Gene PHATRDRAFT_46346 details

Gene Information

• Locus tag: PHATRDRAFT_46346
• ID: 7201616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 61754
• End bp: 63904
• Gene Length: 2151 bp
• Protein Length: 716 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180745
• Protein GI: 219119993

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0737232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAAG ATAATCTTTA CGAAAAATCC CAGTCTCATT ATGAGCGCAA GGTTGCTCGC 
CAGCGTCAGT TAGAGATGAT GGAAGCCGCA GCTTCGGGTA CGGCAGCGGA AATGGAGCTC 
GACACGAGCA GTTTTGCCGA AGCCGACGGC TCCTTCATGC GCCAACGCAA CCAAGAGACG 
GCTCGTCGGT TTCTGCACGA CGAAGACGAC TCGCAAGAAC AAACAACCCC GATGCGAGGA 
AATTCTACCA CCGGTCACCA CACATTATTT GGGCAACGAC AATCTTCCGG TCCGTCACTC 
AATTTAATGG ACCATTCCGC TGGCGTTTAT ACCGAGCAGG TGTCGGGACT GTTCAGTGAT 
GCGGTTCATT CCGTCGGAAA GTTCATTTTC AAGGTGTCGG GTTCTGAGAT AAGAGGAAAT 
GAGCACGATG CGATAGCAGC CACGGATGGA GATGTGTTTC TGGGTGATGA TTACAAGCGT 
CGGTCGTCTA TGCGTGCGAC TCAATGCAGC ACGATCTTAG CGTCGCGTGT CATGTTTTTC 
AAATCTCTTC TGCGCGACAA GAAACGATTG GGACTGTTGG CCATGGTCTT TTTAAGTCTT 
TTTGCGATTG TCTACGCCAC CAATATGGCA CTGCAACGCA GACCAACGGA AAAGATACTT 
CGGGAAAATA ATTCTTTCCG CTTCAACGCT GTTTTGGATC ACATTGTAAC GGAAAGTGTG 
AGCCACACCG AAGTGTTCCT AAACTACGAC AGTGCCGAGT ACCACGCACT CCGCTGGGTG 
GCGTATTCGG ATCCGGCCCG TCTCGACCCC ATGGATCCCC TCATTCTCCA ACGGTACGCT 
CTGGCGGTCT TTTACTACGG TTCTTACCTG GCCTTCTCGG AGCAATACGG AGAGCAAAAG 
CCTATTCAAT TCGAAGGACA ACAGTTTGAG GGTGTCCCTA ATCCCGGCTG GACGCGCAAG 
GATTACTGGA TGACGGGCAA GGGAGTTTGC AAATGGTACG GCGTGCTCTG TGAAGGCGAA 
ATGGTCAACG GAGTGGAAAT AGCGGACTTT GACAAGAATG CGCCGATTAT TGCACTCAAC 
TTGACCGCGA ACCAGCTGCA CGGTACACTA CCAATGGAAT TCAAAGCTCT CGATTCGTTG 
CTGGTTCTGG ACTTTTCCCG CAACAGTATC GGAGGAACCA TTCCTCTGCA ACTCGGGCGT 
AGCATGATCG AACTCCAGTA CTTGTTCTTG AACCGTAACG AAATTACGGG GACGCTGCCT 
AGCGAAATGG GTTTCATGGA GAGTGTTCGC TCGATCCGTC TGGGCAACAA CCGCTTACAG 
GGATCCATCC CGTCTACTTT TAATCGTATG TACCAGTTAC GAGATCTAGG CTTGGACAAT 
AACTACATTA CTGCCGACAT TCCCGATCTA GAAGGCTGTC AGCACTTGAT TGGCCTGTAC 
CTCAACAACA ATCGCTTAAA CGGCCGACTG GACACCTCAA TTGGCAAGCT GACGAACTTG 
TTCGAACTAC GGGTAGACCA AAACTATCTA CAGGGCACGA TTCCTCCAGA AGTATCGAAT 
ATGCGTCGAT TGGAACACTT CAGAGCCAAC AACAATCTCT TGACGGGTAC TATTCCGAAC 
GAGATATTCC TCAAAACCTT ACGCATGAAG GAAGTCGATT TGCAGCGTAA CAATTTTGAA 
GGGCCGTTGC CAGTCTCCCT CGGTGGTTTG TCACATTTGC GCCTACTCAA GCTCAACAAC 
AATGCTTTTC AAGGTGGTAT TCCCCAAGCT TGGAATCGCA TGCACGGTTT GCAAATTCTG 
CATCTCATGA GGAACAAGCT GACGGGCACA ATCCCTACGG GCATCGCAGG TTTGCGGGAG 
CTCCGGGATC TGTCTGTGGC CAACAACCGC TTGGCCGGTA CGATTCCCCG CGAAATTGCC 
GCGTGCGAAG TTCTTACGGA AGCCTATTTC GACTACAATC AGTTCACGGG GACGATTCCG 
GCCGAATTTG GCTTTTTGAA ACACTTGGAG ACGTTACGGG TATCCGGCAA CTTGTTTCAT 
GGTGACGTAC CGGTCCAAGT GTGTGCGCTC ACCCGCGAAC ACGTGTTGAC CAATTTCATG 
GCGGATTGCA AAAGCAAGGT GACCTGCGAG TGCTGTCACC GGTGTGCGTA A 

 

Protein sequence

MSQDNLYEKS QSHYERKVAR QRQLEMMEAA ASGTAAEMEL DTSSFAEADG SFMRQRNQET 
ARRFLHDEDD SQEQTTPMRG NSTTGHHTLF GQRQSSGPSL NLMDHSAGVY TEQVSGLFSD 
AVHSVGKFIF KVSGSEIRGN EHDAIAATDG DVFLGDDYKR RSSMRATQCS TILASRVMFF 
KSLLRDKKRL GLLAMVFLSL FAIVYATNMA LQRRPTEKIL RENNSFRFNA VLDHIVTESV 
SHTEVFLNYD SAEYHALRWV AYSDPARLDP MDPLILQRYA LAVFYYGSYL AFSEQYGEQK 
PIQFEGQQFE GVPNPGWTRK DYWMTGKGVC KWYGVLCEGE MVNGVEIADF DKNAPIIALN 
LTANQLHGTL PMEFKALDSL LVLDFSRNSI GGTIPLQLGR SMIELQYLFL NRNEITGTLP 
SEMGFMESVR SIRLGNNRLQ GSIPSTFNRM YQLRDLGLDN NYITADIPDL EGCQHLIGLY 
LNNNRLNGRL DTSIGKLTNL FELRVDQNYL QGTIPPEVSN MRRLEHFRAN NNLLTGTIPN 
EIFLKTLRMK EVDLQRNNFE GPLPVSLGGL SHLRLLKLNN NAFQGGIPQA WNRMHGLQIL 
HLMRNKLTGT IPTGIAGLRE LRDLSVANNR LAGTIPREIA ACEVLTEAYF DYNQFTGTIP 
AEFGFLKHLE TLRVSGNLFH GDVPVQVCAL TREHVLTNFM ADCKSKVTCE CCHRCA