Gene PHATRDRAFT_46400 details

Gene Information

• Locus tag: PHATRDRAFT_46400
• ID: 7201772
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 224405
• End bp: 226449
• Gene Length: 2045 bp
• Protein Length: 567 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002180781
• Protein GI: 219120068

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCTCATCCA CCGCGTCCAC CATTCCGTAG TTTTCCAAAA ATGGAGATGT TTGATTGTTG 
TTTCACTTGC TTCGAGCGGG GATACGAGTC GTCCGGCGAC GAAATCGAAG ACGACGACGC 
CGAGAATCTG TCCCACGTGG GGCAGGCCGC CTACGACGTC TTACGCAAAC GACACAATCG 
GCAGCACCAC ACGTTATGGA ACGTCACGTC CGGTGTCGTT GTGGGAGAAC TGCACCAGAC 
GCCCCTCACG GGATGGCTCC GCGACGTCGA ATATCCCCGG GACGGCCACG ACGATTGGTT 
TCCCGAGAAA ATGGCGGAAA TCATGGCCCG CACCGAAACA TGGTGCGACG TTATGAGCCT 
GGGACCTCCG GATGGTTTGT TCATGACCCA ATTCCAGGAA GCACTGAAGA CGATCGCGTT 
TCGTGCGACA GGCAAGACCA AGCCGGTCGT CGTGCGCATG ATGTTTGGGA ACATTGTCGG 
CATGCCGGTC AACTGCAACA AAGTCATCAA GGCGTTGACG GCACTCGTTC CCAAAAGTGC 
CAACATCAAC CTCTGGGTGG GTGCTTGGCG TCGTGGAGTT TCCTGGAATC ACGCCAAAAT 
TATTGCCGTC GATGGACAGT ACCTGCACAC GGGAGGTGAG CTTTTCGACA CGGCAGACTG 
CCCCCGGTTT GTCTACGAAA TCTCTCTCCA CACGCGCACG GCTTCTCACC ACCTGCGTAT 
CTCTGTGTGC TTTACCCCCA CACAGGCCAC AATATGTGGG ACGCGCACTA CTTGAAGCAA 
AATCCGATAC ACGACCTTTC GTTTGAATTA CAGGGCCGTG TGGCGCACGA TGGGCATCGG 
TTCGCGAACG AACAATGGGA CTTTATTGAG TTCAAGCAGG ACACCTGTTG TGGACAGTTC 
GTCGACAAAA TCCCCGATGG TATGCCCCTC GTTGCCAAGA CAAGGGTTAC GGTGAGTGAA 
TTTCCGCGGG GGCGGACTGC GGAGTTCCCA CCCCGGTACC GCAAATCCTT GACGCCGATG 
CGTGATCCGC TGCCCAACGA AGTGCCCATG ATCACCGTGG GACGATTCGG GACAATACTG 
CGCCACGCGC GTCCAGCCGA TGACGCATTC TTAGCCATGC TCGGGTCCGC CAAAACAATC 
ATCCGAATGG CCTTGCAAGA CCTGGGCCCG GTGTGCATTC CGGGCACCAG AATTCCGTTG 
CCCGGTTGCG TTTGGCCCAA GGAATACCTG TCCGTGCTGG GTCGCGTTAT CTGGGAACGG 
CACGTGGATG TGGAGATTAC GTTGAGCAAT CCTAATTCGG TCCCGGGAGG ATTGGGCGCG 
ATAGAAGCTT GCTACGGCAA CGGCTGGACC TGTGTCGATG TGGCGGCCGA AATCATCAAG 
ACGATCAAGA AACAATTTCC ACAAGCGCAA GATGCGGCAC TGCGGAAGTG TGTCGCCGAC 
AACCTGCGCG TATGTTTTAT TCGCGAAAAG CGTGGACACG AATACGACGA TGGAGCCACG 
ATGGGCATGC ACGCCAAGCA TTTTATCGTG GACGACGTTT GTTCGTACAC GGGATCGCAG 
AACTTGTATA TTTGTGACCT TGCGGAATGG GGTGTGATAG TGGACGATCC GGTCGCGACG 
AAAAAAATGA TGGATGAGTA CTGGACGCCC ATGTGGCAGG TTTCGTACAC GGGTCAAGAT 
TGCGATGTGC AGGCTGTTAT GGATGGTCTC AAGATCAACC GTGATGGTGA GAATCCTGTC 
TTTATGTCGG CCGAACAGAA ACAGCAAAAG TTAAAAGCGA CTCGCTTGCA AACACACAAT 
CCGGGAAACT CGGAGTATTA CTACGAAGGT GATACCGAAC ACTCTTCGGA ATAGAATTGG 
ATCATCCAGT GACGCGCATG AAATGGACTT CTCGACGCTC TCTGTTCGCG GAGTAATGGC 
AGTGCGAGCA GGCTAATTCC ATCGCGTGTG TGGTGGTTTG CGCAAATTTC CCTCGACAGA 
CCTGTACAGA AGCTCCCATA TTGCTGTACA CAAGTGTATA TGTAAATAGG TTACGTTTGT 
ATTTG 

 

Protein sequence

MEMFDCCFTC FERGYESSGD EIEDDDAENL SHVGQAAYDV LRKRHNRQHH TLWNVTSGVV 
VGELHQTPLT GWLRDVEYPR DGHDDWFPEK MAEIMARTET WCDVMSLGPP DGLFMTQFQE 
ALKTIAFRAT GKTKPVVVRM MFGNIVGMPV NCNKVIKALT ALVPKSANIN LWVGAWRRGV 
SWNHAKIIAV DGQYLHTGGH NMWDAHYLKQ NPIHDLSFEL QGRVAHDGHR FANEQWDFIE 
FKQDTCCGQF VDKIPDGMPL VAKTRVTVSE FPRGRTAEFP PRYRKSLTPM RDPLPNEVPM 
ITVGRFGTIL RHARPADDAF LAMLGSAKTI IRMALQDLGP VCIPGTRIPL PGCVWPKEYL 
SVLGRVIWER HVDVEITLSN PNSVPGGLGA IEACYGNGWT CVDVAAEIIK TIKKQFPQAQ 
DAALRKCVAD NLRVCFIREK RGHEYDDGAT MGMHAKHFIV DDVCSYTGSQ NLYICDLAEW 
GVIVDDPVAT KKMMDEYWTP MWQVSYTGQD CDVQAVMDGL KINRDGENPV FMSAEQKQQK 
LKATRLQTHN PGNSEYYYEG DTEHSSE