| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46562 |
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| Symbol | |
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| ID | 7201702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 716788 |
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| End bp | 721425 |
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| Gene Length | 4638 bp |
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| Protein Length | 1545 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181061 |
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| Protein GI | 219120654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.252798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAACC AAACGGCGGC GGATTCCTCG TATGAGGACT TGCCGTCGGT AAACGGTGGG
GATCACGATC TTGTGCAGCG CGTTTCGTTG CAGGAATACT CGAGCGTCAA GGCTCACGAC
GAAGACGAAG ACGACGAACT GAGTGATCCA GACTTGGAGC AGCGTGGATC TCCAGCGTTG
AGACGAAGAG CACCACCATC CAATTCATTT TCAGTCTCCT CGTTTCGTCG GGGCAACGTT
CTGCTTTACG TATGGTTGAC GATTATCGGG GTAGTTGCCT TACTCGGAGT GGCCTTGTTG
GGCTTTCGTC ACTACTTGCT GGCAAGTGAG CACCAAACTA CCAATCTGGG GCAAAGATGG
AGTCCAAATA ATCCTCCAGC AACAAGTGAC GGAAAGGGAG GCGCCCCAAT TGCGGTCGAG
GGTGGATCCT CGTCGGTGTC CGGATTTACC GTTGCTCATG ATCCCAATGC TTACGCTACC
TGGAATCCGT ACAATCTTTC CGCGGAGCAC ATTCGTGTCG TTCCCTCCTC TTCTGTACAT
GTCGGTACCA ACGGCCTAGC CACTGAAGAA GGACTGGGAT ATCTCACGCA ACCTAGTATC
GTCAACAATA CTGTCGTCTT TGTCAGCGAA GGAGATTTAT ACTTGACGTA CTTGGAGACT
ACCGAGAACT CACGTGCACA ACGACTCCCG GCCGTCAAGC TGACTACGAC TGAAGGGAAC
GTACGGACGC CGGTTTTACA TCCCAATCGA TCCCTCGTGG CCTTTACCGC CACCTACACT
TCCCGACGCG AAGCCTACGT CATGGATCTC GTCACCCGTC GTACCAAGCA GGTTTCCTTC
TTCGACAGTG CCTACGGCGT CTCGGCGATT GCGGGATGGT CAGATGTCGA TACGCTAGTC
GTTGTGGCTG ATTCGAATCA AATCAGCTTG CCGGATATGC GCTTGTACAC GATTCGATTG
CAACAACAAC ATCAATATTT AACGGTGGAT CAGGCCATGC GTGGCAAAGC CGTTTTGGAT
GTCACACCCG TTCCCTTGGC GCAAGCGACC GAAGGTTTTT TTGAGGAAGG TTGCTGGTAC
TTTGTCCGTT TCAAGCAAAG TTCCCATACA GCTCGCTATG TGGGTGGGAC AGCTGAAGCT
CTGTGGGCAT ATTGCGATGG ACAAGCTCTG GCCTATCCCC TTACACCCAA CTACAACGGC
ACTTCGAAAA CCCCAAGTAT ATATGAGACT GCAACAGAGA AGTATTTATT GTTCTTGTCA
GATCGCAACA CGGATAATCG GCCATCCACA ATGAATCTAT GGGCAACGCC CCTACCGACT
TCGTCGAACC TGAAAAAGGG ACACTTCGTG ATGCCCAAAC CAATACAGAT TACTAACGTG
GCGTGTCAAA TGGAAGGACT AGCGTTGCAA GAGTATGCCG TCGATCCTAT CTTGAAAAAA
ATTGTAATGC GGATCGGAGC AGATTTATTC GAATTGACGG CGGAGCAAGT CCAAACCATG
TTGCAAAGCC TCAATACCGG CTCCACGCCT CCCACACCGA CTCGGTTACC GGTTCTAGTC
TATTCCGACT TTCACGGACT CCAAGAGCGT ATCCGAGTCG TGAATGTGCT GCGCGATTTA
AAGTCACTGG ATGTTTTCGA AACGGCCGTA GGTACACAGG CAGCCTTGTT GACAGTAAGG
