| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46566 |
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| Symbol | |
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| ID | 7201706 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 739193 |
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| End bp | 745963 |
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| Gene Length | 6771 bp |
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| Protein Length | 2173 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180888 |
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| Protein GI | 219120293 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTGCCGTG GTTGCTTCTC GGTTGCTGAA CTGACTGTGA AATCCAACGA GTTCCACCGA
GTAGAATCGA TAGACCCTCA AGGCCTTGCA CTGCAGTGCC ATACACTGGT AAAAAAGGTG
AGCGGAGTAT TCATTCGAAC GATTGGACAT GTCGTGGTTT AGTAGCCGTC GCGCCAAGCC
AGCCAAAGAG AGCGCGTTCA ATACCGACGA CAAACCACAA AATGCTTTTG GAGGATTCGG
CGCCGTGGCG CACTTTGACG ACGGTCCCTT GCGAGACCCT CGGATGGCCA ACGACTTTCT
CGAAAGGGGA ACGAAAAACG AAAATATTCA TACGCATTCG GACACCAGTA GCGACGGTGA
CGACGCTGGT TCCGAGGCAG AGTCGGGTTC TCTCAGCGAC GATTCCTTCG TAGGAGGTCC
GCTCATGTAC GAGTCAACGT GTTCCGACGA TTCTATCACT GTAGACACTG CCGATCCAGA
TTCTCAGGAT TGGAATCTAC GAAAAGCCAA TAACTTTCTG CAGGATTTTT ACGACAAGGA
GGACCTGGAA CGGGTGTCGC AAGAACAGCA CCGTTTAAGG TCGACTGACG ACGAGAACGA
TGCAGAATCG GCATCGTCTT CCGACCAGTC TTCGGAAGAA GGCGAGTCCG ATTCGGAAAC
GCTAGAAAAA TCCCACTCTC CTCTGCATAA AACATGTAAA GATGCCGATA TTTGTCACGA
AGACCAGGAT CTGGGTACGG CCAAAATAGA CACTGCTACT ACCTTATCAA GCCACGATGC
AGAAAAATTT CCGATAGCCC CGGAAAGCTT TGACGAGGGA TATGGCGCGG AGCATGATGG
CTATGATGTT GCTCCCAACG AGTCCCAGAT ACATGAATGT TCTGAAACAG AGACGAGTTC
GCAGCATGTA GTTGTCCACG ATTTTTCTAC AGCAAGCGCC TTGAGACCGG CTGTAGCTGA
AGCAAGGTCT TTCCGCAACC TTGACAACTC ACATAGCGAT GTCAATCTTG ACGCGACAGC
TTCTTTCACA ACTAGCCTCC AGGAATCATC CACTGGTAGC GAAACTTTTG ATAGGATGGA
TCCGAAAATT GATGCTTCCA AACTGGGCTG CGATAGCGCT AGCTTAGATC ACGAAGCAAC
TTTTGGCTCT GGAAACGACC GCGATCCATC GCGGCACATG CGAGGAGACT TTCAGGGGGC
ATCGGCTGTT GATAGCGCTT ATGGCAGCTT GAGCGACGGA TCTCACAATA GTAAATGCAA
TCGAGGTAAT CATTCCGGGT CTGGCTTGGG CGAAATGTTT GGTGTTGGAA ATGCGCTCGC
