCAGCGCGC GAGGCATTCC GTCACGCTGC AAATCACTAA
ACCTGGTACA GATAGTCCCT CGGTGTCGTC ACACGGAAAA GAAAACGGTG AGGCATCAGA
GAAGTCAGAA TCTGACTGGG ATGATTTCGA TGAGATCGTG AAGCCGCCTG TCCAGCACTG
TTATACCATG CACGATTCGC TAAAAGCTGT CGCAGAACTA ATGGCACAGC GCGCATTGCC
GTCGTTTACC CCTGCAGAAG ATCAGTTCAC TTACTTTTCC GATCTCATTC GGCACGAGAC
TGATATCGGA TCCGGAGAAA ATCGGGCTTG GTCGGCGCCA TTGCGCTTTC TATTTCAACA
CCTGTCACCA CAAACTTCAA CCTCGAAGAG TAGTTCTCTC ACAAATGAAC ATGTCCACGA
GCTCGTAGTC ATTGCGCTTC TTGGTGGGGG CGATGGGAAA GCGCTATCAA AGTCATCTGT
TTCAAGTGTC ATGAAAGCGA ACCAAATTTC TATGCAGTTG ATGGAAGGGG GTACCAAATT
CGAAGAGTAT ACGATGTCGT TTATCATTGA GCATCTCATG TTGTCAAGGT CGCTTTCCAG
CACATCCGAG CTCATAACCG ATTCAGAGTT CGTTCGGCGT CGTGTATTTG CCCTTGGCAT
TATGGAAGCG ACAGGACGTC AAGTGGCCGA CATTTTGGAT CTCCGTGGGT TTGCGGGCAA
AGGAGGAGCG AAAAGAACAG CTAATACGCT GCCGTCACCT ACAAAAGATG TGCAGTCTCC
AAACATTGAT CGAACCGTGT CCGAAGACAA AAGTGAATCA AACTTGAACT TCGACGTCGA
AGAGGTGCTG TGCGCTGCCT CGCGCATCAT CATCGACGAA GTCTACAAAG CAACGAATAC
AATGGGTTCG TCAGACTCCC TGGGCATGGC GACGTGTTTA GCAACAGTCG GAGAAACGCT
CCTGAAATGC CGCCAGCCGC GTGATGCAAT GCTGCGGTTG GAAGAAGCTG TCAGTATATA
TCGTGGGCTT CTCGGGCCGT ACCATGTTTA CACTGCACAT GCACTGCACT CTACTGCAAA
GGCTTTGGGC AAACTAGGAG AAACCCGTGT TGCACTGCTC AAATTTGCCG AGGCCGCCCG
CATCTACGAA GCCTGCAACG CCACCCTTCA CTATGATTCA ATCACGAACG CCCAGTCCTT
AGCCGCACTG CTTGTAGACA TCGGTGACAT ACGGAAAGCC GAATCAATGT TTGAAGAAGT
TATTTCAATG AAGCGAGCTG TTTACGGCGA ATTTTCGGTG CCTGTTGCAA AGACCATTAA
CAGCTATGCA ATTCTATTGG CCAAGCATGC GCGTATGAAA GATGCTCTTC GCAATTACGA
GCTCGCCAAA TCCACTTATC AAAAAGCTCC TCCTGCTCTC ATTGTAGATC CTGAATTCGA
CGTCAAATGC AAATACGATG TGACCCTCAT CAATCTCAAT ATTGCATCAA TCTACTCGAA
GAAAGGCGAC CTTCAGCGAG CATTGACCTG CTACGAAGAC GGTGTTACTG GTCTAGAGCA
ATACGAAGCT TCAATGGACG AGATCAGAGA AAGCGACTGT GTGATTGACG TTACTGCGAA
GCATTCTTCA CACAAACATC TAGTCGCAGC TCTGGGTCGC ATTGGCTCGC TTAAGCTAAA
ACTTGGTGAC AATGAAGGTG CGCTGGAAGC CTACCTATCT CTAATCGAAC AAGTCGACGA
AGACAGTCCT ATTGCTTCGT ACACGGAACA AGCGAAAGCG CACATTAAAT GCGCGACTAT
