Gene PHATRDRAFT_46434 details

Gene Information

• Locus tag: PHATRDRAFT_46434
• ID: 7201538
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 326808
• End bp: 329098
• Gene Length: 2291 bp
• Protein Length: 631 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002180803
• Protein GI: 219120115

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAATCACTTC CACTGAAAGC AAGGCGTTGC GCCTGTACGT CAGACCTTTC CGGAACAGCC 
TATTGGGAGG ATTCTAGCGA TTGTTGCTCG AGTCCTCTGT TGTTCGTATT CCTACATGTT 
TCCTTGCTTT GCAAGATTCC CGTTGGTGAA TTCTGTGTAT TTGTTGGTGT CCCGAAAAAA 
GAGACTCGGT CGGTAATCGT TGTGCTGGTG TAGATCCTTT GTTTCCCACC CGTCATGACC 
CTACTGGGCA CGACTGCCAC TGAGCCTTCC CGCTCGGTGG CACGACCTTT GGCCAACCTA 
GGGAATACCT GTTATATGAA TTGTGTACTG CAATCGTTAG CCCATTGTCC GGAACTTTGT 
TTGGCTATGG ATACGCAGCC ACACCGTTTG ACTTGCCCCG TAGCCACCGA AAACGCCATC 
CTTTCGCGAT CTGCTTCGCC GTCGTCGTCG CCCGACGACA GTCTCACGGG CAACAAAGAA 
CCGCGCAAGA CGGCAACGCG GAAATCGCGG CGTTCCGGCC GCAAGACGCC CCCCGACGAC 
GAAGACACGG CTTCGTCCTC GGGTTGGCAG TTTTGTGCGC TCTGTGAAGT CGAAAAGCAC 
CTACAGAGCG TGCACGATTC CGTGCACAAG GACAAGCCCG TGGCACCGTC CACCTTTGTC 
GAAGGCTTTA TCGAGCACGT GGCGCCGTGG TTCAAGTTGG GGGTGCAAGA AGACTCGCAC 
GAATTTCTCC GTCTCTTGAT TGACGCTATG CAAACCTCCT GCCAACAAGC TCGAGCCCTA 
CCCCATGCGG ATATTTCCCG AGACGGCAGT CCACAAGGAA TCAAGCCGGA CCACAGGAAT 
CAAGACTATG AGTATCCCTT CTCTCTCTTT CGTGGCACCG TCCAGTCCAA CGTAACTTGC 
AGCTCTTGCC AGGCTTCCAG CTCGACATTG GATCCCATTG AAGATATAGG TCTCGAAGTT 
ACGCTCCCTT CTCACGTCTC GCCAGGTGCC AACGATCGAT CTTCGCGCAA CAGCTCTCCC 
GTCCCGGCTC CAGCGCTGGC GGACGTGCAA GCCGCCTTTC AACGATTTGC GCGGGCCGAA 
GCCTTGGATT CGGGCTACAA ATGCGAGAAG TGTGGCAAGG TTGGCCGCGC CACCAAGCAA 
TCTTGCCTGT CGTCCATCCC GCCCATTTTA ACACTCCACC TCAAGCGCTT CCGATACGGC 
GACTCCCGTA CGACCAGTAC TGCAGCAGCC GGCACCACTG GTCGTCGGAC TGGCCGATCC 
GAAATTAATC AACTCCTCGG CAGCAACGCC GATTTCCTCG CCGGCAAGTC TGGCTCCGCC 
AAGATTGAAG GACACGTCAA GTTTGATCTC TTCTTCGACC TCAAGCCGTA CTTGACCGCT 
GAACTTAAGA AACAGCACTC CAATATGTTT TGTCGTCTGT TTGCCGTGAT TGTGCACGCG 
GGCAAGAACT CGCACTCGGG TCACTACATT GCCTACGTCC GTAGTCTGGC CCGCAACGAA 
TGGTGGAAAA TGGACGACGG CCGTGTGACG GCAGCTAGTG AGCAAGAAGT GTTAATGGCG 
GAAGCCTACA TGCTCTTTTA TCGCGTCGTC CAACACCCGA TTGCGGTGCA ATTGGAAGAA 
AAATGCAAGG CCAAGTTTCA AAATCGTCAC GAGCGAGAGC ACGTCCAGGC TTCGATCGCC 
GCGACCTCCA TTGAACCGGA ACAATCCAGC ATACGAGGCT CGAGTCGCAA GCGTGCCGCT 
CCCGCGTTTG AGGACGGTGA GGAATGGGCG CGGGCCAAGA CGAGCATCCC TCCGCGCCTG 
CTAGGTTTGA TTCGCAAGGC ACAAGAAATG GTGGCGGACG ACATCCAACT TTCTCCGGAC 
TATTTCAAGA TGATCTCGGA AGAAGCTGCC AAGGAGAATG CCGCAATCGG CAAAGGCCCG 
AGCAAGAGCA TCTGCGGTAA GTTCACTTTC CCAGGTTTCT GGGCCGCGGA CGCCGTCTAC 
TTTATTCTCA ACACCTCGTT TCCCCATGCA GAGGACGATG TACTGGGCGG AGCCGAATCT 
TTTCGTCGTA AATTGTGCGA CCTCTTTTAC AAGCTAGCCA AGCACTTTGA TGGCGATGGC 
AGTGGGAACG GTACTTCCTG GCTCTGTCGG GACAAGTCTG ACCGGGCCAA CGATGACGCG 
AAACGGGTTG CCGTGGTGGA GCCCGAAGAC GTTGATTTGC TTTGAGAATG AAAATTTCGA 
AAATACCCTC ACCAGAATAA TGAAATCAAA ATAGACACAA AGAAACAAAT AAATATAACT 
GTGTACAAAA C 

 

Protein sequence

MTLLGTTATE PSRSVARPLA NLGNTCYMNC VLQSLAHCPE LCLAMDTQPH RLTCPVATEN 
AILSRSASPS SSPDDSLTGN KEPRKTATRK SRRSGRKTPP DDEDTASSSG WQFCALCEVE 
KHLQSVHDSV HKDKPVAPST FVEGFIEHVA PWFKLGVQED SHEFLRLLID AMQTSCQQAR 
ALPHADISRD GSPQGIKPDH RNQDYEYPFS LFRGTVQSNV TCSSCQASSS TLDPIEDIGL 
EVTLPSHVSP GANDRSSRNS SPVPAPALAD VQAAFQRFAR AEALDSGYKC EKCGKVGRAT 
KQSCLSSIPP ILTLHLKRFR YGDSRTTSTA AAGTTGRRTG RSEINQLLGS NADFLAGKSG 
SAKIEGHVKF DLFFDLKPYL TAELKKQHSN MFCRLFAVIV HAGKNSHSGH YIAYVRSLAR 
NEWWKMDDGR VTAASEQEVL MAEAYMLFYR VVQHPIAVQL EEKCKAKFQN RHEREHVQAS 
IAATSIEPEQ SSIRGSSRKR AAPAFEDGEE WARAKTSIPP RLLGLIRKAQ EMVADDIQLS 
PDYFKMISEE AAKENAAIGK GPSKSICEDD VLGGAESFRR KLCDLFYKLA KHFDGDGSGN 
GTSWLCRDKS DRANDDAKRV AVVEPEDVDL L