Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46347 |
Symbol | |
ID | 7201617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 64202 |
End bp | 64985 |
Gene Length | 784 bp |
Protein Length | 255 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180938 |
Protein GI | 219120398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.048303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCTCATGAA GTTGCTAGTC GCTGCCGTCG TACTGCTGCT GGGGCTCGCG GCGAGTCCCA CCGACGCCTG GACGTTTCCG GGAGCCCCGT TCCACAAGCC TGTCGTACGT TCCGTTTCGA CAGACGCGTC CCAACGACCA CAACAAGCAT TCCATTCGCA GCAAGACCGT ACTCTTTGCC AGCCGCCGGT GACGGTCCGT CCCAGTCGAG TGACGACGGC TGTTCTGGGC TGGTGTGCCG CCATCATACT CGGCGCCGCC GCTCCGTGGC CGGCCGTCGC TAACGACGCT CGCGTCGTGG GACAACTGCA AGGATCCGGA CTAGTCTTTA AAGATACTCT GCAGATTGAA GCCTTTGACG ATCCCAAAAT ACAGGGCGTC ACACTCTACA TTAGCAACTT TCAGAAACCC ATCACGGAAC GCCTCAACGC CGGATTCTTC AACGATCCCT CCTACGCCAG TGTCGCCTGT GCACAAACCT CACCCAACAT TCGCGTAGCC GACAACATCA ACGTCTCGCC GCAGGGAGAA CAGGTCTTTA CGGAAAGCAA GTCGCTCCTC TTCAAATCAC TCCGGGTTCA GCGGATTTAC GACGTGGACA AGCAAACCGC CGTCTACGTT AGTTTCAATA CCCGACTCGA CAAGTCCGAC GACAGCAACA AATCGCGATT CAAGTCGTCC CTCTGTGCCG TGCCTCTCAG TAACAACAAC AAAGCAACCG CTGCGAACAG TGTCGCTGAC GCCGTCGCCA AGGCACCCGT CGGAGCCGAG TGAAACGTGG CCTT
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Protein sequence | MKLLVAAVVL LLGLAASPTD AWTFPGAPFH KPVVRSVSTD ASQRPQQAFH SQQDRTLCQP PVTVRPSRVT TAVLGWCAAI ILGAAAPWPA VANDARVVGQ LQGSGLVFKD TLQIEAFDDP KIQGVTLYIS NFQKPITERL NAGFFNDPSY ASVACAQTSP NIRVADNINV SPQGEQVFTE SKSLLFKSLR VQRIYDVDKQ TAVYVSFNTR LDKSDDSNKS RFKSSLCAVP LSNNNKATAA NSVADAVAKA PVGAE
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