Gene PHATRDRAFT_46518 details

Gene Information

• Locus tag: PHATRDRAFT_46518
• ID: 7201673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 583907
• End bp: 587152
• Gene Length: 3246 bp
• Protein Length: 1081 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002180861
• Protein GI: 219120236

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.42154
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTGG GTGAAAGCCT TAAACTTTGT GTTGCTGATA CTATGAAAAC TGACTATCGA 
CAAACTCTCG ATCTCGAGGC GAGCGGAAAT CAGGTTGCCT TAGCCGGGAA GTCTATCGGT 
GCCAGTTTCG AGACGTTCAT CATGGATGAT ATAAATGGAA ATTTACCCAG TTATGATTGC 
CGGCTCCTTA ACACTAATCG TGTCTACGAC AACGACGGTG AGGATCTACT GGGTCAAGGT 
TTTTTCATCC TCGAGGTCAT TGTGGAACAA AGGGTATATG TAACGGCTAC CGACACCTTG 
ACAATAGAGC AAGTAACAAG TCTTGTCGGA TTGGGTTTCA ATCGAGGTGA TGGCGGTCGA 
GTCAAGTTTC GGTCTTTGCT ACAACAGTAC GAAGCGTTCG AAAGCATCTT GAATGTTGAA 
GTATTAGAAA GTGTATCGTC ACCACAGGCC GCCCCTTCGT CCATACCGAG TACTTTTCCA 
TCCGGCAAGC TCTCCTTTGC TCCATCTCCA GCACCAACTA TAACGCCATC AGCTGTACCT 
ACGGATCAAC CGTCGCATCG TCCCTCGATA TTCTCGACTG CTATGACTAC GAACTCACCA 
TCTTTCCCGC CATTCAATGT ACCAATGTCA TCAACACCTT TGAAAGCTCC AACACTACTG 
CCTGCGGCTT TGCCCACAAC TTTGGCCCCA AGTTCTCCGA GCTCGTCCAA GTCCAACAAT 
GATGGTTTAC CTTTAATTAT CGGCACAACT ATTGGGGGGG TGTTGACTAT GCTGGTGTGC 
TGTTTTTTCG TCTTTTGTGT ATGGTTTCCC TATTGGCGTG AGGGGAACAC CGGCGACGGC 
AATGGGCCGA ATCGGCAATT TGAAACGAGC AGTCAAATGT CATCGGGACG TGACACTATT 
GTCCCGGGTG TGGTTCAGTT GGATGATGCG TCCTTGGCTA ATACTACTTT GGGAGATGAG 
ACAACAGATG GTGGCTTTCG CAACAATTCT GCCGAGAGCA AGAGACCGCA ATATTCGTTT 
CTCAAACCAG CCCCAATCGC ATCAATGGAC AGTTTTGACG AGAGCTCTCT GTACACTTCA 
CCCGGACCAC CCGCTAGCAA CGCAAACCAA AGCAGTTTAC GCATAAGTTC CATAGCCATG 
GCTGCGGTAA AGCCCCCGGT TATGTCCAAG ATTGACACAT CCATGGAACT GAACCCCAGT 
CTGAGCCTTG CCCTTCACTT TGAAGACGAC ATCGTCTTTC CCTTGTCTGA GAGTAAAACG 
GATTGGAGCA CCGAAAAGCG AGCTACAGTG CACAAGGATT CCATGCATTC GGTGCTCACG 
GGCGGCGGAG TCGTGGATCT AGATGAGGTT TATTTCTTTG ATGACGACGA GTCGAAGGAG 
GAAGGCTTTG AGCGAGTGCC CGGTATACCT GGCAAACTGG CAATTACGTC TTCTAAGAGT 
GACGAAGAAA AAGCTCGCAA AGTGTCTCAA TCAATGGAAG AAGGTACTAG AGGTTTCGAT 
CCATTTGACG AAGAGAAGTC TGGGTCGTCG TCGTCGTTCA CTTTTGACAA CGGAGTGGAG 
ACGGCTGAGA TCTTCAAAGA AGACTCCTCG TCCGATACGG AAGAAGACGA GAGTTTGCCC 
GTGACTAACC CACACCAGTC CAAACGAGTG ATGCCCCTGC TGTCAGGGAG TACTCCCGAG 
GCCAACGATA CCCAAAGAGG CATTCAGCCT TGTGATGTGC ATAGACGAAA GTTGATCAAC 
AACATTGGAG AAGGCGCTCT GGATACAATA GAACTAAACA GGAATGGGCA CGATAGCAAA 
GGCGACGATA CCCAAAGAGG CATTCAGCCT TGTGATGTGC ATAGACGAAA GTTGATCAAC 
AACATTGGAG AAGGCGCTCT GGATACAATA GAACTAAACA GGAATGGGCA CGATAGCAAA 
GGCGACTTAA AAGAGAAGCA GAGAGAAGCA CGCCTCTCAA GGTCAGCAAG AAAGAACAAT 
TCGTTGCTCC GGAATGTTCT AGAGGATGCC CGTCGTTTAG CTGAGGCTGC AACTTCTAAC 
AATCGTTCCA GAGCTTCTCG AAAGACGGCA CCACCGCGAA TTGTCGACAA AATCAAACGC 
AACTCGCACG ATAGCCAGCC TTTTGATTTA CTAGCTGATA CATTAGACGT GAAGGAGTCT 
CTTTCTCTTG CTTCGGCAAA ACGCCCCGCG CATTCCACGA AAGGGAAGGT TGTCTCAAAG 
ATGACTGCTG CGCGGTCGAG AGGAAGCGGA GATTTGACAA GCGACAATGA TCATGCTAGA 
ATTAAGGCCT TTGCAAGTAC ACATCTCTTC CGCAGTCGTC TTCTGGGCAA AAGAGAGGCA 
GGGACTGGTC AGCATAGTTT GCCTTCATCA ACCACTTCGA ATTCTTCATT GCGGCTAACT 
GTAAATGTTG AAGCTGAAAT CACTGATGCG ACGTCTGCTT TCGATGCCAG CTCGGTCCTA 
ACCTCTGCAA ATCCAAGAGA TTCTCCACAA GGCAAGTATG CTGGTCAATG CCCGGAAAAC 
CAGAGTGTAT TGTCACCCCC CAACAACATA GAAATTTTAT ACCCAAACGG AAAAATAACC 
GTACAGGACG ATTTGTCATG CACACGGGAA GGCGCTCCAA AACCTTTGTT AACTGATGCG 
GTGGATAAAG CTCCTGAAGC TTGTTCTACA ACTGATATTA AGTCGACAAG TGTATGGTCG 
ATCGCGCAAT CATCTCAACC ACAACGGTCT CGAAATTCAC GGTGTGGGTC AATATCAAGT 
ACGGGACGAC AGCTAGAAAG ATCGCCGGTA TCTACCCAGT CACGGCGGCA GAATCGGCGC 
CTTTTGCGTG ATGAGATTGG GAGCTCCAGT CGCACCTTTT CTTCCGCCCC AGAGAGGTCC 
CAAGGAGAAG AAAAGAGTTT GGGTGACGAC ACCCTGCCTC TGGCATTTGA ACAGGATTTG 
GAAAGGCTTA AGCTGCAGCT CGTAGATATC GTGCGCACCG ATGCATTCAA GGTTGGTCCC 
TCTTCAATAA CAGCGTCTAA GACAAATCGA TCCATTGCCT TCGTCAGGAA GAATAAGAAA 
GACCAAATTG TTGTCATCGT CCCCCCAGGG AAGGTTGGAG TGGTTCTCGC AAATCGGTAC 
GATGGAAAGG GAACGATGGT GTCGGAAGTT CGGCCTTCTT CAGCTGTTCA TGGGGCCATT 
TTCCCCGGAG ATGAAATTGG TACGTTAGTG ACTGTGCTTA CGATTGTTGT CGCCAACATT 
GCTTGA 

