Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46626 |
Symbol | |
ID | 7201750 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 941188 |
End bp | 942161 |
Gene Length | 974 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180928 |
Protein GI | 219120377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCAGA TAGCACTGTC CATGCAGCCG CACGTCGGCG AGATAGAGCT GGACTCGGCG GCTTTGATCA TAATTGACAT GCAGGTAAGC AGCACGAGGG CCCGACGTAA TAACGCTATG TACACGGTCG GTCTATAAAG CGTGAATGGA TAAACTCTAG CTTATCCAAC GTATTCTTTC TAACCTTTTT CATGGAACAG CGCGACTTTT TGGAACCCCA GGGATTTGGT GAGCTCCTTG GGAATGACGT TTCCAAGTTG CAAAGAGCGA TTGATCCGTG CCAAAAAGTT CTCCAAGCCG CACGAAAAGC AAATCTTACA GTTCTTCACA CTCGAGAAGG ACACCGAGCA GACATGCTAG ATGTCCACGG TCACAAACTA CAGCGGTTGG GCTGTGCCTC CCAAGTGATT GGTACTCAAG GACCCAACGG ACGAATCCTC ATCCGAGGAG AAATGGGACA CGACATTATT CCTGCTCTCT ATCCAGTGGA CGGCGAAGCG GTGATTGACA AACCGGGAAA AGGTTCCTTT TACGGTACAG ATTTGGAAGT TATTCTGGCG GCGCGCAACA TCCGAACTCT CTTTGTGTGT GGTGTTACCA CCGAGGTATG CGTGCACACA ACCGTTCGCG AGGCCAATGA TCGCGGTATA CACTGCGTTG TGGTTTCTGA TGCGTGCGCT TCCTTCTTTG ACGACTTTCA TCGTGTCGCC TTGGAAATGG TTGTCGCACA GGGAGGAATA TTCGGCAGCA CGGTGGAGTC CAAGGAACTA GTTGGAGCAT TCGAAAGACT CACAAAGTAA CGGAAAAGGC AACGAATGCA AGCATCGCCG CAAGAATGTT TGCTGCTTCG GTATTTCGCA CATATTGTGT GTTTATACGT GTGAAGTGCT GCAGCTCGGA TTTTATGAGC AACCGGTTTT TAAACCACAT TCTACCATAC ACTAACACAG TAAAGAGAAA TCACCAATGG GTCT
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Protein sequence | MVQIALSMQP HVGEIELDSA ALIIIDMQRD FLEPQGFGEL LGNDVSKLQR AIDPCQKVLQ AARKANLTVL HTREGHRADM LDVHGHKLQR LGCASQVIGT QGPNGRILIR GEMGHDIIPA LYPVDGEAVI DKPGKGSFYG TDLEVILAAR NIRTLFVCGV TTEVCVHTTV REANDRGIHC VVVSDACASF FDDFHRVALE MVVAQGGIFG STVESKELVG AFERLTK
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