| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46564 |
|---|
| Symbol | |
|---|
| ID | 7201847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 731591 |
|---|
| End bp | 733049 |
|---|
| Gene Length | 1459 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181063 |
|---|
| Protein GI | 219120658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0400699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCTGTCGGA GCTTTCCTTT ACAACCTTTA AGACCCACAA GGTCATACAT GTATTGCAAT
ATGGTACCAC AGAGGAGAGG AAGTAGAAGA CGACGACGAC AATCGCATTT GACGCAGCAA
TGTACTCGCG TCGTTTGTCT TCTGATATTG GGGAAAACGG CCTCCCAACC CGCTGAAGAA
ACGGTCGCCG CCTCGCTACC ATTGTCGCAA CCACACCTTC GCAGACGTCA CGACAACGGT
AATACCGTGG AACTTGTTCC GAATGCGACC GTCCGTCTGC CTCTGCACGC CGTCGCGGGT
ACGCATCACG TGACGGCTTG GATGGGGGAA CCGCCGCAGG CGCAAACGCT GATTGTCGAC
ACCGGGTCGC GGTTGACGGC GACCGCGTGC GAGCCCTGTT CGCAATGCGG GACGACGCAC
GCACACCCGT TCCCCCATTT GGACCCCCAG CGGTCCAGCA CGCTGCGATA CACGCAGTGT
GGATCCTGTC TGCTCAGCGG CATCCAGGAA TGCGCAGCGG AACAAAAGTG TGGTATTAAT
CAAAGGTATA CCGAAGGCTC CAGCTGGACA GCAGTGGAAG TCAGCGATAC GTTTGTCCTG
GGAGGACCGG AAATATCCAG TTTGGAACAG TACGTGAGCT TTACGATTAT CTTTGCGTTC
GGATGCCAGC AAAAAGTCAG GGGATTGTTC CGAACACAGT ACGCCAACGG TATATTGGGT
TTGGAACGGT CCGACCTCTC GCTCATTAAG CGATTGTGGA AGGAAAATGT CATTCCTCGC
GAGTCGTTCT CCCTATGCAT GACACCTTTT GAAGGCTACA TTGGACTGGG AGGACCACTA
CGAGACAAGC ATACGGAATC GATGAAATAC ACGCCGTTCA CTTCCACTCA GAGTTGGTAT
GCTGTCCACG TAGTCCGAGT GTTTGTAGGG GACGAATGCT TGACAAGCAA TGACCAGCAC
GACACTGTTG TCGAGCATGC ATTGGTCGAA GCCTTTGCAG AGGGCAAGGG TACTATACTG
GACTCGGGAA CGACGGACAC GTATCTCCCC AAGGCAGTTG CGGGTCGTAT GCGAGAAATA
TGGGCGCGCC TTTCCAACAC GCCCTTTCAA CCGTCGAGCA CGTACGCCTA CACATACGAT
GAGTTTAGAT CGCTGCCCAT CGTGACCTTT GAGCTCGCCA ACAACGTAAC CTTACAGGCC
CTGCCTAAAA ATTTCATGGA AGACCTTCCC GAGCCTTTGC GGCCCTGGAC GGGACGGAGG
AAACTAATGA ACCGCCTGTA CGCGGACGAA GTACAAGGTG CCGTGGTGGG ATTGAATACA
ATGGTGGGCT ATGACTTGCT CTTTGACGTC CAAGGCAATC GTTTTGGTGT CGCCCCGGCC
CTATGTGGAA TTGCGAACAG TACACCAGCA GCGACTCATT AAAACGGAAG CGTTTGTAAA
GGTTTTTTTT GACAATTAA
|
|---|
| Protein sequence | MYCNMVPQRR GSRRRRRQSH LTQQCTRVVC LLILGKTASQ PAEETVAASL PLSQPHLRRR
HDNGNTVELV PNATVRLPLH AVAGTHHVTA WMGEPPQAQT LIVDTGSRLT ATACEPCSQC
GTTHAHPFPH LDPQRSSTLR YTQCGSCLLS GIQECAAEQK CGINQRYTEG SSWTAVEVSD
TFVLGGPEIS SLEQYVSFTI IFAFGCQQKV RGLFRTQYAN GILGLERSDL SLIKRLWKEN
VIPRESFSLC MTPFEGYIGL GGPLRDKHTE SMKYTPFTST QSWYAVHVVR VFVGDECLTS
NDQHDTVVEH ALVEAFAEGK GTILDSGTTD TYLPKAVAGR MREIWARLSN TPFQPSSTYA
YTYDEFRSLP IVTFELANNV TLQALPKNFM EDLPEPLRPW TGRRKLMNRL YADEAIVLVS
PRPYVELRTV HQQRLIKTEA FVKVFFDN
|
|---|
| |