Gene PHATRDRAFT_46516 details

Gene Information

• Locus tag: PHATRDRAFT_46516
• ID: 7201672
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 576336
• End bp: 579674
• Gene Length: 3339 bp
• Protein Length: 1051 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180860
• Protein GI: 219120234

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATCGCCCCA CCACTCCGTG AAGACACTGC AAGTTGCACG TCCGACAGTT TTTGGCTAAC 
CATACGTCAA TCACAGCATG GTTCGCAAAC GCTTGGACGA CCGGGTGCGT GCACTGTTGG 
AGCGCTCCGT CGTGACGGGC CAGCGATCCA TGCTGGTCCT GGTCGGCGAT CACGGCAAGG 
ATCAAGTGCC CAATCTGCAC CAAATATTGA CGAAATGTTC CGTACAGGCC CGTCCCAAGG 
TGCTCTGGTG CTACAAAAAG GAACTCGGCT TTTCGACCCA CCGCAAAAAG CGCATGAAGA 
AACTCAAACG CGACAAATCC CGGGGATTGG TGGGTGGGGA AGCCGACCAG GCCGATAACT 
TTGAACTCTT TGTCAGTCAA ACCGACATTA CCTGGTGTTA TTACAAGGAC AGTCACCGCG 
TGCTGGGAAC CACCGTTGGT GTGCTCGTCT TGCAAGACTT TGAAGCCTTG ACACCCAATC 
TCATGGCCCG TACCATCGAA ACCGTGGCCG GCGGTGGCTT GGTCATTTTC TTGCTCCGGA 
CGGTCAAGTC GCTCAAACAG TTGTACGCCA TGAGTATGGA CGTACACGCC CGGTACCGCA 
CAGAGTCCGC TGGTGACCTG GTCCCACGCT TCAACGAGCG ATTCATTTTG AGTTTGGGAA 
AATGTCCCAA CTGCTTGGTG TGTGACGACG AACTCAACGT ACTACCGGTG AGTCGCAAAG 
CACTGAACGA CTTGTCGCCA AACGCCGGTT GGTCCAAGGG TGATGCCGGC GAGGTAATTG 
TGCAGGATAC ACCGGAGCAA CGGGATTTGA AGGAAATTCA AGAAGCACTC CTGGATACAC 
CCCACGTTGG TGTGCTAGTG GAGCTAACGA AAACACTGGA TCAGGCCAAG GCCTTGTTGG 
TGTTTTTGGA AGCCTGTTCG GAAAAGACAC TCAAATCGAC GGTAGCCATG ACGGCCGCTC 
GTGGTCGGGG AAAGTCGGCA GCCATGGGAT TGTGTCTCGC TGGCGCCATT TCGCTGGGAT 
ACTCAACTAT CTGTGTGACC GCCCCGGAAC CGGAAAACTT GGTCAGCGTC TTTGACTTTC 
TATGCCGCGG TCTCAAGGCA CTCAAATATC AAGAACACAT GGACTATAGT GTAACGTACA 
ATTCAGCCAG TGGTCGCGAA CAGACCAAGT GTATCACGGC CATCAATGTA CATCGTAGTC 
ACCGGCAGGT GATCCAATAC GTTGATCCAG CGGAAACGGA CAAGTTTACG AGCGCCGAAA 
TTGTGGCCAT TGACGAAGCT GCAGCAATTC CGTTGCCCGT TGTGCGAGCT CTCATGAGCC 
ACCCAGATCG CTTGACTTTT TTGAGTTCGA CTATTAACGG ATACGAAGGT ACCGGTCGTG 
CTCTTAGTCT CAAACTCATT AAGGAACTGC GGGATGCCAA AGGAGGACGG CACGCCGAGA 
TGCAGGCCGC CTCTTCCGCA GCAAACTCTA TCGTTGGAGC AAAATCGAAA AAGGGCGAGG 
CCAAAGTTCA TGAACAACGG TGGGCCGCAG CAGCGGCTGC AATTCTGGAA GCCAGCGAAG 
GTTCTGATAA GCTGTTTGGG CCATTGAGAG AAATCGAACT GCTGACGCCC ATTCGATATG 
CACACGGCGA TTCAGTCGAA GCATGGCTCA ATAAGCTCCT TTGTTTGGAC TGTGGATCAG 
CGTCTAACTT GAAACTGAAC GGAGGGGCTC CTGCTCCAGG CGATTGTGAA CTTTACAGCG 
TAGATCGTGA CGCTCTTTTT TCTTTCCACA AGTTATCCGA AGCTTTCTTG CAGAAGGTCA 
TGGGACTTTA CACGAGTGCT CATTACAAGA ATTCACCCAA CGATTTGCAG ATGCTCTCTG 
ATGCTCCAGC TCATTCACTT TTTGTACTGC TTTCGCCGTC GGCTGAACAA GATGCAAATT 
CTCTCCCGGA TGTTCTTACC GTTGTTCAAG TGGCCCTAGA AGGACGTATC TCTAGAAAGG 
CTGTCGAAGC GCAGCTTGCC CGAGGACATC GCTCGGCCGG CGATTTGATT CCTTGGACAA 
TTTCTCAGCA ATTTGGTGAC TCTAAATTTG CTCAGTTGAG TGGAGCGCGA ATTGTGCGTG 
TTGCTGTCCA CCCTTCGGTG CAAGGAATGG GATACGGGTC CAGGGCGATC GAACTTCTTT 
ACCGATTCTA CAACGAAGAA ATGGTTTCGC TCGTCAATGA CGAAGGTAAC GATGATGCTG 
ATTCTGACGC AGAGCGCAAT GGAGAAGAAG AAAGCGACAA TGATGAGCCG ACGACATCTG 
GAATTGGAAT TTTGGGTGAA AACTTGAGGC CCCGCAAGGA ACTTCCACCT CTTTTGCTTC 
CTTTGACCGA AGTGGATATG CCGAGACTTG ATTGGGTTGG GACATCGTTT GGGCTAACTC 
TTCAACTTCA CAAATTTTGG AGCCGTAGCG GAATGCGGAT GCTATATTTG AGACAAACCA 
AGAATGAGCT TACGGGTGAA CATTCATCCA TTATGGTCCG TGCTCTACCA AGGCGAAGTG 
GTGTCGATGA CTCTTGGCTT TACGCGTATC TGAGTGATGC TAGGCGACGA TTCACCACTC 
TCTTTAGCGG GCCTTTTCGC CACTTGGACG TTAGGCTTGC TCTTTCCGTG TTCGATAATA 
TGGATGTGCC AAGCAACACC ACCGAAGCTA AGCAACGCGC AGGAGCTTTG GCAGGCACTC 
TTACCTTCAA GGAACTCGAC TACTTCTTGA CACCATATGA CTTGAAGCGC CTTGAATTAT 
ACGGACGAAA TTTATGTGAT CATCACCTTG TAATGGATCT ACTACCAATA ATTGGGCGAT 
TGTACTTCAC TGGGCGTTTT GGATCTGACT TCAACTTATC TAGCGTCCAA GCCGCGCTCT 
TCTGTGGGAT TGGACTACAG AACAAGAGCG TCGACATTTT GACGAGAGAG CTTGGTCTGC 
CAACCAATCA AGTCCTTGCA ATGTTCAATA AAGCAGTGCG AAAAATGTCC ATTGCCTTGA 
ACTCTGTCGT TGAGGAGAAA GAGAAAGAGA GTCTCTTAAC TGGTGAGAAA CGAAGCAGAA 
TTGAAGAAAG TGCCGAACAG ATGCGTCATG TTTCTCGGCA AACTTTGGAT GAAGATGCCG 
AGCAAGCTGG CCAGGAAGCG ATCGCAACGC TCAGGGCGAA CGAGATGGCG AACCATCTAC 
CGGAGCTTGC ACACGATACT GAAATGCTGA AGTACGTCGT CAAGGGATCT GATAAACAGT 
GGGAAAAGGT CCTCCAAGAC AAAGATGTAA GTGGAACAGG CACTGTGCAA ATTTCGGAGG 
TACGAGAAAA GAGAAAAATT GTTGACGATG ACGACATAG 

