Gene PHATRDRAFT_46626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46626 
Symbol 
ID7201750 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp941188 
End bp942161 
Gene Length974 bp 
Protein Length227 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180928 
Protein GI219120377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCAGA TAGCACTGTC CATGCAGCCG CACGTCGGCG AGATAGAGCT GGACTCGGCG 
GCTTTGATCA TAATTGACAT GCAGGTAAGC AGCACGAGGG CCCGACGTAA TAACGCTATG
TACACGGTCG GTCTATAAAG CGTGAATGGA TAAACTCTAG CTTATCCAAC GTATTCTTTC
TAACCTTTTT CATGGAACAG CGCGACTTTT TGGAACCCCA GGGATTTGGT GAGCTCCTTG
GGAATGACGT TTCCAAGTTG CAAAGAGCGA TTGATCCGTG CCAAAAAGTT CTCCAAGCCG
CACGAAAAGC AAATCTTACA GTTCTTCACA CTCGAGAAGG ACACCGAGCA GACATGCTAG
ATGTCCACGG TCACAAACTA CAGCGGTTGG GCTGTGCCTC CCAAGTGATT GGTACTCAAG
GACCCAACGG ACGAATCCTC ATCCGAGGAG AAATGGGACA CGACATTATT CCTGCTCTCT
ATCCAGTGGA CGGCGAAGCG GTGATTGACA AACCGGGAAA AGGTTCCTTT TACGGTACAG
ATTTGGAAGT TATTCTGGCG GCGCGCAACA TCCGAACTCT CTTTGTGTGT GGTGTTACCA
CCGAGGTATG CGTGCACACA ACCGTTCGCG AGGCCAATGA TCGCGGTATA CACTGCGTTG
TGGTTTCTGA TGCGTGCGCT TCCTTCTTTG ACGACTTTCA TCGTGTCGCC TTGGAAATGG
TTGTCGCACA GGGAGGAATA TTCGGCAGCA CGGTGGAGTC CAAGGAACTA GTTGGAGCAT
TCGAAAGACT CACAAAGTAA CGGAAAAGGC AACGAATGCA AGCATCGCCG CAAGAATGTT
TGCTGCTTCG GTATTTCGCA CATATTGTGT GTTTATACGT GTGAAGTGCT GCAGCTCGGA
TTTTATGAGC AACCGGTTTT TAAACCACAT TCTACCATAC ACTAACACAG TAAAGAGAAA
TCACCAATGG GTCT
 
Protein sequence
MVQIALSMQP HVGEIELDSA ALIIIDMQRD FLEPQGFGEL LGNDVSKLQR AIDPCQKVLQ 
AARKANLTVL HTREGHRADM LDVHGHKLQR LGCASQVIGT QGPNGRILIR GEMGHDIIPA
LYPVDGEAVI DKPGKGSFYG TDLEVILAAR NIRTLFVCGV TTEVCVHTTV REANDRGIHC
VVVSDACASF FDDFHRVALE MVVAQGGIFG STVESKELVG AFERLTK