| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46560 |
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| Symbol | |
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| ID | 7201700 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 708160 |
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| End bp | 711988 |
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| Gene Length | 3829 bp |
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| Protein Length | 1245 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181059 |
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| Protein GI | 219120650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.585047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTCTC ACCTTGTCCT CGGCTTAGCC ATTCTTTTCC TTGGCGCTAG CCAGTGCAAC
AGCAACCTGA TTCGTGGTAA TTCTTCGATG TCTGCGAGCG AAGCCGGCGA TTCTGAAGCG
CTAACAACAA CCTTATCTCG GCGTCTTGTC GAAAATTTTG TTCCTTTGAG GTGCAATGCT
GCCATCGGTA AAGCCCCTTG TTCATCTTTC GTCACGATGT TTGGCAATGA CTCTGTTCGA
TCAAACAGAG TCATTATTCC ATGTGGCAAG TGCGTTACAA TGGACTATCC GGGACCGCAA
CTAACACTAA ATGATGGCAT CGACATACGA GGCAAACTAG TGTTTCCAGA CGGATACCGA
CTCACGGTTC GGACGAACTT GGTGTCGGTC CAAGGCGAGC TTGAGATGAG AAGTTCTAAA
CCAGTTGATG GAAACCCCGA TGTACGGTTT GTAATGCAAG GTACTGAGAG TGCGTCGTTC
GCACCGATCA GCAGCAACGC CGCAAAATGT GGAGGAAATT GCGATGCAGG AGCTCGATCC
ATTGCAGTGG CTGGTGGGAA GGTCAATCGT AAGTTCGGAT TGTTGCGAAA ATGGCATCCG
CATTTCCTGC ACACATATAC GTGACTGTCG GCACTTACAG AAATCCCTAA TTGTTGCAGT
CAATGGCCTA CCTACTAGCA CACCAACCTG GCTACATATC CAAGACGTCC TTGGTAGCTC
GGCTATTGTT GTGTCCAATT CGGTCCGTAA TAAATGGGCT ACTGGTGCAA CTATTGTTAT
CACCTCCGAA CACCAAGGTT ACTTTGGCGA GCAAGTTCGT AAAATCACCA GCATTTCGAA
CGTCGGCTCC AATAGCGTCC GTCTCAATCT CGACCAACCC ATCAACCGTC CGGTCACGCT
TCGCGACAGC CCAGACTTTG CCACCGAGGT AGCCTTGCTG TCACGCAACA TTGTCTTTGA
AGGGGCCCCC GGAACGAAGG GTGGCCACTT TTGGATCATG CACACTCCCC GAGTGAGGCA
GCGTATCGAA GGAGTGGAAC TCGTTAACTT CGGACAAGAA GGCCTCTTGG GTAGATACCC
AATCCACTTT CACATGTGCG GGGATGTCTC AGGCTCGGTA GTAGTCAAGA ATACCATTCG
CAATTCCAAC CAGCGCTGCA TTGTCGTCCA CGGCACTAAC AACCTCCTTG TTCAAGAAAA
TGTAGCCTAT TTCACCAAAG GGCACTGTTA CATGTTGGAA GATGGCATCG AGACGGGCAA
