Gene PHATRDRAFT_46476 details

Gene Information

• Locus tag: PHATRDRAFT_46476
• ID: 7201567
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 448487
• End bp: 455394
• Gene Length: 6908 bp
• Protein Length: 2069 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002180832
• Protein GI: 219120175

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0711303
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGAAC GAACACTCAA CACCCCATTA TCCGAGCGAA TACTTGGGCG TCATTCTTCC 
TCCACGTTCA ACCGAACGCC AGTCGCTACA ACAACGGCGA CGACGCCCGC TACCAACAGC 
AATCCGACAA CAGGCATCGT TATGAGACCA ACAGAAGCGC AGCTACGTTG GGCGCAGTTC 
CATCACAAGC GGCAGGCGGA GCAGGTACGA ATTCGGACGC AACAGCTGTG GCAGAGGCCG 
GAAACCGTTT CGGATGTGTC CGACGCTCTC CCAGAGGACG GCGCCAGCAG CACCAGTGAC 
AGTGGTGTGC ACATGGTCGA TAACGACAGA ACGTTGGGGA TAGAAGCGCC AGTGTCTTGC 
CGTGAAGCAC AGAAACCATG TATCTCTAGG GGGCGTCGAG CTTTGCTTCG CGTATCCCGT 
CGACGCTGGC GAGAACGAAA AAATCGTATT TTGAAAGAGG GTTTCCGCTC GGGTATCAAC 
GATAATGACG AAGACGATGA CCAAGCGAGC GAAAGTTCGA ATGACGCATT GGCGTCGATT 
TTTGCGGAAA GGTCTGTTTG GCATAAATCT CGTAAACGTC GCCGCCGCCG TCGACAATCT 
ACTGCCCAAA AGGCGCCGCA TGATTCGGGA CGATCGCGAC GTTTCGAAGA AGCCTTCAAC 
GCCATGATGC GAAATCTCGC CGCACTCCGA CCAGACGAAT CATATCATGA CATCGTGACA 
CCAGAAAGGG TTTGGACACG TCCCGAACAC CTACCACAGA TGGAAACCAT TGATGGACGT 
GATTATACTG ACTTGAAGTG GGGTATTATC AAATCTTTGC CAAAGCCAAA TCCTAATCGG 
AATTCCTCGG CAACCTCACA CCACCCGTTG GATCGCGGAG CCTCGTGGTT GGTGCATATG 
CCATCAAGCA TTAGCAAACG TGACTCATAC GCCTCCCGCT TTGCCTCCAC TCCGTTCATT 
TCCAAATCCA CTTGGAAGAA CACGTCTCCC GAGCACAGTG ACGAAGAATG TCTCGGTGAG 
GAAGATCGAC GTTCACAAAT TTCGGATAGC TTACAACAGA TTTTGCGATC GCCGATGCAA 
GGAAAGCTCA GCAGTATAGT CGCTGTCTTA CAACAGAAAT TGGTAAATAC GGCTACTTCC 
GAGCAGACAG CTCGGCCACG GACACCACCC ACTATGAAAT TGTCCCCATA CTTGACAGTG 
TCAACGCAAA CTGTTGGGGA TGCTAGTGAT TATCCCAAAG GGGCCGGTAG TGGGGGGCCG 
AAAAGCTTGG ATGTCGACTT CGCCCACGTT GAGCTTGGAG CTGATCATGT TACAGATCAG 
AAACGTATGC AAGGATTCCA GCAGCTGGCA AATCCGCCAC CGTCGTCACC CTCCCGCAAA 
ACAATTGAAG CCATTCTACA AACGCTCGAT CCATATCTGA AGGAAGAATT AGAATCTCAA 
GAAGTGGGCA CTTGCGAGCA TTTGTTGTCA CGATTTTTGG ACGAGGTAGG ATTTGATCCG 