 

Protein sequence

MVRKRLDDRV RALLERSVVT GQRSMLVLVG DHGKDQVPNL HQILTKCSVQ ARPKVLWCYK 
KELGFSTHRK KRMKKLKRDK SRGLVGGEAD QADNFELFVS QTDITWCYYK DSHRVLGTTV 
GVLVLQDFEA LTPNLMARTI ETVAGGGLVI FLLRTVKSLK QLYAMSMDVH ARYRTESAGD 
LVPRFNERFI LSLGKCPNCL VCDDELNVLP VSRKALNDLS PNAGWSKGDA GEVIVQDTPE 
QRDLKEIQEA LLDTPHVGVL VELTKTLDQA KALLVFLEAC SEKTLKSTVA MTAARGRGKS 
AAMGLCLAGA ISLGYSTICV TAPEPENLVS VFDFLCRGLK ALKYQEHMDY SVTYNSASGR 
EQTKCITAIN VHRSHRQVIQ YVDPAETDKF TSAEIVAIDE AAAIPLPVVR ALMSHPDRLT 
FLSSTINGYE GTGRALRGRH AEMQAASSAA NSIVGAKSKK GEAKVHEQRW AAAAAAILEA 
SEEIELLTPI RYAHGDSVEA WLNKLLCLDC GSASNLKLNG GAPAPGDCEL YSVDRDALFS 
FHKLSEAFLQ KVMGLYTSAH YKNSPNDLQM LSDAPAHSLF VLLSPSAEQD ANSLPDVLTV 
VQVALEGRIS RKAVEAQLAR GHRSAGDLIP WTISQQFGDS KFAQLSGARI VRVAVHPSVQ 
GMGYGSRAIE LLYRFYNEEM VSLVNDEGND DADSDAERNG EEESDNDEPT TSGIGILGEN 
LRPRKELPPL LLPLTEVDMP RLDWVGTSFG LTLQLHKFWS RSGMRMLYLR QTKNELTGEH 
SSIMVRALPR RSGVDDSWLY AYLSDARRRF TTLFSGPFRH LDVRLALSVF DNMDVPSNTT 
EAKQRAGALA GTLTFKELDY FLTPYDLKRL ELYGRNLCDH HLVMDLLPII GRLYFTGRFG 
SDFNLSSVQA ALFCGIGLQN KSVDILTREL GLPTNQVLAM FNKAVRKMSI ALNSVVEEKE 
KESLLTGEKR SRIEESAEQM RHVSRQTLDE DAEQAGQEAI ATLRANEMAN HLPELAHDTE 
MLKYVVKGSD KQWEKVLQDK DKREKLLTMT T