Gene PHATRDRAFT_46444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46444 
Symbol 
ID7201798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp357194 
End bp358200 
Gene Length1007 bp 
Protein Length235 aa 
Translation table 
GC content47% 
IMG OID 
Productelectron carrier protein 
Protein accessionXP_002180810 
Protein GI219120129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAAAGTTGG GTCGAACAGA GCAGACAGAG ATCTATTGAC TGTCACGATC TCGTACAACG 
GCTCTCACAT CCTCTTCTGC TTGAATATTT GGCGCTAGGT TCCGTCCCAC GAGCTCTCTT
GACAAGCGAA GCTAGCCGAT TAGTTTGCAC TTGCAATTGG AATTATTTGC TCTCAACCAC
AATGAATGCA CGTCGTACAC TCGCTTTTAC TTTAGCCTTG CTCTTCGACG CTTCGGCAGT
TGGAGCGTTT ACATCTCTCT TGACAACCTT CAAAACGAGC CGTATCTCTA TCACTTATTT
GCCGGCCACA GTCAAACCTG CGCCAAAAAA CAAGGGATAC GAACCCAAAT GGAAGAAGAA
GGAGACTTTG GCCGACCAAA ATGGGGGCAT CAAAGATTTC AAGCAAATCG GGCTCAAGGG
AAACGTCCCG GTTATATTCA AGCAAGGCAA CGAGACCCGC GCGACCGTCG CCTTGGCAGG
GCAGCCACTT CGCGATGTCG CGACCCAAGC CGATCAATTT ATCAAGTACG GATGTGGCAA
AGGGGAATGC GGCACCTGCG AATGCCTCGT CAATGGACAA TGGATTCGAC CTTGTCAAAC
CAATGTACCC GGAAATTTGG CCCCGGGTGA AGAGTACGTT GTTCAGGTGA AGGAAGTCAA
GAACAAGGCA GTTAGCTCCG GAAAGTTTTA TTCTTTTCGA TCTTTTATCA TGGGATTCTA
CAATAATTTG CTCGGCATGG TTGGGTTCGT CAAATACCGT CGAGCAGCTA AGAAGAATTG
GCTAGAGCGA CAAGAGTACG AGGACTTGAT TCGGCAAAAG ACAATGCAAA AGAAGATAGC
GAGAGAAAGA TCTGTCGAGG AGGACAAAAA CAACAAATTG TCTCCTTGAC CTCATCTTCA
CTGATGCCAC TAGGTTGTCA AGTGTTCATA AATACTGCAC CGAAGTATAG TATCCATGGC
AATAGCTAGG GAATGTTGAA AAATATTTTA CAAGCCTTTT CAGTCTG
 
Protein sequence
MNARRTLAFT LALLFDASAV GAFTSLLTTF KTSRISITYL PATVKPAPKN KGYEPKWKKK 
ETLADQNGGI KDFKQIGLKG NVPVIFKQGN ETRATVALAG QPLRDVATQA DQFIKYGCGK
GECGTCECLV NGQWIRPCQT NVPGNLAPGE EYVVQVKEVK NKAVSSGKFY SFRSFIMGFY
NNLLGMVGFV KYRRAAKKNW LERQEYEDLI RQKTMQKKIA RERSVEEDKN NKLSP