GACATCGACG ACGTTGGCGA AATGGAGAAG ACCAAAGCAT ATTTGGAAAT TTTCGCTCGG 
CGATTTTTGG TGCAAGCGCG TAGCTTTCCA AAGGAGCCGC AACAAAGCTC TACAAAAGTT 
CAACGTAGTG GCGGATTAGT GCAACGGTTG GTTTCTCTAA TGGAGCAAGA CCTGGCTTTG 
AATAGGAATA CTGGATTGAT TTCAGCTGAC GGTAAGTTGC ACAAGCCGAC CTTTGCGCGA 
CTTATGCTCA AATACCTGGA GCAAATATAC AGTCCTTCTC CGACAGCTTC CTTTCGACCA 
ACGATGACTC GACAGCGACG TTCCGCGAGA GAAACTTTGT TGACTGCGGT GACGGATACT 
GCCTACGATT GTACGAGTGA CTTAGCGCTT GTACCAAGCA AGAACGCTAC GGCAATTGTA 
GAGCGCCTGA TAAAGCAGAT TGAGATAGAC GCTTCTAATA TTGGATGATG ATACGAACGA 
CAAGTCAGTT TTACCCAAGG ACGGAATTTT TGATACGTTT GCATTTGAGC ACATTGTGAC 
ACGTTATCTT GCTGAAGCGA CTGGGACCCC CGAAGAAGTA GTCTTGGGAG CGCAGGACCT 
TCAATCTTTG TCGCAGAGGG TACCAATTTT CCCGAAAGCT TCTGCTAACC TCGTCGAACG 
CATGGTTGCC GCCTTTGAAG GAATCGATAT AAACGAAAAA CTGACGTCTG ATGATGGTAA 
GCTCAACACG GCATTCTTTG AAAGTATGAT GAGAAAACTT TTGTCAAACG AAGTGTCAAA 
GTTAAGCAAA GGACGACGGA ACGCTGCTTT AGACACTGCC TTTTCTCTAA AGATAAGTGG 
GAACTATTCG CAGACTGGGC ATGATAGTCA GCCGAAGGAA ATGGACGTAT CAGGAAAGTA 
CACTCTCCCT TCCGTAGAGG CAAGGCTAAG CTCTATGACA ATTAAGCGTT CTAACGGGCA 
TATTGATAAG TTGGTCTTAC GGGCTATGAT AGCCCGGTAC TTATCAGCAG TATGCAACTT 
GCCGGAGAAT GTTGTTCTTG AAGCAGAAAG TGTACATACG GAGATGGACA GAGAATTTTC 
GGTGATCGAT AATTCCAAAA ATAAGGAAGC GGGATCATCA ATGATATCAA ATGACTTCGC 
AAAACGCTTA GTCGATCAAA TTAAACAGTC CTCAGAAGCT GAGCAACTTG TTTTGGCTAA 
TGGAGATCTC AACAAGGCAG TATTCGAAAT GCTCATGGCC AGATACCTGG GTCAGTGTAT 
TCGGAGGGAG CCTGAATTCT TTTGCGCTGC CGAAAGCCCT CTAGCGCTGG CCGAGGCGCG 
AAGGCATGCT GGGACGCGTA AATATCGTCA GAGAGAGGGC GAGTCAGAAG GTGGCAACCA 
CGGTATTCCA ATGACGTCGT GTATCACCCA AAGTGTTATC GTCGCCATAG AACGAGAATT 
GGAGACAACG CCTATCGTTA CTGCTCAAGG CAAGGTCGAC TTTGCGACGC TTGAAATTTT 
ACTGGCACCG ACTTTATCGA GGGCCTTGGC AAGTAACGCT GGTGTCACAG AGAGGCGACA 
TTTTCTAAGT TGGCTCGACA GTGGCACTTT CGTTAAGAAT ATTGTGCAGG TGATTAGCAA 
TTTGTCGAAC GAAGTTGATC TGACTGAAAT TAACGACGTC CGCACACACG AGTTGCTACG 
GACTACACTT GTCGAGCTGT ACCAAGAAAA TCATCCTAAG AATACTTCGG CATACCGAAA 
TGTTGTAACG CACGAGGCTA CAGGTGTTGC CATTGAAAAG CATGCCCATG AGGTTGCACA 
TGATATATCA AAATACCTCT TGAATGCAGG TGGGAACCAA ATGATGACTA ATAGCGCTGG 
