Gene PHATRDRAFT_46389 details

Gene Information

• Locus tag: PHATRDRAFT_46389
• ID: 7201646
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 188447
• End bp: 190542
• Gene Length: 2096 bp
• Protein Length: 647 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002180775
• Protein GI: 219120056

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.105715
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAATTCCGTG CGTAACCAAA CGCAATTCAC CGGCTTATAG ACGAGAAGTT CGTAGTGTGT 
GGTAACCATG ACATACTCGC GAAGAATTGT ACTATGCGTT TGGTTGGCCT GGTTGTTGGT 
GGTCACGGAA GCCGCGACGA TCCCGTCTTC GCACGACTCG AGAACAAGCA AGCTCTCCAC 
GGCGAAGAAA GGCGACGATA GCTTTGTCTC GATTCCACTC ATTCCGCACC ATGTGCAAAG 
GCGTCGTCGT ATGTTGGAGA CTGGTGTCGA AGATGAGGCC CTCCCCCGTC CCACTCGCTC 
GCGTCGGGAC TTGGCATCTA CGAACACGGA CCGGGAAATT CAGCAAGTCG GCGCCTTGTA 
CCAGGGATAC GGAACGCACT ACACGGACTT GTGGTGCGGC ACACCGCCGC AACGACAGAC 
CGTTATTGTC GATACAGGCT CCGGTGTTAC GGCCTTTCCC TGTAGTGGAT GCGGTGATTG 
TGGTGTACCG AAATATCACG CGAATCCCTT GTTTGTGGAA GGGGATTCGA GTTCCTTTCA 
CGAGCTCAGT TGTACTGAGT GTTTGAAAGG AACCTGTCGC TCGGGGGCGA AGCAATGTCA 
CGTGGGAATG TCGTATCAGG AAGGAAGTAG CTGGAGCGCG TATGAAGCAC AGGATCGCTG 
TTATGTTGGT GGCTTTCACA ATACCGCGGC AGTGGATAGC GGGTCCAATA GTCCGTTGGA 
CCTCAACCGT GCCGAGGCCT TTGCCTTTGA TCTCAAATTT GGCTGTCAGA CCCGTCTGAC 
AGGCCTGTTT AAGACACAGC TTGCCGACGG AATCATGGGC ATGGATATTG CGAGTAAGTT 
TCTGCCCAGC ACGATTTTGT TTTTGGCTGA TTTTTATTCG TCAGGTGGGC TAATCATCTT 
TTCCTCCGGA ACTTTTGCAG AGGCTGCCTA CTGGCAGCAG ATGTACGATG CGGGAAAGAC 
TGCCAGCAAG AACTTTGCGC TATGCTATGG TCGTCAAGAC ATTGTTGAAC GGGAAGGAAC 
TGAAGCCGGG GCCATGACCT TGGGTGGTTT AGACACCCGT CTACACAAGT CCGACATGGT 
CTACGCCTCC ACCGGTGGCA CAAGCCAAAG TTCAGGGTTC TACAGCGTTC ACGTCCGCAA 
AATTCATCTT CGTGCCGGAA ACGGTGGAGA CTCGGCCGTC AGCAATTCTG AAGGACTCGA 
GGTTCGTGCT CTCGATCTCA GTGAAAGCGA CCTCAACAAT GGACGAGTCA TTGTAGATTC 
GGGCACCACG GATTCCTACT TTTCGCGTAG AGTGGCGTCC GAGTTCAACC GGGTCTACGA 
GGAGATAACG GGGCAATCTT TCACGCATGC GGCTCTTAGT CTCACGGAGG AACAAATCAA 
TGCCATGCCT ACAATCCTTT TCCAGTTGGA AGGAGACGAA GAAGCAAACA AGGCGCTCGT 
AGAAGAACAT CCCGACCGCC AAATTGTTGG TCTGGCAAAC ATTGTGGATC CTGAGCATCC 
TTTCGATATT TTGGTCGCCA TGCCACCTAT GCACTACATG GAATACGACT CTTCCAAAAA 
ATTGTGGCAA GCTCGCTTTT ACGTTGATGA CAGTAGTGGT GGTGTTTTAG GTGCCAACAC 
AATGATGGGA CATAATGTCT TCTTCGACAT CGATAATGGT CGCGTTGGCT GGGCCGAAGC 
ATCGTGTGAT TTTACAGCCC TTGAAGCCGA ATACGGAACT GACGACTTCG CCAGCGATTT 
TACCGATCAT ACTAGGCAGG AACGACCGGA ACCGGATGAT CACGTTTCAG CGCAAGAGGC 
TAAGTTCGAA CCCGACGACA CCCTCCCGAA CAGCAACTCG GGCTTTGATA TGGGTCTGCC 
GAATCAGTTT TGCTCTACTA TGCAGTGCCA GTTGGGTATC GTGATTGGGG TGCTGGCCGC 
CGTTGTCTTC GTTGTCGTGC GTGTGGTGCG ACGCAACACA GGAATTGCCT ATGAAGCGGC 
TGAATTAGAG CTTCAAATGA CTGCCTTACC AGAGGATGAC GACGACATGG CCGGCTACCG 
AGATCACGTG GCACCGGCAA ACACGGGATA CGAGAAAACC GATGAGGAAA TGCCCC 

 

Protein sequence

MTYSRRIVLC VWLAWLLVVT EAATIPSSHD SRTSKLSTAK KGDDSFVSIP LIPHHVQRRR 
RMLETGVEDE ALPRPTRSRR DLASTNTDRE IQQVGALYQG YGTHYTDLWC GTPPQRQTVI 
VDTGSGVTAF PCSGCGDCGV PKYHANPLFV EGDSSSFHEL SCTECLKGTC RSGAKQCHVG 
MSYQEGSSWS AYEAQDRCYV GGFHNTAAVD SGSNSPLDLN RAEAFAFDLK FGCQTRLTGL 
FKTQLADGIM GMDIAKAAYW QQMYDAGKTA SKNFALCYGR QDIVEREGTE AGAMTLGGLD 
TRLHKSDMVY ASTGGTSQSS GFYSVHVRKI HLRAGNGGDS AVSNSEGLEV RALDLSESDL 
NNGRVIVDSG TTDSYFSRRV ASEFNRVYEE ITGQSFTHAA LSLTEEQINA MPTILFQLEG 
DEEANKALVE EHPDRQIVGL ANIVDPEHPF DILVAMPPMH YMEYDSSKKL WQARFYVDDS 
SGGVLGANTM MGHNVFFDID NGRVGWAEAS CDFTALEAEY GTDDFASDFT DHTRQERPEP 
DDHVSAQEAK FEPDDTLPNS NSGFDMGLPN QFCSTMQCQL GIVIGVLAAV VFVVVRVVRR 
NTGIAYEAAE LELQMTALPE DDDDMAGYRD HVAPANTGYE KTDEEMP