Gene PHATRDRAFT_46593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46593 
Symbol 
ID7201867 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp844034 
End bp845067 
Gene Length1034 bp 
Protein Length225 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181084 
Protein GI219120702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.78436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTA CCGCCGCGTT TTTGAGCCTG TACGGTCTTT CCATGGCCTC TTCTTTTGTT 
CCGACTGCTT ATCGTCACCC AAAGACCGTC GGAACGACGC TTCTAAGAGA TCAGATTGTT
TCTCCGTTTG ATAGTTCCGA ACGGGACGAG GGTTCCGTGG CGACGACGGA ACTGGATGCG
CCGCCTACCA AGCTGGTGGG ACCGTTAGAT TTGACCTGGG ACAATGTGGA AGCTGTGTTG
GATGAAATGC GCCCCTACTT GATTCAGGAT GGGGGTAACG TTATTATTAG TGATATTGAC
GGGCCCGTTG TCAAGCTAGA GCTTCAGGTA CGTTGGAGTG TTTCGAAAAT CGATACGTAA
CAAGGCTTGC GGGAACACTT TAGACTGACG GCAAAAACTG GCGACTGAAT TGTCTGGTTT
CTCTTTTAGG GTGCCTGCGG AACGTGCCCG TCGAGTACGC AAACCATGAA AATGGGATTG
GAGCGAGGAT TGCGCGAGAA AATCCCAGAA ATTCAGGAAG TGATTCAAGC CATGCCAGAA
GGGCCGGAAC TTACATCGGA ACAGGTAGAT GTTGTGCTGG ATGGAGTCAG ACCATTCTTG
CAGGTAGCGG GGGGAAGTAT CAACATGGAT CGTATTGATG GCGTAGATGG ACTACAGCCG
ACGATTTGGC TCAAAATGGA GGGATCATCC GCTTCCCTCA ACTCGGTCAA ACTGGAGATC
GCGCAGCGTT TGTTGCGACA CTTTATGGTA GCAGGACTTC AGGTTCAGTG GATTGTCTAG
AATGAAACAG TAGGACAAAC GCACTTCCAC TCGGGGGGGG AATAGATATT TGTATCCGCC
GCTGAAGGTA CGAATGCTGT ACAAGACGGT GTCTTCTGTA ATGGCATGTT TCGCTTGCAA
TTGGAGTTCA TGACAGAATT GCCCTTGTAC TCAGGATAGT TTCCTCGTGT ACAAGTGGTG
TAGGGAGGAC AGGAGTAACA AAATACAATT TCTTTCACAC TGAATAACTT TTAAAATAAG
TACATCTTGA GTAT
 
Protein sequence
MKTTAAFLSL YGLSMASSFV PTAYRHPKTV GTTLLRDQIV SPFDSSERDE GSVATTELDA 
PPTKLVGPLD LTWDNVEAVL DEMRPYLIQD GGNVIISDID GPVVKLELQG ACGTCPSSTQ
TMKMGLERGL REKIPEIQEV IQAMPEGPEL TSEQVDVVLD GVRPFLQVAG GSINMDRIDG
VDGLQPTIWL KMEGSSASLN SVKLEIAQRL LRHFMVAGLQ VQWIV