| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46565 |
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| Symbol | |
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| ID | 7201705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 733916 |
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| End bp | 738668 |
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| Gene Length | 4753 bp |
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| Protein Length | 1545 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181064 |
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| Protein GI | 219120660 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.400003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCTCAATAC CTCGCTGGCC TGCCCATACA CAACGTTCTC CCGCCCAGCC TTTGACGAAG
CACCTTCAAG GCTTTTAGGT TTCAAGGCTT CCAGGTTTCG ACGGACGGTG AAAGAATGGG
AAACCAAACG GCGGCGGATT CCTCGTATGA GGACTTGCCG TCGGTAAACG GTGGGGATCA
CGATCTTGTG CAGCGCGTTT CGTTGCAGGA ATACTCGAGC GTCAAGGCTC ACGACGAAGA
CGAAGACGAC GAACTGAGTG ATCCAGACTT GGAGCAGCGT GGATCTCCAG CGTTGAGACG
AAGAGCACCA CCATCCAATT CATTTTCAGT CTCCTCGTTT CGTCGGGGCA ACGTTCTGCT
TTACGTATGG TTGACGATTA TCGGGGTAGT TGCCTTACTC GGAGTGGCCT TGTTGGGCTT
TCGTCACTAC TTGCTGGCAA GTGAGCACCA AACTACCAAT CTGGGGCAAA GATGGAGTCC
AAATAATCCT CCAGCAACAA GTGACGGAAA GGGAGGCGCC CCAATTGCGG TCGAGGGTGG
ATCCTCGTCG GTGTCCGGAT TTACCGTTGC TCATGATCCC AATGCTTACG CTACCTGGAA
TCCGTACAAT CTTTCCGCGG AGCACATTCG TGTCGTTCCC TCCTCTTCTG TACATGTCGG
TACCAACGGC CTAGCCACTG AAGAAGGACT GGGATATCTC ACGCAACCTA GTATCGTCAA
CAATACTGTC GTCTTTGTCA GCGAAGGAGA CTTATACTTG ACGTACTTGG AGACTACCGA
GAACTCACGT GCACAACGAC TCCCGGCCGT CAAGCTGACT ACGACTGAAG GGAACGTACG
GACGCCGGTT TTACATCCCA ATCGATCCCT CGTGGCCTTT ACCGCTACCT ACACTTCCCG
ACGCGAAGCC TACGTCATGG ATCTCGTCAC CCGTCGTACC AAGCAGGTTT CCTTCTTCGA
CAGTGCCTAC GGCGTCTCGG CGATTGCGGG ATGGTCAGAT GTCGATACGC TAGTCGTTGT
GGCTGATTCG AATCAAATCA GCTTGCCGGA TATGCGCTTG TACACGATTC GATTGCAACA
ACAACATCAA TATTTAACGG TGGATCAGGC CATGCGTGGC AAAGCCGTTT TGGATGTCAC
ACCCGTTCCC TTGGCGCAAG CGACCGAAGG TTTTTTTGAG GAAGGTTGCT GGTACTTTGT
CCGTTTCAAG CAAAGTTCCC ATACAGCTCG CTATGTGGGT GGGACAGCTG AAGCTCTGTG
GGCATATTGC GATGGACAAG CTCTGGCCTA TCCCCTTACA CCCAACTACA ACGGCACTTC
GAAAACCCCA AGTATATATG AGACTGCAAC AGAGAAGTAT TTATTGTTCT TGTCAGATCG
CAACACGGAT AATCGGCCAT CCACAATGAA TCTATGGGCA ACGCCCCTAC CGACTTCGTC
GAACCTGAAA AAGGGACACT TCGTGATGCC CAAACCAATA CAGATTACTA ACGTGGCGTG
TCAAATGGAA GGACTAGCGT TGCAAGAGTA TGCCGTCGAT CCTATCTCGA AAAAAATTGT
AATGCGGATC GGAGCAGATT TATTCGAATT GACGGCGGAG CAAGTCCAAA CCATGTTGCA
AAGCCTCAAT ACCGGCTCCA CGCCTCCCAC ACCGACTCGG TTACCGGTTC TAGTCTATTC
