Gene PHATRDRAFT_46582 details

Gene Information

• Locus tag: PHATRDRAFT_46582
• ID: 7201857
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 790214
• End bp: 792583
• Gene Length: 2370 bp
• Protein Length: 561 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181076
• Protein GI: 219120685

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATC AAGGCCTCCG CGTAAAAGAC GAGTCCGCGG GGGATGGCTA CTTCTTTGCG 
TATGGTGGAG ACTTTGGGGA CACTGTCAAC GATCTTCAGT TCTGCATCAA TGTAAGTGTG 
ATCCAATGAG GCATCAGCCC TGATTGGAAT TTGGTTCTTT CTCACAACAC TTTGCTCAGG 
GTATGTTCAC GCCTGATAGA GAACCGCATC CCGCTGTCGC TGAAATTAAA TTCTTGATGC 
AGCCGGTTGA ACTTAAACCA AGCGAAAACT ATCGAGGAAA TGAAGGCCAA TTGCTTGTAC 
ATGTGGCCGG CAATTCAAAC GCGGAAATTG TCTTGAATGT GAAAAATCGA TACTCGTTCT 
CTAACCTGTC ACATCTCGTG TGGTCGTGGC ATTTGGTGAG CAACCGATCG GTAGATCCGA 
TCCGTTCCGG ATGCTTTGTC TTACAATTAA ATGGAGACAC TATCACAGCC GTCGTGGTCT 
TGGATGACGT TTTGTCGAGA GTCATGTTGT TGGAAAGAAG AGGCGCGGTC GCTGAGAACT 
CGTACTTTCT CAACATCAGA GGTTCTCTGC AGAACAAGAC GTCTTGGGCA AAATCTTCAC 
ATGTAGTAGT TGCGCAGCAA CTTCCTGTCG CTTTCCGCTT TGCGCAGCCA AAAAGTACAC 
TTGCTCAGGA AGAACAAATA ATGCAATCGA ATGAGTCGTT GCGCATGGTG GAAGATGTAA 
AATCGATATC GGTATATCGC TCATCTCTGG GTGATTCCAT TCCTTTCGCT ATCATTGATA 
AGGAGTCTGC AAGCCTGGCG TCCTATGCTC CTAATGGAAC AAATTTATTT GAGATCGGTG 
CACTTCAACA GAACTTCACC CGAGCCGCTA CAGACAACGA TCGAGGGGGT ATGGAATTGA 
CACTCAACTT TCTTCAGCTA TTCGGTTTCC TTCAAGATCT CTACGGTAGT ATTTGTGGAT 
ACGAGGATTT TTCCTACCAT AGCCACTGGA AAATGGTCGG GTTGGACCAA AAATCTCCCC 
CGGAAGTTGC TTGCATTCGT ACCCAACTGA AAGAATCTCA AAACGGAGAC GAAGCTATAG 
TCGTCGCATT TTGTACTGTT GGCCAAGATC GGGTGAAACC TTTATTTACA TTGACGGTAT 
CATATCATTT CTACCTTGAT GGTAGAGTTA AAATCTCGAA CGATGTTTTC CCATCGAAGG 
CTATTAGGAA AGCAACTTCA CTGCCTCGGG TCGGCTTATC CATTAAATTG AAAAAATGCC 
TGACCGAGGT CAAGTACTTT GGTCGGGGTC CTGGCGAGAA TTACCCCGAT CGGAAATCAG 
GCTCGGAAAT GGGAGTTTAC ACTACTTCAC CGGCTGAAAT GGGATACTCC AAGTACATTG 
TTCCTGGAGA AAACGGGTCA CGAACTGATT GTGAGTGGGT TTCCTTCAGA TCGGCCGAGG 
GTGACGGTCT GTGTGTTCTT AGTGACAGAG CTAGAAGGTG TGGATCCAGC TTCTCCTGCA 
GCGCTCTACT TTACGATGCA GCCGAGCTTC ATACGGCTAC GCATACGCTT CCGGCGAGAA 
GAGACGGCGA ACATATAGTA CATGTTAACA TTGATCATAA AATTATGGGT CTTGGAGGTG 
ATACAAGTTG GTTCCCAGGA GTCTACCCAG AATATTTGGT CAGCTCGAAG GACGCTTACA 
AGTACAGTGT GGTATTGGTT CCGTTGGAGA AAGAAGACGA TGTCGCGTTG AAAGTATATG 
GCATTCCTCG CTAGTATGAG CGGCGCCCAC AAAGTTTCCA TGCAATGCTT ATTTGCTCAA 
AATGCGCGCT GTAGCATCGA TTGCGCAACA CGATGTGGAA ACGTCCGACT CCCTGGACGT 
AGATCTCGAA ACGTGCGCTG AGTTTTCATG TCGTCGATAC CCTGTGGCCT AGCAAGAGGA 
CTCACGGCTG TATGAAAATG TGGTTTTGAT GGTTCGCCAA TAGCTGGATG AGACTTTAAT 
GTGTCTCGTC CATCAAAGCC AAACAAGGGA CATACAACGC CAAATCGCTG AACCTTCACG 
CATCCATCAA TATCTTTGGC CTTCGAAATA ACACTTGTGG ACATACCAAC TTTCATCTTT 
TGGAGAACAG TGACAAGACC AGCAAGACGA ACAAACAAGG GGACACTAGC AATAAAGAAA 
GCAGCCCCTC CTGACGCCCT GACATCCTTT GCGGTAGCGT CACTTCGACA AAGGCGGGGC 
ACGTGCCGTT TCTCATGTAC TCCCTTCGTA AGTTTCTTCG GTACAATTCA TGGGGTATAA 
TCCTCCGCCT TCTCGCAGTC ATCGACTCCC AACACTATGC TCTCGACCAT ATCACTGTTG 
GAATTAATGA CTAAACTGGA AACTGATTCC 

 

Protein sequence

MIDQGLRVKD ESAGDGYFFA YGGDFGDTVN DLQFCINGMF TPDREPHPAV AEIKFLMQPV 
ELKPSENYRG NEGQLLVHVA GNSNAEIVLN VKNRYSFSNL SHLVWSWHLV SNRSVDPIRS 
GCFVLQLNGD TITAVVVLDD VLSRVMLLER RGAVAENSYF LNIRGSLQNK TSWAKSSHVV 
VAQQLPVAFR FAQPKSTLAQ EEQIMQSNES LRMVEDVKSI SVYRSSLGDS IPFAIIDKES 
ASLASYAPNG TNLFEIGALQ QNFTRAATDN DRGGMELTLN FLQLFGFLQD LYGSICGYED 
FSYHSHWKMV GLDQKSPPEV ACIRTQLKES QNGDEAIVVA FCTVGQDRVK PLFTLTVSYH 
FYLDGRVKIS NDVFPSKAIR KATSLPRVGL SIKLKKCLTE VKYFGRGPGE NYPDRKSGSE 
MGVYTTSPAE MGYSKYIVPG ENGSRTDCEW VSFRSAEGDG LCVLSDRARR CGSSFSCSAL 
LYDAAELHTA THTLPARRDG EHIVHVNIDH KIMGLGGDTS WFPGVYPEYL VSSKDAYKYS 
VVLVPLEKED DVALKVYGIP R