Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46569 |
Symbol | |
ID | 7201707 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 752135 |
End bp | 754892 |
Gene Length | 2758 bp |
Protein Length | 818 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181066 |
Protein GI | 219120665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.61135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCGT TCGCAATTCT TTGGGCTCTG CTTCTATCTG TTCGGGGGAG ACGGAGCCAC GGAACAGTGG AGAAATTTTT ATCAAGGACC ACTGTGGCAG AAACGCGACA GTTTGTTGCG TCGTCCATTT TCTCTTTCGA AAATGTGCAC ACGCCGCCCC CGACCAATCC CAGCAATAGC AGAAGTGGTT TAGTTCGAGA ATCTTGTCGG GACAAGTTGA CCGGAACAGT GAAAGAGGGA TGGTCGATCG AAAATTATCA GTGCAAGCGG GATTCCGCAT TTTTCTACAA CGTGGTGAAC GCTTACACGT CGGCCAATGG ACTACAAGCA GGTGCTCCAA CGGATTTGAT GCTTGAATTT GGATCATTAG GTAATTCAGT CTCGGTGGCA TACAATCCCG AGTGTTTCGG TCTTGCAATA CCAGGCAACG GTGGCAAACT TGTCATTATT TTGAGCGACC ATTTTGTATA CATGGGCAAA CAGCCAACGC CCAATGAAAT CATCGAGCTA GGAGTTGCTC CGGGTAATCC CATCCTTGGC ATACCCTGCA ATGACGGCGA TGCAGATGTT GTGTGTGGAA ACTGGAATGC CAATTTGGTT GGAACCCACC AAATTGAGAT CATACCCCAA GGCGAAAACG GATTGACAGG ACGACGCGCT CTGACTATCG GCGTCAAATT TGCTCACATT CACCCAAAAA TAGCTACTTC TAAAGCTATG TATTGCAATG CCATAGGTAC ATGCGATTCC AACAAAACTG CATACTGTCT CAATCACCAG AATTGTCCCA AAGCTGGTAA ATGCGTGGCT AAGAAATTGA AAGGAACGGT AACAGCCATG GTGGTGGACT CCACGGGAAC TACTATACAC GAAGCCACCC ATTCCGTTCT ATTTGTTCAG AAAGCGCCAC CTTTCACCGT CCACAACACC AATATTGGCT TGACGTCAAA CACAGAAGTG TATGAATCGG TGACGGGGCA GTACGTTGAA CCAGGTGCGA CGGCCGACGG CTACTATCAT AATGGCGAGT CGTTCTCTAA AGGAGGGCCA TATGCACCAC GATTCTTGGT TTTCGGTTGG AAGAACGAGA TCTCGGGCTT TCTGCATGCC ATAGTCGACG TGACCGGTTT TGTCATTCGA GATGACGCAC AAAAGGTTTC TATTTGAAGC AAAGGAGACG AAATTGGCGT TGCTACCTTG ACCACTCCGG AGCAATGGGC TGAAGCATTC TTTGTTCAAT CAACTGAATC TGTTTTTGAA GGGACGCTGA ATGATGTTGG AGGTACTGTT TTCCCTCTCT CCATCCAAGT CGGTGACGTT CCTGGAATGT ACTCAGTCCA AGTGACTATG AAAGGTGGGT CAAGGGCAGT TTCTCAGATT TTCGTGCCTT TGCCTCCATC CGCAGTTCCT TCGACGGTGC CATCTGATTT CATCGAGCCA AGCAACAAAC CCACATTGCT TCCAACGAAA GAAACGCGTT TGCCTACTGT GAATCCGACC CTTGCCAAAA GTGCTTTCCC GACGCATTCT CCAACTGCTT TACCAATAAC AACATCTCGA CCGAACGTAC GTCCAACCGA AAGTCCTACG AGTACTTGGA TCACGCCGTC ATCGCCTTCG CCACTTTTGT CCTTGCTCAG CTCTCGGCCT ATGGCTTCAA