CAAACTTGAT GTACCAGTAT ACGAAGCTTT GCTCTGGCGT TTTATTGAAG AGCAAGAGTC 
GATAGGAATG GGTATCAACA CAGATAATAG CACACCCACC ATTATTCTCC CAATAAAGTC 
GGAAAGTCTG GACGAAACAT CTCCAAAGAC TGAATCAACA ACAGAGGACC CTGTGCGGAC 
AGAACATATT GGCACTCGCT ATGGTGGCTC CCATCCTATT GTTAGAGGAA ATGTGGTTTC 
TGAGCTTATC CATGATCTAC CTACGATTCA GAAAGAGATT AAGTCAAATG ATACCTATCC 
CGATGATTTT GACCTACTGA AGAGCTCTGC CAATAGTGGA GTAGGCCAAT TCCTGCAGAG 
TTTGAGCAAG CGAGTAGGCG AGGACACTGC TAAGTCTAGA CAACACAAAA TTGGTGCGGT 
TGCAGCATTT CGAAAAACGC GCGAGCAGCG CGTCGCTGAA GATGACAAAT CTTCGAAATC 
CACGTTCCGT ATCCTGCCCG ATGGAATCAA GCGAGTTGTT CAGAAGTTCC GAGGTGCTTC 
TGATTTGCCG CAACTATACA TCGACGGCGA TGCGGGAGGT AAACCGACCG AATCAGCATC 
TATGGACGCG GCTTCCTTGT CAGCTCACAG TCGAGCATCT GACGAACGGT CCGGTGTGTC 
TCAATTTCTT TCTGAAAATG TGAAAAATCT GACGTCTGCT TTGATTTTCG ATCGGGAAGC 
CGGAGGATCA GTTATCGATA CCGACGATGC GAGTACTCAA GCCAGCGATA TCGGCAATGA 
TTCAAAGGCG ATTGCAAATC TGCTACTGTC CCCGACTCTT TTGACCAAAC GACACCAACA 
AGCTATTCGT GCGATTGAGA ATCGGACTTG GGAGCAGGTC GAGTATCTCC TGAGTGCAAA 
TCCCTGGTTG GCGGAAATGA CTGATTTGAA AACAAACCAG TGCCTTCTTC ACAAACTGGC 
ACTTTTTGGT GCCGGAGAAG GTCGCATCAA TAAGACAACA GGGGAGATGG TTGTGATTCG 
GTACCCGAGT GCTCCGGAAG TCCTCAACGT TGATCTTGTA GAATTGTTTC CATCCTCAGT 
GCACAAATTT GATGTGGATG GAAATCTTCC ACTTCACATG GCTGCAGCTT CAGCAAATAT 
TGCCATGATA AACCTACTTG GAGATAGATT CCCCAGTGGT GCATCCGTCA GAAACGAGGA 
TGGGATGTTG CCTCTTCATC TTGCGATCCA GGCATGTGCC TCGGAAACAG GAGCCGCCAA 
CAACGGACGA ATCTCTTCGC TAGAAATCGT CAGGGCAGTC CTCGACTACT TTCCTGCAGC 
TGTTACAGTC GCGGATAACG AAGGGAATTT ACCTATTCAC ACTGCTGCTA GAGTTATGTG 
CGGGCACAAC GGAGCGCGCA TCGTGCATTT ACTTTTCGAA GAGGCGGAGC GGCGATCCCT 
TAACCCTTCT TCTGCGGCGC CTTTCCGCAA TAAAGCACAA GAAAAGAGGA CAGAGATGAA 
CCCGCCTGAA AGCGAAACTT CGACTCTGTC GGCAACTGAT GCGTCCCACA ATTTCGACAT 
TGTTGTGCAT TGTAACCTTG TTCGCAACGA AAATGGCGAA GTGCCACTGC TTGTTGCTGT 
CAGGGCTGGC GCAGGATGGG AGGTACTTGA ATCTTTGGTT TATGGCCCTG GAGGTGACGA 
CGCGGCACAG CAGCAGGACG ATGATGGTAA TACGTGCCTG CATTATCTAG TGGGGTCTCG 
ATTTATGGAC TCAGCAGGAG CACTATCTAT GCTAAAAGTT GCTCCGGACG CTGCATCTGT 
CACTAATCGA AATGGCTTGC TTCCAATTCA GGTGAGTCTC CCCTTTTAAA TCTTGCCGCT 
