Gene PHATRDRAFT_46569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46569 
Symbol 
ID7201707 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp752135 
End bp754892 
Gene Length2758 bp 
Protein Length818 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181066 
Protein GI219120665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.61135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCGT TCGCAATTCT TTGGGCTCTG CTTCTATCTG TTCGGGGGAG ACGGAGCCAC 
GGAACAGTGG AGAAATTTTT ATCAAGGACC ACTGTGGCAG AAACGCGACA GTTTGTTGCG
TCGTCCATTT TCTCTTTCGA AAATGTGCAC ACGCCGCCCC CGACCAATCC CAGCAATAGC
AGAAGTGGTT TAGTTCGAGA ATCTTGTCGG GACAAGTTGA CCGGAACAGT GAAAGAGGGA
TGGTCGATCG AAAATTATCA GTGCAAGCGG GATTCCGCAT TTTTCTACAA CGTGGTGAAC
GCTTACACGT CGGCCAATGG ACTACAAGCA GGTGCTCCAA CGGATTTGAT GCTTGAATTT
GGATCATTAG GTAATTCAGT CTCGGTGGCA TACAATCCCG AGTGTTTCGG TCTTGCAATA
CCAGGCAACG GTGGCAAACT TGTCATTATT TTGAGCGACC ATTTTGTATA CATGGGCAAA
CAGCCAACGC CCAATGAAAT CATCGAGCTA GGAGTTGCTC CGGGTAATCC CATCCTTGGC
ATACCCTGCA ATGACGGCGA TGCAGATGTT GTGTGTGGAA ACTGGAATGC CAATTTGGTT
GGAACCCACC AAATTGAGAT CATACCCCAA GGCGAAAACG GATTGACAGG ACGACGCGCT
CTGACTATCG GCGTCAAATT TGCTCACATT CACCCAAAAA TAGCTACTTC TAAAGCTATG
TATTGCAATG CCATAGGTAC ATGCGATTCC AACAAAACTG CATACTGTCT CAATCACCAG
AATTGTCCCA AAGCTGGTAA ATGCGTGGCT AAGAAATTGA AAGGAACGGT AACAGCCATG
GTGGTGGACT CCACGGGAAC TACTATACAC GAAGCCACCC ATTCCGTTCT ATTTGTTCAG
AAAGCGCCAC CTTTCACCGT CCACAACACC AATATTGGCT TGACGTCAAA CACAGAAGTG
TATGAATCGG TGACGGGGCA GTACGTTGAA CCAGGTGCGA CGGCCGACGG CTACTATCAT
AATGGCGAGT CGTTCTCTAA AGGAGGGCCA TATGCACCAC GATTCTTGGT TTTCGGTTGG
AAGAACGAGA TCTCGGGCTT TCTGCATGCC ATAGTCGACG TGACCGGTTT TGTCATTCGA
GATGACGCAC AAAAGGTTTC TATTTGAAGC AAAGGAGACG AAATTGGCGT TGCTACCTTG
ACCACTCCGG AGCAATGGGC TGAAGCATTC TTTGTTCAAT CAACTGAATC TGTTTTTGAA
GGGACGCTGA ATGATGTTGG AGGTACTGTT TTCCCTCTCT CCATCCAAGT CGGTGACGTT
CCTGGAATGT ACTCAGTCCA AGTGACTATG AAAGGTGGGT CAAGGGCAGT TTCTCAGATT
TTCGTGCCTT TGCCTCCATC CGCAGTTCCT TCGACGGTGC CATCTGATTT CATCGAGCCA
AGCAACAAAC CCACATTGCT TCCAACGAAA GAAACGCGTT TGCCTACTGT GAATCCGACC
CTTGCCAAAA GTGCTTTCCC GACGCATTCT CCAACTGCTT TACCAATAAC AACATCTCGA
CCGAACGTAC GTCCAACCGA AAGTCCTACG AGTACTTGGA TCACGCCGTC ATCGCCTTCG