CTTTCGACAG CGCAACGGTG AAAAGAATCG GGATGAGTCG ATATCGCATT TAAAGGAGGC
CCTTCGAATG TACAAAGCTC TTTACGGAAA CGAGCACAAA GATACAACTG CAATTTCCAC
ATCATTGAAG CAATGGTTAG CAGAGGATAA GCAACCTCCC AATTAATTTC TTAGGCTTGA
TTGTGCC
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| Protein sequence | MKGRPTLGSF RKRLSGRRTK DKEDEGGSVP RRPSTPPRSP NSRRSFSQDR PKSRSPVNSP
NRPHNSRRSH SLNPSVEDAA TNGGSEESVV SGSPSSTSSS RGGRSRDSRP NILQRMRERS
RSRSRSRKRD VNTSSPKEML VAVTSCRSDG YYNQKAPGST SKLPRKAPTN LKLFHELAVG
VKDAYAAVGA TPRKLTEEEE ARFKDEEKIG RTVLWDFVGN LDFLLALVDE VAVDTITRGA
LKDDSTFKGL RDVIKKGNRV LEEMLVRRER KYTLFFRLVQ PHDRDQIDRM RSWNQKVEKA
VGAVTGGRES LGESENDSDT NSISSNSSAS VSSRAGVFSR GRQLLPTAGR VRSRRATPTP
RLRKHRSQGD ITEDDAGAAE DGFSTVSMAP DSAQSPKSSS SGGDGGGGML PPAMRSGGQG
NSHHPMASVE QVRPKDELVD VIRGLRVDKI RNQEGSSDKD LAELKPNWRP KAEIPPSVPK
LPTEYVHRHR LMKQVVSCLL DENEPPKNED GSLQNTIITC VTSRHGDKAG NGKSTLAIAV
IQTVEVRERF PNGIAWLKLG RGPLSERDIR RLYEDLYRQL VVKQADIEGS VSEADTVNFH
ESFASTGSAR TEPSETRIDR TVDRADSVRR FEGGDLEGIK EDLGRMLVRQ KVLVCLDDVW
RVEDAKWFIF ETPSYSAPPR NSPYKILITT RTPSLLGAGA VQEVFVRILS EHEAVKLLLS
TAGRRPYGGR NSTVFNQSKL IVKGCGNSPL GIILVGSMLR EYNRNWNLTS PVWTGIFNQC
SLNLEEAAQL RSFRNAFNRV VDTALFTIED SFFRIALRRC FVYFAMGFRA NDWMLSGIGI
PQSIILKFFR VVIAAGPRNN DSVEPEVVLA KLENLKLIQR ARHSVTLQIT KPGTDSPSVS
SHGKENGEAS EKSESDWDDF DEIVKPPVQH CYTMHDSLKA VAELMAQRAL PSFTPAEDQF
TYFSDLIRHE TDIGSGENRA WSAPLRFLFQ HLSPQTSTSK SSSLTNEHVH ELVVIALLGG
GDGKALSKSS VSSVMKANQI SMQLMEGGTK FEEYTMSFII EHLMLSRSLS STSELITDSE
FVRRRVFALG IMEATGRQVA DILDLRGFAG KGGAKRTANT LPSPTKDVQS PNIDRTVSED
KSESNLNFDV EEVLCAASRI IIDEVYKATN TMGSSDSLGM ATCLATVGET LLKCRQPRDA
MLRLEEAVSI YRGLLGPYHV YTAHALHSTA KALGKLGETR VALLKFAEAA RIYEACNATL
HYDSITNAQS LAALLVDIGD IRKAESMFEE VISMKRAVYG EFSVPVAKTI NSYAILLAKH
ARMKDALRNY ELAKSTYQKA PPALIVDPEF DVKCKYDVTL INLNIASIYS KKGDLQRALT
CYEDGVTGLE QYEASMDEIR ESDCVIDVTA KHSSHKHLVA ALGRIGSLKL KLGDNEGALE
AYLSLIEQVD EDSPIASYTE QAKAHIKCAT IFRQRNGEKN RDESISHLKE ALRMYKALYG
NEHKDTTAIS TSLKQWLAED KQPPN
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