TCAGTTTGTG CGAAACATTG GCATACGCAC CGTCAAACCG GAGGTCATCA TTCCGAACAT
GGGTAGCAAT GGCAAGGAAT CTGATAGGTC TGCCAGTACC TTCTGGATCA CGAACGCTGA
CAACTCGTGG ATCGGAAATG TAGTAGCCGG ATCCGAAGCT CTGGGCTTTT GGTTTGAGCT
GTTGGTCCGT GGAAACCTGG CCAACGAGCA CCAAGACTTT GATCCTATGA TGGTTCCGAC
CCGCAAGTTC GAGGACAACG TCGTTCATAG CGTATTTGGG GTAGGGATGA CCTACTATTT
GAGCGGTTAC ATCCCGGAAA CACTGCAGTA CTTCAAAAAC AACAAGTTCT TCCGCAACCA
TCACCTTGCG CTCCGTATCC ACCGGTCACG AAACATCGTT CTGACTGGCA ATAAGTTCTC
GGACAACAGA TATGCCATTC AAATCGATCG TGACGAAGAA ATTCATGTCA CCGACACAAC
CATTGTTGGC TATTCCGATC TATTCAAGGA CGTGGTCAGA AGGAATCGCT TTGCCCAAGC
ACCTTGCGCC CAAGGGATAT CTTTCCAATC GACTAATCCA TGGCAGAAAA AGATGGATTC
GGAGCTCAAC GGTGTCATTT TGGACAAAGT CAGATTTTCT GGATTTTCCA ACGCGGTGTG
TTCGTCTTCA ACCGCAATCG AGCTGGATTC CCGACTCGAC GGGTACAAAT CGTTCGAGAT
GTTCTCACAG TACTCCGGCG CCACCGTAAG TGACGCAAAC TCGATCGACT TTTGTCGTGG
AAAGTCTGCC GGTGCACGTG ATGTGTACGT GTCCGATACC ACAGGTTCTC TTCTCGACGG
CGTTGCCTCT GCTCCTTCTA CTCTGATGGT CAACTCGCCG GAGCTGGCAA GCTTTGTCAA
TCCCAGTGCA TGTACCGAAA ACGCAGCTCG ATGCTACACC TACTGTAGCA ACACTTGCTT
CCGCACCGTT CACTACTACG TCCCAGTGGG CCAAAGTCGA GACTACAAGC TCAAAGTATG
CGACCGCAAG GACGCGTCCG ACTGTACCGT ACTCTCCGGT TACGTACACT TTAACCACCC
CTGGCCTCGC CGATTTGCCG TGCATGTCCC GTCAGGACGG GAGTACGACA CTTACTTCCT
CGACAAGGGA GTGCCTGTGT ACCCAACGAA TGTCGAGATT GTGTTCCAGG AAAAGCTTTG
CCCAACGGCA CCGGATGATG ATGATATCGC TCTTCTCTAC AAGGCTCGAG GTACCACCTT
TCCCCCCACG CCTAGTCCGA CGACAGCTCT CGCCGCATGT GGAAACTTGA TCGCAAACTC
GGACTTTGAG CGTGGTTTCA ACGGATATTG GGATGCACAA GGAGTCGGTA CATTGTCTAC
CACAGCTGGC TATAAATCTG CCACAGCTAT GTACTACGCC TCTGGTAATC GCAACCGGTA
CTGGGTGGGA CCATCACACC AATGGCGAGA AGGTCTGGAC TTGAAATGTC TAAAGCAGGG
TACCACATGG GAGTTTTCTG CTCGCTTGAA GCTTGTCGAC TCAACGACTG GAAGGGGAGC
CTCATGTAAC ACAGGCTCGT CCTCGGAAGG CGAAATGTGC CCTCAGGTGC AGCTCATTGT
GCGCGACCAA TCTTGGACTC AGCATTCTTT CAGGGTCAGC GGCTTCGACG GTGGGGACAC
TTGGGTAGCC AATGGGTTTA ACGAGTTCAA AGGCTATTGG ACAATCCCAG CGAATGGTTC
AGGATGGCAA GGGGGTGTCG CAAACATGCG AGTGATACTT TCCGAATTCC CATTTGGTAT
GGATCTGGTT GTTGACGATT TCAGCATGGT ACTGACGCTT GACACGAACA AGAGTCTCGC
ACAGTCTCCA ACCTTGAGTC CGGTGCTGGC CGTGCCTCCT CCAACCCAAG CTCCTATCCG
CATCCCAACT CAGGCTCCTG TCCGCATTCC AGCACAAGCT CCAATCCGCA TTCCAAACGA