CGCGAACGGT GGCTTTGGAG TTTCTCGTTG CGATGAAGAC AAAGAAACTT CCTCCAATGA
TTCAAGCTCT GATCTCTTGG TCTCTGGGAA TTCACCTGTC CACAATAAGC ATCGACATGA
AGCTGACTCG AGTTTAGAAC TTGATGCACT AGACTGTGGC GGTAGTAGAG GCGATATTTA
TCCAAATCAA AATGAACTTT TCTCTCTCGA AAGAAGGGAA GCCGAATCCA GAGAAGTAAG
CGAGTCAACC ACTCCATTGC AAACTGAACA TTCAGAAAAG AAGGTGGTAT CCACCTTCCA
CGAAGAATAT GTTGTCAACA TACACGACGT TCGTGTTGCG CTGGATTCCG AGAATGAATT
ACCTTCGAAA GATCCACTAA ACGACCAGGA TAAGCCTGAT AAAGGCAACA CTGATTGCGT
ACCTACTGCC ATCGTACAAG ATAGATTCTC GGACAAGCAT TCGTCTGCAG AAATTGAAAG
TCTTCTGTGC TCTGGTGATG AAAGTACGGG TGATGGTTTG TTGGGAGAGA GATCGTCTTC
CCATTCCTCG TCGGAACCTC GAAAGTCATG CGATCAATCA CTACAAGGAG AGAAAGAAAT
CTTTATTGAC GCTAGTCGGG AGCACATCTG TTCTGATGGT AACTTTCAAC AAGATAGGCA
AGCTTTGTAT ATCACGAATT GCGTTGAATG CTCTGAGGAT GGAGTTCCTT TCTCAGGCCG
ATTCCAATCG TGTCTATCTC AATGGAAGAA GCAATCAAGT CCTCCTCAGT CTAATCGGTC
AGGACGTGGT CTACGAGCAT TTGATGTACT TGAAGAGATT CCATTGAAAG ATGGTCGTAT
TGAGTCGTTT TCCTTGAGAG GTTCCGATGG TCTTCATGAT TCCCCAAATA CTCGTTCAGG
ATCGGCTGCA ACCAGTTGCT TCCATCCTTG TCATAGGCGA CAGGAATCAG GTGGTATGGA
AAGCGAAGTT AAGCGGTCTT GCGTTTTCCA AGACCATTCA GACAATTGTC ATGATGCCTC
CACTTCTCAT CTATCTCGAG ACGAAGACGA AAGTTCGCGA CCAGAGGAGG AAGGTTTCGT
TCCAAGAGGA CTCGTGGATG ATGACGACGA CGAATGCAAA TCAGATGACT CAAATGTTGA
CTACGTCAAT AGTCCAACGA CTGCTTTTGA GGATGATATT TACGCTAGCC GATCAGGTGA
TTTTGAAAGG GAATCATTTA TGTCAGCTGC GCCTGCTGTG GAATCCTCTC GAAGGACAGA
TCTTTCTCCA GCAATGGAGA AAAGGAGCAA CTCCTTAAAC GCAGTTGTCG CACCGGATAC
TGCACGCCTC CCTGCATTGC AGACTAGATC AGAACAACGT AGTCAGCAAA AAGGCGCCTC
CGCAGAAGGT ACAGTTTTGG ATCAAACTTT TGCCGTCAGG CTCCTGTGGG TGGCAAAAGA
GAGGCTATCG ATCAATGTTG TGAACACGAA TTGACTTTCT GGCGACCAGA TCCCCCTGAA
TCTGACCGTG ATACGAAATC TTCAAAATCT TGTGTTTCGT CGGGACTAGT GAGCACTTCG
AATAGTTGTT TGTCAGAACG TTCGCCGGTC TTGGAGGCTG GCTCTGGCTG GAAGCATTCC
AGCATCTCAG CTAGAGAAGT TATTTCTGAA AGGAACGAAA CGATTGCTTC GTCTCACCTT
ACCAACCACC AAAAAACCGA CCTTTCCTTT AAAAGCTCGT TTGTTGCAGT TGAGGAAGCG
AATTGTGAGG CGAGGTCAAC ACGAGAGTCG AAGGCTGAGC AGGATAAACG AAAGCAAAGC
CCGGAAGACC ATCCTTCTGA AAATGAAAGC GAAGACGTAT GGTATAGCCA AAGTAAATCT
CTGTCCGGCC AACAGAAAGG GTTTTTTGGC TTATTTGTTG AGAAGGATGA GAGCTCATCA
