Gene PHATRDRAFT_46573 details

Gene Information

• Locus tag: PHATRDRAFT_46573
• ID: 7201710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 763650
• End bp: 765767
• Gene Length: 2118 bp
• Protein Length: 694 aa
• GC content: 49%
• Product: TPR repeat-contain kinesin light chain
• Protein accession: XP_002180892
• Protein GI: 219120301

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGGAATCCC TAAACATAAA AACAGCAGGA ACAATGAGCT TACCTCGCTC CGCAATCGTA 
ACTCCCGCTC TTCATGAGAT GTACATGGAC GAGCACTCTA TGGTCCAAAT GGGAATGGTC 
GTTCGTCACA ACAATTTAGG TGTTGCGTGC ATTGAATCTG GCGCATACGA AAGGGCGGGT 
CAGTACTTTC GACGTGCGTT GGACAAGGCC AGTGAAACAA CGTTTTTCTC CTTGCCTCAG 
TCGGAAAGCT ACATCAAGCC TGGCGAAGTA TCCAGAAGTC TATACATCTA TCAACGCGGA 
GAGTATGACG AAGGAATGCA CACTTTCTCT GACCCGTTCT TCCTCGATGT GGCATTTTCT 
ACAATGCACA GTGCAACAGC AACAATTCTT TTCAACATTG GACAGTTACA CTTGCGTCTC 
GACAACAACG AGGAGGCGTC GGCTTCGTTT TTGCGAGCTT TGCATATTGC CCAGTGGAGC 
AACGAAGATA TTCTACATGA CAGCGAAGAG GGCGTTTGTG TAATGGCAAT TCTGCACAAC 
ATTGGTCATG TGCAGTACCG CAGCGGAAAC TACGAAGACG CCGTCCGGAC TTACGCCAAG 
GCACTTCATT TGGCAAAAAA TGCTTTTTGC AAGAACTCAC ACCGAATGTT GGAGGTTGCT 
GCTACACTGA ATTGTCTCGG GGTTCTCTAC TTCCATCTGC CAAAGGCGGA GACAGAGAGG 
GCCATGGAGC TGTACGTTGA GTCGCTCGCC ATACGAAATG CCGTCCACGG AGTTGACTGC 
GAAAGCACTG AGATCGCAAC AACCCTGAAC AATATTGGAC GCATCTATTA TATGAAAGGC 
GAACACGACA AGGCCCTCGA ACTATACCGT CAAGCCCTCC GCATGCGACG AAGTTTGCTC 
GGCAGCGAAC ACTTGGACGT TGCTGCCACA ATCTACAACG CCGGTCAAAC ACACCACCAA 
CGCGGCGACT TGGTCGAAGC GATGGAACTT TACAAAGAAT TTCTATCGAT TGCTCGTAAG 
CGCCTTGGTA TCCATCACAG AGATGTGGCT ATTATGCTCA AGTGTATGGC ACAGATTCAC 
CATGAACGCA AAGAATACGA AAGCGCGAAG CAATTCTATG AAGAAGCGCT ATCTGTTGGA 
AAAGCTGCCC TCGGAAACTA TCACCCTGAA GTTGCCAGTA CATTGAACAA GCTTGGCAAC 
TTGCTCTACG AAAAAGGTGA CTTGGAAAAC GCCATTCGCG TATATAAAAG CGGTTTGGAG 
GTGGAACGTG CCGTCCTCGA TGTTTTTCAC CCAAACGTTG TCGTGACCTT GACCAACATT 
GGACAAATCC ATAAACTTCG TGGAGAATAC CAGGCGGCCC TACGGCTCTA TAAAGAAGCA 
TTGGCAATTC AGCGCAATAG TCTAGGGGCT GCGCATCCGA ATCTTTCCGC CACCCTATCG 
TCGATTGCTC TGATTCATTA CCAAACACGA AGTTTTTCCA AATCTTTGGA TGTGTACCAG 
GAGGCGCTGC GCATCCGCCG CGACGCGTAT GGCGATAACA ACCTTGAAGT CGCGTCGACG 
CTCAATTCGA TCGGTTTGGT CTTGTTCAAG ATGGAACAAC ACGAACTCGC AATGCAGAGT 
TTCCAAGAAA GCCTTCGCAT TCGCCGAGAA GTGTTGGGCA AGGATCACCG CGATGTTGCT 
ATTATTCTCT ACAATATTGC AACAATTCAC ATGGAAATTG GCAACGACGA CGAAGCCATG 
AACTTTTATA GGGAAACGCT ACGTGTCGAG CGCACATCCT TGGGTGAAAA CTATCGTGAT 
GTTGTCTTGA CGACACAGCA CGTAGGTCAG GTCCACCAGC AACGTGGAGA ATTGACCGAG 
GCCCTCTACT ACTTCCAACA GGCGCTCGAT TTGCAAAAGG CGGCGCCACA ACAGAATTAT 
GGAGCTATTG CGCAAACTTT GAACCATATT GGCAATGTGC TCTTACAACG CGGTGACGCA 
CAAGGGCTCG TCCATGCATT TTCCGAGGCC TTGCGCTTCC TTCGCTTGGG AGGCAAGAGT 
AACGACGAAT TGACCGTTTC GGGATTCAAC TTTTACGGGC TTTCCAAAAT GCACCCCGAA 
TGCGCGCCTG TAGCCTAA 

 

Protein sequence

MSLPRSAIVT PALHEMYMDE HSMVQMGMVV RHNNLGVACI ESGAYERAGQ YFRRALDKAS 
ETTFFSLPQS ESYIKPGEVS RSLYIYQRGE YDEGMHTFSD PFFLDVAFST MHSATATILF 
NIGQLHLRLD NNEEASASFL RALHIAQWSN EDILHDSEEG VCVMAILHNI GHVQYRSGNY 
EDAVRTYAKA LHLAKNAFCK NSHRMLEVAA TLNCLGVLYF HLPKAETERA MELYVESLAI 
RNAVHGVDCE STEIATTLNN IGRIYYMKGE HDKALELYRQ ALRMRRSLLG SEHLDVAATI 
YNAGQTHHQR GDLVEAMELY KEFLSIARKR LGIHHRDVAI MLKCMAQIHH ERKEYESAKQ 
FYEEALSVGK AALGNYHPEV ASTLNKLGNL LYEKGDLENA IRVYKSGLEV ERAVLDVFHP 
NVVVTLTNIG QIHKLRGEYQ AALRLYKEAL AIQRNSLGAA HPNLSATLSS IALIHYQTRS 
FSKSLDVYQE ALRIRRDAYG DNNLEVASTL NSIGLVLFKM EQHELAMQSF QESLRIRREV 
LGKDHRDVAI ILYNIATIHM EIGNDDEAMN FYRETLRVER TSLGENYRDV VLTTQHVGQV 
HQQRGELTEA LYYFQQALDL QKAAPQQNYG AIAQTLNHIG NVLLQRGDAQ GLVHAFSEAL 
RFLRLGGKSN DELTVSGFNF YGLSKMHPEC APVA