GCTCTTTACA TTCTGACTTG TGTTTTTACC TGATAGCTGG CATGCCAGGA GATGGTTCCG 
GAAGAAGTTA TTTTAGCTCT AGCGTTAGTA GATCTACCAT TTGAATTGAC CAACAATCAG 
TCGGCTGAAA CCAGATCCGG TCGAAGCTGG TGGTTCCTGA CTTGTGAACT TGACGATCGC 
TACGTAAACG TGGTTGAAAG AGTTGTTCAA ATATGTTCTT ACCCTCAAAT TCGACAGTTG 
TGCTTTTTGG AACAACAAGA ACTCGAGGGC CCACTAATCT CTAACGCCAC GTAAGTTACA 
GACGATCTGC GGTCGCTTAA GAAATGCACA CTCATGACGC TTTTTTACAG GCCCCTGTGT 
CGTCAAGTTC TTTTAAGATC TCTGCGCTTT CTTGGGCGCT TCGAGTTTCG TGGAGAATCC 
TCTGTTTTTT CGGACACATC ACAAGCACTA TCTGTTTTCG ATGCAGTTGA TTTCGGACAT 
GGTGTAGACT CCATTGAAGG CGGTCGACCG GTCTTTCTGC ACTGCTTTTC TCATGAGTCG 
GCTTTTCTGT CGAAGGTGCG AGAGGTGACA AAAGTGTTAC TTTTATTTTT GATGTCCCTA 
ACTGACAACA TTTCTTTTAC ATCCTCCAGA TCTCTAATGT GGAGACCTTG AATCTAGACT 
TTTCGTTATT GGAAAAAATT GATGTCTTTT TCGTCGGTGA AAATGGCGAG GAAACACTTA 
CCGGAGATGT GATTCAGTAC TGCATTTCTA TCGAGCGGCC AAGCCTTTCT CTGGGCGAAG 
TTATCGCAGG TATGCTTGAA AACGATCACT GCCAAAAGGA TGACAGAGTA AGAGAGCGGT 
ACGCAAACAA AGTTTTTTCT GTGTTGCGAA TCATGGCAAA GGCGTTGTAC CATCTTCATT 
CCGTCGGGTT AGTACATGGA GATGTCTCTA TTGACAAATG CGCCAAATAC GGCGACAGCT 
GGAAGCTTGC TGACACCCTT GGAGTTCAAC TAATCGGTCA CCAATTTTTG CCCTCCCGTT 
TTTCTTCGGT TAGCCCGCCG GAAGCAATAA AGCAATCGGG TACACAACCG GACGACTGCG 
TCACTTTCGA TACCGATTTA CTCGCACATC CATCGATAGA TACCTGGGGG CTAGGAAAGT 
TGGCATTCGA GGCGCTTGTA GGAGAAACGA TGGTCAGTGT TGCAACACCG AGGCTTGATG 
GAATGGACGA GGGAGCTCTG ATTCGTATCC TTAATTGGAG TGACAGCGAT CTTCAATCAG 
TGCGTGAAAA GCTAAGTGCC TCTGCAGTGC TTAAGGAAGG AATCGAGATG ATTCTTCATT 
GCTTATCGCA CGATCCCCTA GATCGCCCTA CAATGGATGG AGTACTCAGC CATACAGTGT 
GGAAAATACT CCGCCTCAGC AAAAGGCAGC AAATGGTCAA TGAATGTTAG TTATTTGCGG 
ACAGTAATTA CTAGTCAACT TTCTCTCACT CGCGATGACA ACCTGAATCT ACAGATGTTT 
TAATCATACC TCTAGCACGC TATTCCAATG GTCAAAAGAT ACTGCCGAAG TCCTTCAAAT 
CGATGATCGC CTTCATGACA ATGAATTACA ACAACAACCT GAGTCATCAG CTCTGCAACC 
GCGAGATCCC ACATGTCTTT CTCCCTTGCC TCGCGGAGAA CTTGAGCACA TTCGTCAGTC 
AATTTCGG 

 

Protein sequence

MRERTLNTPL SERILGRHSS STFNRTPVAT TTATTPATNS NPTTGIVMRP TEAQLRWAQF 
HHKRQAEQVR IRTQQLWQRP ETVSDVSDAL PEDGASSTSD SGVHMVDNDR TLGIEAPVSC 
REAQKPCISR GRRALLRVSR RRWRERKNRI LKEGFRSGIN DNDEDDDQAS ESSNDALASI 