CGACTTTCAC GGACTCCAAG AGCGTATCCG AGTCGTGAAT GTGCTGCGCG ATTTAAAGTC
ACTGGATGTT TTCGAAACGG CCGTAGGTAC ACAGGCAGCC TTGTTGACAG TAAGGGGGCA
GTTGTTTGTC GCTCCAGTCT CGGAAAACGT GGCACACAGC AAGACGTATC AAGGCGCCGG
TCAAAATCTT CCACTTCGCC GGTATCGTGT AGCACCAGGA ACCATGACTG CCGGATCTAT
GCGAGTTTTG AGTGCGCAGT ACGTTCCCAT TTTGGCCGAT CGGAACCAAG AAAAACGTCG
GATGGCCATC GTTTTGGCCA CGGATCCACG CAGTCCGACG GCGGAGCACT CCTTTTTCCT
CTTACCGATT GACACGGATG CCGTCAACAT GTTTTCCGCA TCAGATCTTT TGCCAAAACC
CTTCTTGGGT GGCTATGAAA ATGGCGGATC GACTCGTCAA GGGGGTTTGG GCTCGGTCCG
GTCTGATAGT GTTAAAGTCA GCCCCTGCGG TCGGCGAATG GCTTGGACCG ACACGGATGG
ACGAGTGTGT CTGACAACCG TACCACTCTA TCAAAATGAA ACCAACTATA CTGTTTTGCC
ATCTAAGAAC GAACTGGGAG AGCCTATCAA TGGCGCGTCA GCAGAGCTTG TTTGGAGTCC
AGGTGGGCGC TACTTAGCCA TCAGTCATCC GGCCACCAAT CAATTTCAGG TTATTAGTAT
TGTCGATTGT GGAGACCCTA ACTCTCCAGA AGATCCAACT GAGGTGGTAG ATATTAACAT
TGGTCGGATT GTCCAAGCTA CACCTTCCCG TTTCAATTCG TACGAACCCT TTTGGGGCAT
CACCGGTAGA GACCTGTCGA CTCGGGCTAT CGAAGAAGTC CTGGCCGATC TCCAAGGCAC
TGGAAGACCG GATGAGGTAG CGACTACGCT CTACTTTCTT TCAGACCGAG ATATTCAAAC
CGAGGTTTCT AGTCCTTGGG GATCTCGTGC CCCATCGCCA TATTTTCCAA CTATGAGTGC
ATTGTACGGT CTTCCTTTGA CTTCTGTCAA TTTGGGCGAC AAAGAGGATG CGTTTATGGG
GCGATTTGCG GGTGGTGGTG TAGCTGAAGC CTTTGTTGAC CAGCTCATGG CGTTAGACAA
GCAGCTGGAG GCTCTCATGG TTGGTGATAG CAAGGACTCA AGTCGTCGAC TGGAAAAGGA
CCAAGACGTT CAAGCGCGCG CGATAGTCGC ACGGAAGCTT CAGCGATATC GTAGCCACGC
GATTTCCCGT CTGTTGGACG ACACCAAGGC TCCCACATCC GCCCCAACAA CTACAGCAGA
CCGTAAGACC GTATTTCCTT CGGACATGGA AATTGATTTT AGTGGGAAGG ACTTGACTTT
TGCTCGTCGG GCGTACAGGC TTGCTCACGT TCCGGATGCT CACTACTTAG CGATTTTGAC
ACAAGCACAG GACGATGGCA GTGTTGCTCT CGTCGAAAAT ACTGATGACG GACGAAAAGT
CAAATTATTT GTTGCTGACC CATACCCAAG CGATGGTGTT GATATTGAGA AATCATCGAT
ATCGGTCGTT GGATGGGGGC TGAGTACAAC TAGAGACTTT CTTTACCTTG TCTTTGCTTC
CGGGACGACG AAAACTATGT CAAACACCGC TGCAGGCATG ATGGCAGCGT TCCTCGATGC
CGCATCTGAC GAGAGCATTG TCGACACAAA TAACATGGCC GTTTCAATCT GGCCTCAGTT
GGAGTACGAA CAAATGTACA ACGATGCTTG GAGAATGCTA CGGGACTACT TTTACGATGC
CGACATGCAC CAAGTAGATT GGGCTGGAGT ACATGGTCGT TACAAATCTC TTGTTGTAAG
GTGCACGAAA CGCGAAGAGC TGGACGATGT CTTGGCACAA ATGGCTTCTG AATTGAGTGC
TCTGCACGTC TTTGTTTACG GAGGCGAGTA TAGCCTTCCT TTTGGGGGTG ATACGAAGAA
AATCTCCCTT CACGAGCCGG CCAGTTTAGG CGTCACATTC AAGAGAGTAC CAGAGTGGAA
GGGGTACATG ATAACCGAAA TTCCTCAACG AGATCCAGAC TTCAACACCG TCAATGGAGA
CGCGGTGTAT TGCCCTGTCT CAGGGCAAGC GTTGGAGCCG ACCGGCCAGA ATGGGCTAGA
AGTTGGCGAC GTCGTAGTTG GGGTCAACGG TGAAAGCGTC ATGCACGCAA CGGATCTCCA
CATGCTACTA CGTGGAAGTG CGGGTCGAAG TGTGCGCCTT GAAGTCCTTC GTTTAGAGTC
TGGGAATGTA CGAAGTACAA CGAACGAAAT GATCTCCGAG CCCTTGATTG TGGTGCCAAT
CACTCCAATG GCTGCCGCGG ATTTACGGTA CCAAGCCTGG GAATGGCGAA CGCGACAAAA