GGGCAGTTGT TTGTCGCTCC AGTCTCGGAA AACGTTGCAC ACAGCAAGAC GTATCAAGGC
GCCGGTCAAA ATCTTCCACT TCGCCGGTAT CGTGTAGCAC CAGGAACCAT GACTGCCGGA
TCCATGCGAG TTTTGAGTGC TCAGTACGTT CCCATTTTGG CCGATCGGAA CCAAGAAAAA
CGTCGGATGG CCATCGTTTT GGCCACGGAT CCACGCAGTC CGACGGCGGA GCACTCCTTT
TTCCTCTTAC CGATTGACAC GGATGCCGTC AACATGTTTT CCGCATCAGA TCTTTTGCCA
AAACCCTTCT TGGGTGGCTA TGAAAATGGC GGATCGACTC GTCAAGGGGG TTTGGGCTCG
GTCCGGTCTG ATAGTGTTAA AGTCAGCCCC TGCGGTCGGC GAATGGCTTG GACCGACACG
GATGGACGAG TGTGTCTGAC AACCGTACCA CTCTATCAAA ATGAAACCAA CTATACTGTT
TTGCCATCTA AGAACGAACT GGGAGAGCCT ATCAATGGCG CGTCAGCAGA GCTTGTTTGG
AGTCCAGGTG GGCGCTACTT AGCCATCAGT CATCCGGCCA CCAATCAATT TCAGGTTGTT
AGTATTGTCG ATTGTGGAGA CCCTAACTCT CCAGAAGATC CAACTGAGGT GGTAGATATT
AACATTGGTC GGATTGTCCA AGCTACACCT TCCCGTTTCA ATTCGTACGA ACCCTTTTGG
GGCATCACCG GTAGAGACCT GTCGACTCGG GCTATCGAAG AAGTCCTGGC CGATCTCCAA
GGCACTGGAA GACCGGATGA GGTAGCGACT ACGCTCTACT TTCTTTCAGA CCGAGATATT
CAAACCGAGG TTTCTAGTCC TTGGGGATCT CGTGCCCCAT CGCCATATTT TCCAACTATG
AGTGCATTGT ACGGTCTTCC TTTGACTTCT GTCAATTTGG GCGACAAAGA GGATGCGTTT
ATGGGGCGAT TTGCGGGTGG TGGTGTAGCC GAAGCCTTTG TTGACCAGCT CATGGCGTTA
GACAAGCAGC TGGAGGCTCT CATGGTTGGT GATAGCAAGG ACTCAAGTCG TCGACTGGAA
AAGGGCCAAG ACGTTCAAGC GCGCGCGATA GTCGCACGGA AGCTTCAGCG ATATCGTAGC
CACGCGATTT CCCGTCTGTT GGACGACACC AAGGCTCCCA CATCCGCCCC AACAACTACA
GCAGACCGTA AGACCGTATT TCCTTCGGAC ATGGAAATTG ATTTTAGTGG GAAGGACTTG
ACTTTTGCTC GTCGGGCGTA CAGGCTTGCT CACGTTCCGG ATGCTCACTA CTTAGCGATT
TTGACACAAG CACAGGACGA TGGCAGTGTT GCTCTCGTCG AAAATACTGA TGACGGACGA
ATAGTCAAAT TATTTGTTGC TGACCCATAC CCAAGCGATG GTGTTGATAT TGAGAAATCA
TCGATATCGG TCGTTGGATG GGGGCTGAGT ACAACTAGAG ACTTTCTTTA CCTTGTCTTT
GCTTCCGGGA CGACGAAAAC TGTGTCAAAC ACCGCTGCAG GCATGATGGC AGCGTTCCTC
GATGCCGCAT CTGACGAGAG CATTGTCGAC ACAAATAACA TGGCCGTTTC AATCTGGCCT
CAGTTGGAGT ACGAACAAAT GTACAACGAT GCTTGGAGAA TGCTACGGGA CTACTTTTAC
GATACCGACA TGCACCAAGT AGATTGGGCT GGAGTACATG GTCGTTACAA ATCTCTTGTT
GTAAGGTGCA CGAAACGCGA AGAGCTGGAC GATGTCTTGG CACAAATGGC TTCTGAATTG
AGTGCTCTGC ACGTCTTTGT TTACGGAGGC GAGTATAGCC TTCCTTTTGG GGGTGATACG
AAGAAAATCT CCCTTCACGA GCCGGCCAGT TTAGGCGCCA CATTCAAGAG AGTACCAGAG
TGGAAGGGGT ACATGATAAC CGAAATTCCT CAACGAGATC CAGACTTCAA CACCGTCAAT
GGGGACGCGG TGTATTGCCC TGTCTCAGGG CAAGCGTTGG AGCCGACCGG CCAGAATGGG
CTAGAAGTTG GCGACGTCGT AGTTGGGGTC AACGGTGAAA GCGTCATGCA CGCAACGGAT
CTCCACATGC TACTACGTGG AAGTGCGGGT CGAAGTGTGC GCCTTGAAGT CCTTCGTTTA
GAGTCTGGGA ATGTACGAAG TACAACGAAC GAAATGATCT CCGAGCCCTT GATTGTGGTG
CCAATCACTC CAATGGCTGC CGCGGATTTA CGGTACCAAG CCTGGGAATG GCGAACGCGA