AAGTCCGCTG ATTGGTCCCG GAACGGACCT GAATGCATGC GCTAAGATGA TCGCGAATTC
CAACTTTGAT CTGGGGTATG AGGGATACTG GTCAGTTCCT AGCGGCGGAA GTCTGTCAAA
CAAGGAAGGC TTCAGTTCCT CGACTTCCAT GTACTACGAT TCTGGGAACC GGCGAAGATA
CTGGATAGGT CCTGAGTACA AATGGCCAAA TGGTGTTGAA TATGGGTGTT TGTTGCAAGG
AACAACATGG AAGTTTACCG CTAAATTTCA ACTTATCGAC GCTGCAACTG GTAAAGGAAG
CTCTTGCAGC GTTAATTCAA GTAAAGAAGG AGAAATGTGT CCCCGCGTTC GACTGACTCT
CCGAGACGAT GGGTGGACTC TTCGAAACGT GAGGATCGAT GGATTCAGCG CGGCGGATAC
CTGGGACGCC AACGGCATGA ATTCGTTCAC GGGCTACTGG ACTGTCCCAG AAGACGGCCC
GGACTGGCAG GGTCGTGTCC GTAATATTCG CTTGGCGATT GTTGATTTTC CCTTTGACAA
GAATCTAGTC GTTGATGATT TTCAGATGGC GTTTTTCAAT ACGAACTAG
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| Protein sequence | MYSHLVLGLA ILFLGASQCN SNLIRGNSSM SASEAGDSEA LTTTLSRRLV ENFVPLRCNA
AIGKAPCSSF VTMFGNDSVR SNRVIIPCGK CVTMDYPGPQ LTLNDGIDIR GKLVFPDGYR
LTVRTNLVSV QGELEMRSSK PVDGNPDVRF VMQGTESASF APISSNAAKC GGNCDAGARS
IAVAGGKVNL NGLPTSTPTW LHIQDVLGSS AIVVSNSVRN KWATGATIVI TSEHQGYFGE
QVRKITSISN VGSNSVRLNL DQPINRPVTL RDSPDFATEV ALLSRNIVFE GAPGTKGGHF
WIMHTPRVRQ RIEGVELVNF GQEGLLGRYP IHFHMCGDVS GSVVVKNTIR NSNQRCIVVH
GTNNLLVQEN VAYFTKGHCY MLEDGIETGN QFVRNIGIRT VKPEVIIPNM GSNGKESDRS
ASTFWITNAD NSWIGNVVAG SEALGFWFEL LVRGNLANEH QDFDPMMVPT RKFEDNVVHS
VFGVGMTYYL SGYIPETLQY FKNNKFFRNH HLALRIHRSR NIVLTGNKFS DNRYAIQIDR
DEEIHVTDTT IVGYSDLFKD VVRRNRFAQA PCAQGISFQS TNPWQKKMDS ELNGVILDKV
RFSGFSNAVC SSSTAIELDS RLDGYKSFEM FSQYSGATVS DANSIDFCRG KSAGARDVYV
SDTTGSLLDG VASAPSTLMV NSPELASFVN PSACTENAAR CYTYCSNTCF RTVHYYVPVG
QSRDYKLKVC DRKDASDCTV LSGYVHFNHP WPRRFAVHVP SGREYDTYFL DKGVPVYPTN
VEIVFQEKLC PTAPDDDDIA LLYKARGTTF PPTPSPTTAL AACGNLIANS DFERGFNGYW
DAQGVGTLST TAGYKSATAM YYASGNRNRY WVGPSHQWRE GLDLKCLKQG TTWEFSARLK
LVDSTTGRGA SCNTGSSSEG EMCPQVQLIV RDQSWTQHSF RVSGFDGGDT WVANGFNEFK
GYWTIPANGS GWQGGVANMR VILSEFPFGM DLVVDDFSMV LTLDTNKSLA QSPTLSPVLA
VPPPTQAPIR IPTQAPVRIP AQAPIRIPNE SPLIGPGTDL NACAKMIANS NFDLGYEGYW
SVPSGGSLSN KEGFSSSTSM YYDSGNRRRY WIGPEYKWPN GVEYGCLLQG TTWKFTAKFQ
LIDAATGKGS SCSVNSSKEG EMCPRVRLTL RDDGWTLRNV RIDGFSAADT WDANGMNSFT
GYWTVPEDGP DWQGRVRNIR LAIVDFPFDK NLVVDDFQMA FFNTN
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