CCACTTTTGT CCTTGCTCAG CTCTCGGCCT ATGGCTTCAA CGACAGTTCC GACCATGATT
CCACTGAGTC GTCCTGAGAG CTTTCAAGCA GGTTCACCTT TCCAACAAGC TAGCCCTGCC
CCTATTCCTG CTCCAACGAC AATAAGCGGG GCTCCGTCGG TGTCGCCTTC CTCGTGGCCT
AATGTTGAAT CGTCGGACAG TCCTAGCGAA AAATATTCCT TGAGCTCTAC TTCCAGGCCA
TTTGTGGAAC CACCTGAGCA ACCAACCGTT ACCCCACATG GTATACCAAC AACTTCACCA
ATCGAAGTGC CAACACAAAA TCCAACAAGA CCGACTTTGT CAAGTCTCGC TTCTTCTAGA
AACCCGACAC GAGATCCAAC CATAGGTCCT ACACACAACC CGACTTATGG GCCGACCTCG
ACTCCAACAA CAAACCCATC TATATCGCCG ACTGCCAGTC CGACGGCACC TCCCATACCG
CCCCCTACGG AGCATCCAAC TTATTTGCCA ACAGCTAATC CAACTGGTGA TCCAACGAGC
ACACGAATCA ACTTTCCCAT TGACAACTGG ACGGATTCTC CTGCTATTGT TCCCACCACT
TTGCCTACAA CGTTCTTGCA CAGCAAAGCT CAAGTTTCGA AAGTAAACAA GTCACGGCCC
AAACCAATTA TCAATGGTGG AATTCTGACT GGAGGCCTAG CGTTGATTGC GGTAGTGGTC
ACAATGATTT CGTTGATGTC GGAAGCGGCC CGTCAGTTGC TCTTCGGGCG GCCAAAGGAT
CCGCTTCTCG TTCAGAGTCG CAAGGGCCAT GATTCACGTA TGTTGTCAAA CAAGAATGCA
ATATAGTGTG TTTCAAGAGC CTGTCACGGG GATGGCGAAT TCGGCGTTTC AACTTCAGCA
TTGACAATAG CTGGTCTGTG AAGCTTCAGA TCTATGACAA ACGTTTGTAG TTCGCCTTTG
CCTGCTACGC AGCCTGAGAC ATTCCTGGAC TGTGGGGCAT AACCCTATAG GCAGCCGGTG
GAAGGTCGAT CGCTGAGAAA CCAAATGAGC GAAAGCTTAT TGACAGTGAA GCGTGCCGCG
TGGACGGGTA GACTGCCTCA CATACAGGGA ATCAATCGTT GTGAGTTCAT CACAGTCA
 
Protein sequence
MPSFAILWAL LLSVRGRRSH GTVEKFLSRT TVAETRQFVA SSIFSFENVH TPPPTNPSNS 
RSGLVRESCR DKLTGTVKEG WSIENYQCKR DSAFFYNVVN AYTSANGLQA GAPTDLMLEF
GSLGNSVSVA YNPECFGLAI PGNGGKLVII LSDHFVYMGK QPTPNEIIEL GVAPGNPILG
IPCNDGDADV VCGNWNANLV GTHQIEIIPQ GENGLTGRRA LTIGVKFAHI HPKIATSKAM
YCNAIGTCDS NKTAYCLNHQ NCPKAGKCVA KKLKGTVTAM VVDSTGTTIH EATHSVLFVQ
KAPPFTVHNT NIGLTSNTEV YESVTGQYVE PGATADGYYH NGESFSKGGP YAPRFLVFGW
KNEISGFLHA IVDVTGFVIR DDAQKQWAEA FFVQSTESVF EGTLNDVGGT VFPLSIQVGD
VPGMYSVQVT MKGGSRAVSQ IFVPLPPSAV PSTVPSDFIE PSNKPTLLPT KETRLPTVNP
TLAKSAFPTH SPTALPITTS RPNVRPTESP TSTWITPSSP SPLLSLLSSR PMASTTVPTM
IPLSRPESFQ AGSPFQQASP APIPAPTTIS GAPSVSPSSW PNVESSDSPS EKYSLSSTSR
PFVEPPEQPT VTPHGIPTTS PIEVPTQNPT RPTLSSLASS RNPTRDPTIG PTHNPTYGPT
STPTTNPSIS PTASPTAPPI PPPTEHPTYL PTANPTGDPT STRINFPIDN WTDSPAIVPT
TLPTTFLHSK AQVSKVNKSR PKPIINGGIL TGGLALIAVV VTMISLMSEA ARQLLFGRPK
DPLLVQSRKG HDSPGGRSIA EKPNERKLID SEACRVDG