CAAAAGGCTA AGGAGCTGGC TGTCAAGGCT GGTTTTTCAG TGGCATACAT TCACATGCAA
TCTATGTTAC AGCATGACAT GAATGCATTT GCACGCAACT TCTTCCCGGA CTATGACGCA
CAAGCTCTGA TACTTGATGT GCGCCACAAT CGCGGCGGCA ACATTGACTC TTGGATTCTC
ACTCTTTTGC AGCGCAAAGC CTGGATGTAT TGGGGAGACC GCGTTGGTGT ACGTACAGGA
GATTTGGATT GGGACGAACA GTTTGCGTTT CGTGGTCACA TCGTGGTTCT GATCGACGAA
CACACGGCGA GCGATGGGGA AGGAGTGTCC CGAGGTATTT CGGAGCTAGG ACTAGGACGA
TTGGTCGGAA CCAGGACCTG GGGCGGTGGC ATTTGGCTGT CGTCGGACAA TCGGCTGGTG
GACGGCGGTA TTGCTTCTGC ACCCGAAATC GGTACCTTCA ACGATAGGCT TGGCTGGGGA
ATGGGCATCG AACAACAAGG TGTAGTGCCA GACGTCGAGG TGGACAACAA TCCTCGGACC
GCCTACAGTG GACACGACGA ACAGCTAGAA CGAGCGATTG CAGAGCTGGC AGAATGGCTT
GAGGAAGAGC CTGTAATTCA TCCTCGTCCT CTGGAGCCCA AACACGATAT GTCGCTTCAT
GACACATGTT CAGTGTGA
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| Protein sequence | MGNQTAADSS YEDLPSVNGG DHDLVQRVSL QEYSSVKAHD EDEDDELSDP DLEQRGSPAL
RRRAPPSNSF SVSSFRRGNV LLYVWLTIIG VVALLGVALL GFRHYLLASE HQTTNLGQRW
SPNNPPATSD GKGGAPIAVE GGSSSVSGFT VAHDPNAYAT WNPYNLSAEH IRVVPSSSVH
VGTNGLATEE GLGYLTQPSI VNNTVVFVSE GDLYLTYLET TENSRAQRLP AVKLTTTEGN
VRTPVLHPNR SLVAFTATYT SRREAYVMDL VTRRTKQVSF FDSAYGVSAI AGWSDVDTLV
VVADSNQISL PDMRLYTIRL QQQHQYLTVD QAMRGKAVLD VTPVPLAQAT EGFFEEGCWY
FVRFKQSSHT ARYVGGTAEA LWAYCDGQAL AYPLTPNYNG TSKTPSIYET ATEKYLLFLS
DRNTDNRPST MNLWATPLPT SSNLKKGHFV MPKPIQITNV ACQMEGLALQ EYAVDPILKK
IVMRIGADLF ELTAEQVQTM LQSLNTGSTP PTPTRLPVLV YSDFHGLQER IRVVNVLRDL
KSLDVFETAV GTQAALLTVR GQLFVAPVSE NVAHSKTYQG AGQNLPLRRY RVAPGTMTAG
SMRVLSAQYV PILADRNQEK RRMAIVLATD PRSPTAEHSF FLLPIDTDAV NMFSASDLLP
KPFLGGYENG GSTRQGGLGS VRSDSVKVSP CGRRMAWTDT DGRVCLTTVP LYQNETNYTV
LPSKNELGEP INGASAELVW SPGGRYLAIS HPATNQFQVV SIVDCGDPNS PEDPTEVVDI
NIGRIVQATP SRFNSYEPFW GITGRDLSTR AIEEVLADLQ GTGRPDEVAT TLYFLSDRDI
QTEVSSPWGS RAPSPYFPTM SALYGLPLTS VNLGDKEDAF MGRFAGGGVA EAFVDQLMAL
DKQLEALMVG DSKDSSRRLE KGQDVQARAI VARKLQRYRS HAISRLLDDT KAPTSAPTTT
ADRKTVFPSD MEIDFSGKDL TFARRAYRLA HVPDAHYLAI LTQAQDDGSV ALVENTDDGR
IVKLFVADPY PSDGVDIEKS SISVVGWGLS TTRDFLYLVF ASGTTKTVSN TAAGMMAAFL
DAASDESIVD TNNMAVSIWP QLEYEQMYND AWRMLRDYFY DTDMHQVDWA GVHGRYKSLV
VRCTKREELD DVLAQMASEL SALHVFVYGG EYSLPFGGDT KKISLHEPAS LGATFKRVPE
WKGYMITEIP QRDPDFNTVN GDAVYCPVSG QALEPTGQNG LEVGDVVVGV NGESVMHATD
LHMLLRGSAG RSVRLEVLRL ESGNVRSTTN EMISEPLIVV PITPMAAADL RYQAWEWRTR
QKAKELAVKA GFSVAYIHMQ SMLQHDMNAF ARNFFPDYDA QALILDVRHN RGGNIDSWIL
TLLQRKAWMY WGDRVGVRTG DLDWDEQFAF RGHIVVLIDE HTASDGEGVS RGISELGLGR
LVGTRTWGGG IWLSSDNRLV DGGIASAPEI GTFNDRLGWG MGIEQQGVVP DVEVDNNPRT
AYSGHDEQLE RAIAELAEWL EEEPVIHPRP LEPKHDMSLH DTCSV
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