CAGAGCGCGG CAGCCTGCAG CACAAAGAAC GAAAATCTTG AGTTAGCAAG AAAGCTACTT
GCCAGTGGTT TCGACGACGA TGTCTCAGAC AGCAACAACA ACACAAACGA CTACTCCGAA
ATAAATAACT TCCGGGGATT GGTGGGAAGT AAGAAATTAG GAGGTGACTT ACATGTTGAC
GACGATCGAT CATCCTGCGA TCAATTTGAA CCACTTTTCC GGAGGAACGA ACACCCCTTG
AAAGGAAGGT ACCCGGTGGA TACCAGGCTC GAAAGTAGTT CAAATTCTTC TTCCGGTTCA
CAATTGAAAG TCGACCGATT GGAATCACTC AAAACACTGA CTCCAAGGAA TGAATCAAAT
GGTAGAGAAC CGAAGAAACG TCTGACATTG GCAGACGAAT TAGGCATCGA AGGGTTTGAC
GACAGGGAAA CCGCTGAGGT GACCGCACAA GACCTAACCA GCGACAATTT AGAAAGTAGC
TGCGCATCTC CTCACGATGA ACACACAGCT GGAGAGACAA AGAGAGTTCT TTTTCGCGAT
CAAGACGACC AAGAAGCGAA CTCTTTCGAC TCTACCTCCA CCTCCTCTGA AGATTCCGAT
TCCGACTGCG GCGACGAAAA CGATGCTAAA ATACAGTACT CAGCTACCGT TGTAGTAAAA
GAGGCACCAC TTCTACGACT TCAAAATTGC ACTTCGGTTA CACGTAGTCA TATCGCCGAA
AAGAAGGTCA GCCAGAAACT CAATGGCAAA CGATGGGGCT GGTTTAAATT CGGAAAGAGC
AAAGATAGCC AAACATCATC GCACGACTTC GTAGAAAATG AGCAATCGCA TGCAGATCTC
GAAGCGGAGG CAACTGCCGA GTCCAAGAGC GACGAAAAGG ATGGGGCAAA ATTGAATGCA
AGTTCACCTC CGTTAAAGAA AAATTCTGAA CATGGAACCA ACGACGACGA CAATAGCAAT
CTAAGTCAAC CTTTGCACAC CAATGCACCA GAACACCCAT CACAAGCGAG TCAAAGCTCG
GTAGCAACTG CAAGTACACG TGGAAGTGCT GATCAAAAAA GTGTAAAACC CGTCGCCGAC
TTTTTCAAGC CTGACGATCC AACAACTACT TTCTTTCAAA GCCAAACAGA TTCATCCAAA
TCATCGATGC TACACAAACC TACGTGGAAG GACGAAGACA GTGTAGTTTC AAAAATTTCT
GCAGCAAAAT CCACGTCCAA TGCAACTAAT ACTAGCGAGG CGACACCGTC TTCTGACGAG
CCTGTGATTG CAGATGTGGC TGTGATACAC AATCCCGAGG TAGATGCAAA AGTAATCGGA
CAAAAGAGGA AGAAGGAAAG AAAATCGAAG AAGCAGAAGA AAACAGGCCT TTCGGCGCAT
TTCGGAAATG CTCGTAAAGT CAATCGGCAC GGGGACGAAG TCAGCGTCGG AACTATGAAT
TTCAAGACAA AAGCAATAGA GCATCAGCAT GTTGTATTGT CGCAGACCAA TTTCGACGAT
TTTGTTGAGT CGGTATCCCA GCGGCGTCCA TGGGAGACGG CGCTGAAAAG GAATAGAAAG
CAACCCGCAA AATCATTAGG AGTGAATTGC GTGATTCCCG AGGGTGATGA AGACGAGGAG
GACTTGACAG ATGCAGAAAG TGTCACGGGT CTCCTTCGAA TGGAAAAAGA AATTCCCAGT
CTCTTGGAAA CCGGTAGTAG CCAAAACGCA AAGCCTAGCG AAATAGTTTC TATGGTAGAG
CTGAGGAAAA TATCATACGC GTCTGATGAC ATATCGGCTT CGAAAGGCAG ACTTCTGAGT
TCCGACAATG AAAGTGACTA CGACGAAGAA ACAATGGATG TCTTAGCTGA TATGATGTCG
CTGAGCGAGT TAGAAAGCAA GTTGTTGGAA TACGGAGACT GCAAAGAAAT TGACTTTGAA