 

Protein sequence

MQLGESLKLC VADTMKTDYR QTLDLEASGN QVALAGKSIG ASFETFIMDD INGNLPSYDC 
RLLNTNRVYD NDGEDLLGQG FFILEVIVEQ RVYVTATDTL TIEQVTSLVG LGFNRGDGGR 
VKFRSLLQQY EAFESILNVE VLESVSSPQA APSSIPSTFP SGKLSFAPSP APTITPSAVP 
TDQPSHRPSI FSTAMTTNSP SFPPFNVPMS STPLKAPTLL PAALPTTLAP SSPSSSKSNN 
DGLPLIIGTT IGGVLTMLVC CFFVFCVWFP YWREGNTGDG NGPNRQFETS SQMSSGRDTI 
VPGVVQLDDA SLANTTLGDE TTDGGFRNNS AESKRPQYSF LKPAPIASMD SFDESSLYTS 
PGPPASNANQ SSLRISSIAM AAVKPPVMSK IDTSMELNPS LSLALHFEDD IVFPLSESKT 
DWSTEKRATV HKDSMHSVLT GGGVVDLDEV YFFDDDESKE EGFERVPGIP GKLAITSSKS 
DEEKARKVSQ SMEEGTRGFD PFDEEKSGSS SSFTFDNGVE TAEIFKEDSS SDTEEDESLP 
VTNPHQSKRV MPLLSGSTPE ANDTQRGIQP CDVHRRKLIN NIGEGALDTI ELNRNGHDSK 
GDDTQRGIQP CDVHRRKLIN NIGEGALDTI ELNRNGHDSK GDLKEKQREA RLSRSARKNN 
SLLRNVLEDA RRLAEAATSN NRSRASRKTA PPRIVDKIKR NSHDSQPFDL LADTLDVKES 
LSLASAKRPA HSTKGKVVSK MTAARSRGSG DLTSDNDHAR IKAFASTHLF RSRLLGKREA 
GTGQHSLPSS TTSNSSLRLT VNVEAEITDA TSAFDASSVL TSANPRDSPQ GKYAGQCPEN 
QSVLSPPNNI EILYPNGKIT VQDDLSCTRE GAPKPLLTDA VDKAPEACST TDIKSTSVWS 
IAQSSQPQRS RNSRCGSISS TGRQLERSPV STQSRRQNRR LLRDEIGSSS RTFSSAPERS 
QGEEKSLGDD TLPLAFEQDL ERLKLQLVDI VRTDAFKVGP SSITASKTNR SIAFVRKNKK 
DQIVVIVPPG KVGVVLANRY DGKGTMVSEV RPSSAVHGAI FPGDEIGTLV TVLTIVVANI 
A