GGCTAAGGAG CTGGCTGTCA AGGCTGGTTT CTCAGTGGCA TACATTCACA TGCAATCTAT
GTTACAGCAT GACATGAATG CATTTGCACG CAACTTCTTC CCGGACTATG ACGCACAAGC
TCTGATACTT GATGTGCGCC ACAATCGCGG CGGCAACATC GACTCTTGGA TTCTCACTCT
TTTGCAGCGC AAAGCCTGGA TGTATTGGGG AGACCGCGTT GGTGTACGTA CAGGAGATTT
GGATTGGGAC GAACAGTTTG CGTTTCGTGG TCACATCGTG GTTCTGATCG ACGAGCACAC
GGCGAGCGAT GGGGAAGGAG TGTCCCGAGG TATTTCGGAG CTAGGACTAG GACGATTGGT
CGGAACCAGG ACCTGGGGCG GTGGCATTTG GCTGTCGTCG GACAATCGGC TGGTGGACGG
CGGTATTGCT TCTGCACCCG AAATCGGTAC CTTCAACGAT AGGCTTGGCT GGGGAATGGG
CATCGAACAA CAAGGTGTAG TGCCAGACGT CGAGGTGGAC AACAATCCTC GGACCGCCTA
CAGTGGACAC GACGAACAGC TAGAACGAGC GATTGCAGAG CTGGCAGAAT GGCTTGAGGA
AGAGCCTGTA ATTCATCCTC GTCCTCTGGA GCCCAAACAC GATATGTCGC TTCATGACAC
ATGTTCAGTG TGA
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| Protein sequence | MGNQTAADSS YEDLPSVNGG DHDLVQRVSL QEYSSVKAHD EDEDDELSDP DLEQRGSPAL
RRRAPPSNSF SVSSFRRGNV LLYVWLTIIG VVALLGVALL GFRHYLLASE HQTTNLGQRW
SPNNPPATSD GKGGAPIAVE GGSSSVSGFT VAHDPNAYAT WNPYNLSAEH IRVVPSSSVH
VGTNGLATEE GLGYLTQPSI VNNTVVFVSE GDLYLTYLET TENSRAQRLP AVKLTTTEGN
VRTPVLHPNR SLVAFTATYT SRREAYVMDL VTRRTKQVSF FDSAYGVSAI AGWSDVDTLV
VVADSNQISL PDMRLYTIRL QQQHQYLTVD QAMRGKAVLD VTPVPLAQAT EGFFEEGCWY
FVRFKQSSHT ARYVGGTAEA LWAYCDGQAL AYPLTPNYNG TSKTPSIYET ATEKYLLFLS
DRNTDNRPST MNLWATPLPT SSNLKKGHFV MPKPIQITNV ACQMEGLALQ EYAVDPISKK
IVMRIGADLF ELTAEQVQTM LQSLNTGSTP PTPTRLPVLV YSDFHGLQER IRVVNVLRDL
KSLDVFETAV GTQAALLTVR GQLFVAPVSE NVAHSKTYQG AGQNLPLRRY RVAPGTMTAG
SMRVLSAQYV PILADRNQEK RRMAIVLATD PRSPTAEHSF FLLPIDTDAV NMFSASDLLP
KPFLGGYENG GSTRQGGLGS VRSDSVKVSP CGRRMAWTDT DGRVCLTTVP LYQNETNYTV
LPSKNELGEP INGASAELVW SPGGRYLAIS HPATNQFQVI SIVDCGDPNS PEDPTEVVDI
NIGRIVQATP SRFNSYEPFW GITGRDLSTR AIEEVLADLQ GTGRPDEVAT TLYFLSDRDI
QTEVSSPWGS RAPSPYFPTM SALYGLPLTS VNLGDKEDAF MGRFAGGGVA EAFVDQLMAL
DKQLEALMVG DSKDSSRRLE KDQDVQARAI VARKLQRYRS HAISRLLDDT KAPTSAPTTT
ADRKTVFPSD MEIDFSGKDL TFARRAYRLA HVPDAHYLAI LTQAQDDGSV ALVENTDDGR
KVKLFVADPY PSDGVDIEKS SISVVGWGLS TTRDFLYLVF ASGTTKTMSN TAAGMMAAFL
DAASDESIVD TNNMAVSIWP QLEYEQMYND AWRMLRDYFY DADMHQVDWA GVHGRYKSLV
VRCTKREELD DVLAQMASEL SALHVFVYGG EYSLPFGGDT KKISLHEPAS LGVTFKRVPE
WKGYMITEIP QRDPDFNTVN GDAVYCPVSG QALEPTGQNG LEVGDVVVGV NGESVMHATD
LHMLLRGSAG RSVRLEVLRL ESGNVRSTTN EMISEPLIVV PITPMAAADL RYQAWEWRTR
QKAKELAVKA GFSVAYIHMQ SMLQHDMNAF ARNFFPDYDA QALILDVRHN RGGNIDSWIL
TLLQRKAWMY WGDRVGVRTG DLDWDEQFAF RGHIVVLIDE HTASDGEGVS RGISELGLGR
LVGTRTWGGG IWLSSDNRLV DGGIASAPEI GTFNDRLGWG MGIEQQGVVP DVEVDNNPRT
AYSGHDEQLE RAIAELAEWL EEEPVIHPRP LEPKHDMSLH DTCSV
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