CGACAGTTCC GACCATGATT CCACTGAGTC GTCCTGAGAG CTTTCAAGCA GGTTCACCTT TCCAACAAGC TAGCCCTGCC CCTATTCCTG CTCCAACGAC AATAAGCGGG GCTCCGTCGG TGTCGCCTTC CTCGTGGCCT AATGTTGAAT CGTCGGACAG TCCTAGCGAA AAATATTCCT TGAGCTCTAC TTCCAGGCCA TTTGTGGAAC CACCTGAGCA ACCAACCGTT ACCCCACATG GTATACCAAC AACTTCACCA ATCGAAGTGC CAACACAAAA TCCAACAAGA CCGACTTTGT CAAGTCTCGC TTCTTCTAGA AACCCGACAC GAGATCCAAC CATAGGTCCT ACACACAACC CGACTTATGG GCCGACCTCG ACTCCAACAA CAAACCCATC TATATCGCCG ACTGCCAGTC CGACGGCACC TCCCATACCG CCCCCTACGG AGCATCCAAC TTATTTGCCA ACAGCTAATC CAACTGGTGA TCCAACGAGC ACACGAATCA ACTTTCCCAT TGACAACTGG ACGGATTCTC CTGCTATTGT TCCCACCACT TTGCCTACAA CGTTCTTGCA CAGCAAAGCT CAAGTTTCGA AAGTAAACAA GTCACGGCCC AAACCAATTA TCAATGGTGG AATTCTGACT GGAGGCCTAG CGTTGATTGC GGTAGTGGTC ACAATGATTT CGTTGATGTC GGAAGCGGCC CGTCAGTTGC TCTTCGGGCG GCCAAAGGAT CCGCTTCTCG TTCAGAGTCG CAAGGGCCAT GATTCACGTA TGTTGTCAAA CAAGAATGCA ATATAGTGTG TTTCAAGAGC CTGTCACGGG GATGGCGAAT TCGGCGTTTC AACTTCAGCA TTGACAATAG CTGGTCTGTG AAGCTTCAGA TCTATGACAA ACGTTTGTAG TTCGCCTTTG CCTGCTACGC AGCCTGAGAC ATTCCTGGAC TGTGGGGCAT AACCCTATAG GCAGCCGGTG GAAGGTCGAT CGCTGAGAAA CCAAATGAGC GAAAGCTTAT TGACAGTGAA GCGTGCCGCG TGGACGGGTA GACTGCCTCA CATACAGGGA ATCAATCGTT GTGAGTTCAT CACAGTCA
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Protein sequence | MPSFAILWAL LLSVRGRRSH GTVEKFLSRT TVAETRQFVA SSIFSFENVH TPPPTNPSNS RSGLVRESCR DKLTGTVKEG WSIENYQCKR DSAFFYNVVN AYTSANGLQA GAPTDLMLEF GSLGNSVSVA YNPECFGLAI PGNGGKLVII LSDHFVYMGK QPTPNEIIEL GVAPGNPILG IPCNDGDADV VCGNWNANLV GTHQIEIIPQ GENGLTGRRA LTIGVKFAHI HPKIATSKAM YCNAIGTCDS NKTAYCLNHQ NCPKAGKCVA KKLKGTVTAM VVDSTGTTIH EATHSVLFVQ KAPPFTVHNT NIGLTSNTEV YESVTGQYVE PGATADGYYH NGESFSKGGP YAPRFLVFGW KNEISGFLHA IVDVTGFVIR DDAQKQWAEA FFVQSTESVF EGTLNDVGGT VFPLSIQVGD VPGMYSVQVT MKGGSRAVSQ IFVPLPPSAV PSTVPSDFIE PSNKPTLLPT KETRLPTVNP TLAKSAFPTH SPTALPITTS RPNVRPTESP TSTWITPSSP SPLLSLLSSR PMASTTVPTM IPLSRPESFQ AGSPFQQASP APIPAPTTIS GAPSVSPSSW PNVESSDSPS EKYSLSSTSR PFVEPPEQPT VTPHGIPTTS PIEVPTQNPT RPTLSSLASS RNPTRDPTIG PTHNPTYGPT STPTTNPSIS PTASPTAPPI PPPTEHPTYL PTANPTGDPT STRINFPIDN WTDSPAIVPT TLPTTFLHSK AQVSKVNKSR PKPIINGGIL TGGLALIAVV VTMISLMSEA ARQLLFGRPK DPLLVQSRKG HDSPGGRSIA EKPNERKLID SEACRVDG
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