| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46508 |
|---|
| Symbol | |
|---|
| ID | 7201909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 557950 |
|---|
| End bp | 559254 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180854 |
|---|
| Protein GI | 219120221 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0134547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TACCAAGGTA AGTTCATTGA AAAAAACAAG AAAACCATGG TTTCAGTTAG CAAAGTTCCC
ACTCGTTCAG CGAACGGTTC CTCCCGTAGA AACGCTGTGG GAAGTAGTGG ATTGACGGTG
TTCGTCTGCA GGTTGGTGCT GGGCTTGACG GTAGTCGCGC TTGGAGCCTG GTACTACCAA
GTAGCGACTC CGGATAGTTT TGTCACAAGC GGTTTGCATT CGTACACTAT GCCGTTGGTA
GCCTTGGCAA GCTCAGTCAC GGACCTTACG ATTGCGGCAA CTTCGGATAA GAATGCGGCT
CAGATCAAGG CGTGGCGTAA AGCGTTGCAA GATCAATGCA CAAGCGCCCA AACCGCCGAG
CAAGTCCAAG CCGTTGGTGC AGTCAACAAA GGATATTTTT CAGGATTAGG GAGCTCACCC
CCTCTGCAAC CGCGCGGGGA TGCAGCAATA AAGCGATGTC AACGGGTCTT GTTGGATTTT
GGTGCCAACA TTGGGGATAC TTCGGGAAAA CTAATGGACG CTGGATTTGT GGGTTGTGAC
CGCTCCGACG ACCTGAAAAC TCAGCTTGTG CCACCAGCGT ACGATATGGA GACAAAGACT
TGGCAGGAAG CTAGTTTTGG ACGCCGCAAA GTAGCCCGAA ACCCGCTTAC GACACAATTT
GTACAACTTA TGCGTTCCTT TGGGTCGCTT ACCGGCCCTG AGGATTACTG CTACTACGGC
GTCGAAGGCA ACCCTGTTTT CACTAAACAA CTTCAGGCGC ATGAAGACTA TATCATGAAC
TTGAATCCAC GCCCAATTCA ACACATGCAC TTTTTTACGG AATCTGTGGG TGCTGGAACG
GATGGTATGA CAAAACTGTA TCTTGACACA ATCAACACCG AACAAAATTT TTGGGGGAGT
AGTATTTTAC AGGGCCACCA AGACGTACGC AAGAGTGCTG ACGTTTCCAA GGGCGAAAAA
TTGGAGACTG TCGCCGCAGA CGTGATGGGC TACACCATTG GAACACTTTT GCGAAAAACC
ACAAATGCCT TTGCTCCAGA TGCTCAACCA CACGAACAAA GTGGTGGTCA TTTCATTCTC
AAAGTGGACA TCGAGGGTGG CGAATATCCA CTTCTAGACG AGGCCGCCCG CGAAGGAACG
TTGTGTGAGT ACGTCAAAAT GGGCAATCAG GCCGACGTTT ACATTGAGTA CCACAGTCAA
CGCGTAACAG GCCCGAATCC ACTGGTCAAG ACAAAGCTTG AAACCAAAAA AAATCTAGAA
GAGTGCGGCG TAACCTTCCG TGGTCTAGGG GCTTGGTGGG CATAG
|
|---|
| Protein sequence | MVSVSKVPTR SANGSSRRNA VGSSGLTVFV CRLVLGLTVV ALGAWYYQVA TPDSFVTSGL
HSYTMPLVAL ASSVTDLTIA ATSDKNAAQI KAWRKALQDQ CTSAQTAEQV QAVGAVNKGY
FSGLGSSPPL QPRGDAAIKR CQRVLLDFGA NIGDTSGKLM DAGFVGCDRS DDLKTQLVPP
AYDMETKTWQ EASFGRRKVA RNPLTTQFVQ LMRSFGSLTG PEDYCYYGVE GNPVFTKQLQ
AHEDYIMNLN PRPIQHMHFF TESVGAGTDG MTKLYLDTIN TEQNFWGSSI LQGHQDVRKS
ADVSKGEKLE TVAADVMGYT IGTLLRKTTN AFAPDAQPHE QSGGHFILKV DIEGGEYPLL
DEAAREGTLC EYVKMGNQAD VYIEYHSQRV TGPNPLVKTK LETKKNLEEC GVTFRGLGAW
WA
|
|---|
| |