Gene PHATRDRAFT_46490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46490 
Symbol 
ID7201825 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp497973 
End bp499308 
Gene Length1336 bp 
Protein Length268 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180842 
Protein GI219120196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.971686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACGAGAGTG TTTCGTAGTG TCCAGTTTAG CTTCCTCCGT ATCTATCCAC GTAAGTGTAA 
AAGAGTAGAC GAGGTATGAT ACGGCTTGCC TTGCTGCGAG GCATCCAAAT AGAATCGCCC
GAGGATGAGT AAACTGTTAT CCCTGTCTGA ATCGATGATT GACAAACGCA TTCAAGTAAC
TTTTCATTTT TGGCTGAGGG CATTATTCGG AGCAAGCTCT TTTTATTACT TTTGATACCA
TCGGATTTCT GAACTCAACC GTTTCCCATC TATCACCTTG TTTTCTTTTC ACAGCCAGAT
TGCGTGCGAA CGATGAGTTT GATTCACCAA GCACCCGTGG TCGTACAAGG GCGCCGACCG
GGCCTATACC TGGGCGGCAA GGCTGACGCC AAAGACCGCG ACAAGCTCGA GCGCTACAAT
GTAACACATA TTTTGAATAT GACGACGAGC AAGGAAGTTA ATATTAAGGT GAGTTGGAGG
AATGGGACAG TTTTTGTCGT ACGATGATCA TCTTTTGAGA ACGCAACTGA CCTTGATGAT
GTTGTTTGTT GCACGAGATT GTTGCAGGCT GGGGTTCCTA ATTTCTTCGA ATCCTCCGGA
CGCTTTGTGT ACAAGCGCAT CGCCGTACTG GACGCGCCTA CCAGTGTATC CGATTTGGCG
GAGCGGTCGG ACGAAATTGT GGGCTTCATC GCCAAAGGAC TGCATCACGG AAGCGTGCTC
GTTCATTGCC AACGTGGCGT TTCTCGATCG ACCACCGCGG TACTGCTCTA TCTCATGAGG
TACGTTTCTG TTAACGTTTG CCAATTGTCG TCGGAGCTGT TTGTCTGCTT TCTTGGTTTC
TCACGACTAC CTAGTGCTTG AATATTCCGT AGACGCCTAG GTATGCCTCT CTCGCAAGCT
TTGACGTTGG TGCAACGTCG ACGGCCACAA GCGGCACCGA TACCGGCATT CGTTACCTTT
CTGGAAGAGT ACGAAGTGGG ATTACGCGAA ACAGGGGTAG TTTCGAGTAC GTCAAGCGGT
GCGAAGCGTC CAGCTGGGGC GGCTCAGCCC AGTGGCCCGA CCGCAAAAAG GCCTTTGGTA
GGTCCGGTAT TTCGCTGTAG CCGTGACGAT GTTGTGCACG AGGCAGAAAT GGACCAGCGG
TCGATGGATC CAGAAACAGG GTCGAGCCAC AAAGCAGAGA AACTGGATGG TACTGGAGAG
GAAATCACCG GCAAGATGGT GGGGCCGATC GGCCGTCCAG CATCCGCTAA TGATGCTCTG
AAGGAATACG TTCCGCGGCG CATTGGTCCA ACGATGCCGC CTGAACTGTA ACTTTTTACT
GTTAGTTCTG TCCCCG
 
Protein sequence
MSLIHQAPVV VQGRRPGLYL GGKADAKDRD KLERYNVTHI LNMTTSKEVN IKAGVPNFFE 
SSGRFVYKRI AVLDAPTSVS DLAERSDEIV GFIAKGLHHG SVLVHCQRGV SRSTTAVLLY
LMRRLGMPLS QALTLVQRRR PQAAPIPAFV TFLEEYEVGL RETGVVSSTS SGAKRPAGAA
QPSGPTAKRP LVGPVFRCSR DDVVHEAEMD QRSMDPETGS SHKAEKLDGT GEEITGKMVG
PIGRPASAND ALKEYVPRRI GPTMPPEL