FAERSVWHKS RKRRRRRRQS TAQKAPHDSG RSRRFEEAFN AMMRNLAALR PDESYHDIVT 
PERVWTRPEH LPQMETIDGR DYTDLKWGII KSLPKPNPNR NSSATSHHPL DRGASWLVHM 
PSSISKRDSY ASRFASTPFI SKSTWKNTSP EHSDEECLGE EDRRSQISDS LQQILRSPMQ 
GKLSSIVAVL QQKLVNTATS EQTARPRTPP TMKLSPYLTV STQTVGDASD YPKGAGSGGP 
KSLDVDFAHV ELGADHVTDQ KRMQGFQQLA NPPPSSPSRK TIEAILQTLD PYLKEELESQ 
EVGTCEHLLS RFLDEVGFDP DIDDVGEMEK TKAYLEIFAR RFLVQARSFP KEPQQSSTKV 
QRSGGLVQRL VSLMEQDLAL NRNTGLISAD GKLHKPTFAR LMLKYLEQIY SPSPTASFRP 
TMTRQRRSAR ETLLTAVTDT AYDFLPKDGI FDTFAFEHIV TRYLAEATGT PEEVVLGAQD 
LQSLSQRVPI FPKASANLVE RMVAAFEGID INEKLTSDDG KLNTAFFESM MRKLLSNEVS 
KLSKGRRNAA LDTAFSLKIS GNYSQTGHDS QPKEMDVSGK YTLPSVEARL SSMTIKRSNG 
HIDKLVLRAM IARYLSAVCN LPENVVLEAE SVHTEMDREF SVIDNSKNKE AGSSMISNDF 
AKRLVDQIKQ SSEAEQLVLA NGDLNKAVFE MLMARYLGQC IRREPEFFCA AESPLALAEA 
RRHAGTRKYR QREGESEGGN HGIPMTSCIT QSVIVAIERE LETTPIVTAQ GKVDFATLEI 
LLAPTLSRAL ASNAGVTERR HFLSWLDSGT FVKNIVQVIS NLSNEVDLTE INDVRTHELL 
RTTLVELYQE NHPKNTSAYR NVVTHEATGV AIEKHAHEVA HDISKYLLNA GGNQMMTNSA 
GKLDVPVYEA LLWRFIEEQE SIGMGINTDN STPTIILPIK SESLDETSPK TESTTEDPVR 
TEHIGTRYGG SHPIVRGNVV SELIHDLPTI QKEIKSNDTY PDDFDLLKSS ANSGVGQFLQ 
SLSKRVGEDT AKSRQHKIGA VAAFRKTREQ RVAEDDKSSK STFRILPDGI KRVVQKFRGA 
SDLPQLYIDG DAGGKPTESA SMDAASLSAH SRASDERSGV SQFLSENVKN LTSALIFDRE 
AGGSVIDTDD ASTQASDIGN DSKAIANLLL SPTLLTKRHQ QAIRAIENRT WEQVEYLLSA 
NPWLAEMTDL KTNQCLLHKL ALFGAGEGRI NKTTGEMVVI RYPSAPEVLN VDLVELFPSS 
VHKFDVDGNL PLHMAAASAN IAMINLLGDR FPSGASVRNE DGMLPLHLAI QACASETGAA 
NNGRISSLEI VRAVLDYFPA AVTVADNEGN LPIHTAARVM CGHNGARIVH LLFEEAERRS 
LNPSSAAPFR NKAQEKRTEM NPPESETSTL SATDASHNFD IVVHCNLVRN ENGEVPLLVA 
VRAGAGWEVL ESLVYGPGGD DAAQQQDDDG NTCLHYLVGS RFMDSAGALS MLKVAPDAAS 
VTNRNGLLPI QLACQEMVPE EVILALALVD LPFELTNNQS AETRSGRSWW FLTCELDDRY 
VNVVERVVQI CSYPQIRQLC FLEQQELEGP LISNATPLCR QVLLRSLRFL GRFEFRGESS 
VFSDTSQALS VFDAVDFGHG VDSIEGGRPV FLHCFSHESA FLSKISNVET LNLDFSLLEK 
IDVFFVGENG EETLTGDVIQ YCISIERPSL SLGEVIAVHG DVSIDKCAKY GDSWKLADTL 
GVQLIGHQFL PSRFSSVSPP EAIKQSGTQP DDCVTFDTDL LAHPSIDTWG LGKLAFEALV 
GETMVSVATP RLDGMDEGAL IRILNWSDSD LQSVREKLSA SAVLKEGIEM ILHCLSHDPL 
DRPTMDGVLS HTVWKILRLS KRQQMVNEC