| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46607 |
|---|
| Symbol | |
|---|
| ID | 7201875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 879745 |
|---|
| End bp | 881191 |
|---|
| Gene Length | 1447 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181095 |
|---|
| Protein GI | 219120725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.621312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA GTAAGTCAGC AATACAATGC TTCCAAGAGA GAGACAAAAA GGCGATGCAA
CTTGACAAGA ATCGTGATTG AGAGTTTGGA AGGGTTGGTG ATCGGACTGG AATTCTCACT
CGTGGAATGC TCACTTGCGG ATGCCTTTTC TTCTTTGGAA GCAGTGTCAA TTACCACTGC
ACTCTTGGGT TTTGTCCCGG GTGCGGTAGG AGGTAGGTGT TACCGTGTCT ACGCATGAGA
AACGAAACAC CGGAATGTCG TACCCTGACA AGTGTCTTTC ATTGTGCCTT TCGTCTTGCC
ACTTTCTATG TTACGCTCTG ATACTTTGAC AAATGAACCA AACGTAGGCG TCTGCAACGT
CTTTGTTGGA CATCCTATAG ATCTCATTAA AGTTCGTCAA CAAATCGGCA CCGCGACGGC
GTCCACTGCT TCTACTACTG CTCCGTCTAG ACAGTCGTCG ATGATGCCTA TCCGTAACGG
TGTCGGCACG CTGGGTATGT TGCGCTCGAT TGCCCATGCG GAAGGACTTG CTGGCCTGTA
CGCCGGTGTC ACTGCCCCAC GACTCGCGGT CGTACCCGCC TTTGCCATAA CCTTTTCCAG
CTACGAAGCT GCGAAAGCCT GGCAATTGCG GCGCCGCGCA ACATTCCAAT CATCCCCCCA
AGCCGTTTTG ACACTCAAAG AAAGCGCTAT TGCTGGCGGC TGCTCTGGAG TACCGCTCGC
TCTCGTAATT GGCCCCTTGG AACGGATCAA ATGTCTCATG CAGATTGACA AATCGCAATA
TTCAACATTC TCCTCCAGTC TACAGTCGGT CTATCGAGAT GGCGGTTTAC GGTCTGTCTT
TCGCGGCACA GGCTTGACCA TTCTCCGTGA TGTACCCGGG AACGCTGCTT ATTTTGCTGG
ATACGAGTCC ACGCAGCGCA CTCTACGATT AAGTGAGCCG TCCCTACCGG ACGTTCTCGT
CACGCTTTTG GCCGGCGGCA TGGCCGGAGT CGCCAACTGG ATTGTCGCCA TTCCTATGGA
CGTTATCAAG TCACGATGGC AGACGGCCCC GACAACGCGA TACCGGAATT ATCAGCATGT
GTTGCAGGAT CTCCTTGCCC GAGAAGGCCC AGCTGCCCTC TTCAAGGGAC TCGGGCCTGC
ACTCCTACGG GCGTTCCCAG CCAACGCGGC CTGCTTACTT GGCGTCGAAA CCGTCAAGAC
GCTGCTGTCG TAAAATGTCG GAACACGGCT TGCGATACAA TGATACAATG TAAAGGGGTA
TAGAACGAAC CGAAAACGTC ACTGTGGTCG CATGTAGATA CCGAAAAAGC AACACAAGAA
AAAAGTCTTT TTTTACAGGA TATGTGACTA TAATCGTCAT TGACGCCCTG CCCTGCTCAT
AATGGACTTC GGTGGATTGG GATGAAAGTA AGAGAATAGA GGTATACATA AAATTTCTAC
CCGGAGT
|
|---|
| Protein sequence | MSEMSITTAL LGFVPGAVGG VCNVFVGHPI DLIKVRQQIG TATASTASTT APSRQSSMMP
IRNGVGTLGM LRSIAHAEGL AGLYAGVTAP RLAVVPAFAI TFSSYEAAKA WQLRRRATFQ
SSPQAVLTLK ESAIAGGCSG VPLALVIGPL ERIKCLMQID KSQYSTFSSS LQSVYRDGGL
RSVFRGTGLT ILRDVPGNAA YFAGYESTQR TLRLSEPSLP DVLVTLLAGG MAGVANWIVA
IPMDVIKSRW QTAPTTRYRN YQHVLQDLLA REGPAALFKG LGPALLRAFP ANAACLLGVE
TVKTLLS
|
|---|
| |