GACATGTGGG ACGAGGTTTC AGCCGATTTG TCAACCGCCG TGGAATTCGA AAGGAAGAAG
CGTCAAAGAG ATCGCCGAAC CTTCAAAAAA GCCATGCACC GGCTCAAGAA GAATGAAGAA
AAGCACGAAA AGAAGAACAA GCGACTCAGA CTCTTCGAAC AGAGCCTGAG TACGGAGGGG
AATCCTAAAA ATGCGAAAGC ATCATTTTCA TCAGAGTTTC TAACTGCTCT CCAACAAGTG
TTTGAAGATA GCATATCGTC CGAAGATGAA GGCCTGTCTT CTGGCAAAGG CAACTCCTAT
ATTGAAGTGG AAGACGGGGC GTCTGCTCTC AAAAATGACA ACAACGTTTC CTCTGAAACG
AAAAAATCGA TTTTGCAAAA GTCTCGGCCA GAGAAGAAAT CCAGGAGGGT AGACAATCTT
TGCAACACCA TTTATACAGA GGATGAAGAA CGCAATCCCG GTACCGTTGG TGATACCATC
TCATCCAGCG GTAGCAGTTT CCTAGAAGCC AGCAGAAAGT CTGGACTGTC TTCGACTGGT
ACAAACTGCA CAAGCTTGAA AGCCTCCAGT CTAAAAAGCA AGACCACAAA ATCAAAAGCT
TCTCGCACAC ATAAAATCAA TCCAGCCGAA ATTTTCCAAG TAGAGCTCAA GCGACAACAA
GCTGCCAAAA TTTTGTCCAT ATCCAACTTG CGGCAGGAAA TGTATGACCG ACGTGGAGTT
TCGCCAGATC TACTCAAACG GGAATATGAC CAACACCGGC GCCAGTGCCT GGCCAAACGA
AATGAGTCCG ACAAGCAGCT GCAACGTAGC AGTATTGACA ATGCGCAAAA GATTAACCTA
CAGGCTCGCA CAGTGGAATT TGGCAAACCA GAATCCGCTT CCGATGTTTT TGTAGACAAG
ACCAGGTACC AAAATGAGGG TGAATTCATA GACGCGAGCC GTGGCCACGG TCATCCGCAA
CCCCTGCGGT CTCGCTGGGA TTCGAGTGAA TCAGTCAGCG AACTTGATGA TTTGCGGACC
GTTATGGAGT CGCCACCGAC CAGCCGCCCC AGTCGCGTCA TAGAGGGTGC ATCGGGATTG
GCTAACGGAG CGCTCAACAC AAGCAATGAC ATCTTCGTAT TCGCATCGAA CGCAGCGCAC
AAGTCGATGG GCGTGGCGTC GAATGTCACC CATGGAACCG TGGGTGCCGC ATCTAGTGCG
TTGCGGGTAG TGTCGACGAG GGCCGAAAAC GCGGCAATTC ATTTGCCCAA TTTCGCAACG
TTGTCGGAAG TTGGTGGCAT GCCCTTCCGT GCAAGTTTTG ACGACATGCC ATTGACAACG
ATCGGGGAAG TTGAAGACTA CGAAGATGAA AATGAGCAAG GGTTACTGGG AGCTTCCAGC
GACGACAAGT GGGACGATGC CACTTTGGGT TCTAAGTCTT ATGTATCGAG GTCGAGCAAA
TTCTCTCTCG GCGCAAAGCT CCCCAAAGTG GATCTAAAGA TCCCGAAAGT CGGCCTCAGC
GTTGGCGCCG GCCTCAAGAA GATGAAACAG ATATTGCCCA GGATGAGCAA AGATCGACAA
GGTTCAAACG GAATGATGAT GGGAGACGAT GGCCACGGAC TTTTGGGTTA G
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| Protein sequence | MSWFSSRRAK PAKESAFNTD DKPQNAFGGF GAVAHFDDGP LRDPRMANDF LERGTKNENI
HTHSDTSSDG DDAGSEAESG SLSDDSFVGG PLMYESTCSD DSITVDTADP DSQDWNLRKA
NNFLQDFYDK EDLERVSQEQ HRLRSTDDEN DAESASSSDQ SSEEGESDSE TLEKSHSPLH
KTCKDADICH EDQDLGTAKI DTATTLSSHD AEKFPIAPES FDEGYGAEHD GYDVAPNESQ
IHECSETETS SQHVVVHDFS TASALRPAVA EARSFRNLDN SHSDVNLDAT ASFTTSLQES
