Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46490 |
Symbol | |
ID | 7201825 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 497973 |
End bp | 499308 |
Gene Length | 1336 bp |
Protein Length | 268 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180842 |
Protein GI | 219120196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.971686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TACGAGAGTG TTTCGTAGTG TCCAGTTTAG CTTCCTCCGT ATCTATCCAC GTAAGTGTAA AAGAGTAGAC GAGGTATGAT ACGGCTTGCC TTGCTGCGAG GCATCCAAAT AGAATCGCCC GAGGATGAGT AAACTGTTAT CCCTGTCTGA ATCGATGATT GACAAACGCA TTCAAGTAAC TTTTCATTTT TGGCTGAGGG CATTATTCGG AGCAAGCTCT TTTTATTACT TTTGATACCA TCGGATTTCT GAACTCAACC GTTTCCCATC TATCACCTTG TTTTCTTTTC ACAGCCAGAT TGCGTGCGAA CGATGAGTTT GATTCACCAA GCACCCGTGG TCGTACAAGG GCGCCGACCG GGCCTATACC TGGGCGGCAA GGCTGACGCC AAAGACCGCG ACAAGCTCGA GCGCTACAAT GTAACACATA TTTTGAATAT GACGACGAGC AAGGAAGTTA ATATTAAGGT GAGTTGGAGG AATGGGACAG TTTTTGTCGT ACGATGATCA TCTTTTGAGA ACGCAACTGA CCTTGATGAT GTTGTTTGTT GCACGAGATT GTTGCAGGCT GGGGTTCCTA ATTTCTTCGA ATCCTCCGGA CGCTTTGTGT ACAAGCGCAT CGCCGTACTG GACGCGCCTA CCAGTGTATC CGATTTGGCG GAGCGGTCGG ACGAAATTGT GGGCTTCATC GCCAAAGGAC TGCATCACGG AAGCGTGCTC GTTCATTGCC AACGTGGCGT TTCTCGATCG ACCACCGCGG TACTGCTCTA TCTCATGAGG TACGTTTCTG TTAACGTTTG CCAATTGTCG TCGGAGCTGT TTGTCTGCTT TCTTGGTTTC TCACGACTAC CTAGTGCTTG AATATTCCGT AGACGCCTAG GTATGCCTCT CTCGCAAGCT TTGACGTTGG TGCAACGTCG ACGGCCACAA GCGGCACCGA TACCGGCATT CGTTACCTTT CTGGAAGAGT ACGAAGTGGG ATTACGCGAA ACAGGGGTAG TTTCGAGTAC GTCAAGCGGT GCGAAGCGTC CAGCTGGGGC GGCTCAGCCC AGTGGCCCGA CCGCAAAAAG GCCTTTGGTA GGTCCGGTAT TTCGCTGTAG CCGTGACGAT GTTGTGCACG AGGCAGAAAT GGACCAGCGG TCGATGGATC CAGAAACAGG GTCGAGCCAC AAAGCAGAGA AACTGGATGG TACTGGAGAG GAAATCACCG GCAAGATGGT GGGGCCGATC GGCCGTCCAG CATCCGCTAA TGATGCTCTG AAGGAATACG TTCCGCGGCG CATTGGTCCA ACGATGCCGC CTGAACTGTA ACTTTTTACT GTTAGTTCTG TCCCCG
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Protein sequence | MSLIHQAPVV VQGRRPGLYL GGKADAKDRD KLERYNVTHI LNMTTSKEVN IKAGVPNFFE SSGRFVYKRI AVLDAPTSVS DLAERSDEIV GFIAKGLHHG SVLVHCQRGV SRSTTAVLLY LMRRLGMPLS QALTLVQRRR PQAAPIPAFV TFLEEYEVGL RETGVVSSTS SGAKRPAGAA QPSGPTAKRP LVGPVFRCSR DDVVHEAEMD QRSMDPETGS SHKAEKLDGT GEEITGKMVG PIGRPASAND ALKEYVPRRI GPTMPPEL
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