Gene PHATRDRAFT_46347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46347 
Symbol 
ID7201617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp64202 
End bp64985 
Gene Length784 bp 
Protein Length255 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180938 
Protein GI219120398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.048303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCTCATGAA GTTGCTAGTC GCTGCCGTCG TACTGCTGCT GGGGCTCGCG GCGAGTCCCA 
CCGACGCCTG GACGTTTCCG GGAGCCCCGT TCCACAAGCC TGTCGTACGT TCCGTTTCGA
CAGACGCGTC CCAACGACCA CAACAAGCAT TCCATTCGCA GCAAGACCGT ACTCTTTGCC
AGCCGCCGGT GACGGTCCGT CCCAGTCGAG TGACGACGGC TGTTCTGGGC TGGTGTGCCG
CCATCATACT CGGCGCCGCC GCTCCGTGGC CGGCCGTCGC TAACGACGCT CGCGTCGTGG
GACAACTGCA AGGATCCGGA CTAGTCTTTA AAGATACTCT GCAGATTGAA GCCTTTGACG
ATCCCAAAAT ACAGGGCGTC ACACTCTACA TTAGCAACTT TCAGAAACCC ATCACGGAAC
GCCTCAACGC CGGATTCTTC AACGATCCCT CCTACGCCAG TGTCGCCTGT GCACAAACCT
CACCCAACAT TCGCGTAGCC GACAACATCA ACGTCTCGCC GCAGGGAGAA CAGGTCTTTA
CGGAAAGCAA GTCGCTCCTC TTCAAATCAC TCCGGGTTCA GCGGATTTAC GACGTGGACA
AGCAAACCGC CGTCTACGTT AGTTTCAATA CCCGACTCGA CAAGTCCGAC GACAGCAACA
AATCGCGATT CAAGTCGTCC CTCTGTGCCG TGCCTCTCAG TAACAACAAC AAAGCAACCG
CTGCGAACAG TGTCGCTGAC GCCGTCGCCA AGGCACCCGT CGGAGCCGAG TGAAACGTGG
CCTT
 
Protein sequence
MKLLVAAVVL LLGLAASPTD AWTFPGAPFH KPVVRSVSTD ASQRPQQAFH SQQDRTLCQP 
PVTVRPSRVT TAVLGWCAAI ILGAAAPWPA VANDARVVGQ LQGSGLVFKD TLQIEAFDDP
KIQGVTLYIS NFQKPITERL NAGFFNDPSY ASVACAQTSP NIRVADNINV SPQGEQVFTE
SKSLLFKSLR VQRIYDVDKQ TAVYVSFNTR LDKSDDSNKS RFKSSLCAVP LSNNNKATAA
NSVADAVAKA PVGAE