STGSETFDRM DPKIDASKLG CDSASLDHEA TFGSGNDRDP SRHMRGDFQG ASAVDSAYGS
LSDGSHNSKC NRGNHSGSGL GEMFGVGNAL AANGGFGVSR CDEDKETSSN DSSSDLLVSG
NSPVHNKHRH EADSSLELDA LDCGGSRGDI YPNQNELFSL ERREAESREV SESTTPLQTE
HSEKKVVSTF HEEYVVNIHD VRVALDSENE LPSKDPLNDQ DKPDKGNTDC VPTAIVQDRF
SDKHSSAEIE SLLCSGDEST GDGLLGERSS SHSSSEPRKS CDQSLQGEKE IFIDASREHI
CSDGNFQQDR QALYITNCVE CSEDGVPFSG RFQSCLSQWK KQSSPPQSNR SGRGLRAFDV
LEEIPLKDGR IESFSLRGSD GLHDSPNTRS GSAATSCFHP CHRRQESGGM ESEVKRSCVF
QDHSDNCHDA STSHLSRDED ESSRPEEEGF VPRGLVDDDD DECKSDDSNV DYVNSPTTAF
EDDIYASRSG DFERESFMSA APAVESSRRT DLSPAMEKRS NSLNAVVAPD TARLPALQTR
SEQRSQQKGA SAEDPPESDR DTKSSKSCVS SGLVSTSNSC LSERSPVLEA GSGWKHSSIS
AREVISERNE TIASSHLTNH QKTDLSFKSS FVAVEEANCE ARSTRESKAE QDKRKQSPED
HPSENESEDV WYSQSKSLSG QQKGFFGLFV EKDESSSQSA AACSTKNENL ELARKLLASG
FDDDVSDSNN NTNDYSEINN FRGLVGSKKL GGDLHVDDDR SSCDQFEPLF RRNEHPLKGR
YPVDTRLESS SNSSSGSQLK VDRLESLKTL TPRNESNGRE PKKRLTLADE LGIEGFDDRE
TAEVTAQDLT SDNLESSCAS PHDEHTAGET KRVLFRDQDD QEANSFDSTS TSSEDSDSDC
GDENDAKIQY SATVVVKEAP LLRLQNCTSV TRSHIAEKKV SQKLNGKRWG WFKFGKSKDS
QTSSHDFVEN EQSHADLEAE ATAESKSDEK DGAKLNASSP PLKKNSEHGT NDDDNSNLSQ
PLHTNAPEHP SQASQSSVAT ASTRGSADQK SVKPVADFFK PDDPTTTFFQ SQTDSSKSSM
LHKPTWKDED SVVSKISAAK STSNATNTSE ATPSSDEPVI ADVAVIHNPE VDAKVIGQKR
KKERKSKKQK KTGLSAHFGN ARKVNRHGDE VSVGTMNFKT KAIEHQHVVL SQTNFDDFVE
SVSQRRPWET ALKRNRKQPA KSLGVNCVIP EGDEDEEDLT DAESVTGLLR MEKEIPSLLE
TGSSQNAKPS EIVSMVELRK ISYASDDISA SKGRLLSSDN ESDYDEETMD VLADMMSLSE
LESKLLEYGD CKEIDFEDMW DEVSADLSTA VEFERKKRQR DRRTFKKAMH RLKKNEEKHE
KKNKRLRLFE QSLSTEGNPK NAKASFSSEF LTALQQVFED SISSEDEGLS SGKGNSYIEV
EDGASALKND NNVSSETKKS ILQKSRPEKK SRRVDNLCNT IYTEDEERNP GTVGDTISSS
GSSFLEASRK SGLSSTGTNC TSLKASSLKS KTTKSKASRT HKINPAEIFQ VELKRQQAAK
ILSISNLRQE MYDRRGVSPD LLKREYDQHR RQCLAKRNES DKQLQRSSID NAQKINLQAR
TVEFGKPESA SDVFVDKTRY QNEGEFIDAS RGHGHPQPLR SRWDSSESVS ELDDLRTVME
SPPTSRPSRV IEGASGLANG ALNTSNDIFV FASNAAHKSM GVASNVTHGT VGAASSALRV
VSTRAENAAI HLPNFATLSE VGGMPFRASF DDMPLTTIGE VEDYEDENEQ GLLGASSDDK
WDDATLGSKS YVSRSSKFSL GAKLPKVDLK IPKVGLSVGA GLKKMKQILP RMSKDRQGSN
GMMMGDDGHG LLG
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