Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46343 |
Symbol | |
ID | 7201614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 49095 |
End bp | 49946 |
Gene Length | 852 bp |
Protein Length | 177 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180937 |
Protein GI | 219120396 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.22985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGATCCCTTA CGAACTTGCT CACAACTCAT GCGCACGACG CAAACCTAGT TGTAACATCA TCCTTCGCAG ATATAGCATG CCCAGCAGAT TGACACCCGG CTTTGCTCTC GTTGTTTTAC TGTTTCTGTG CACACTTCTC GAGCCCTTGT CCGCTTTTAC CAGACCTTCC ATATTGAGTT GTGGGAGCTC GCCACGCCAT TGCTTCGTCG ACAGCCGAGT CAGAATGGGA TCCGCCGCCT CTTCTTCTGG CATGCAAACG CTACCATCGA ACGTGGTGAA GTATTCTCAG GTGCCGAAAC AGGGCGTCTT CACTGCCGAC AAAATTCCCA AAGGCCTTTT GAAGTCACAC ACAACCAAAG CCGGTACTTG GGGCATGATT CGGGTCACCC AAGGCCAACT CGAATATCAA ATCCACAACG AAGTGGAGGG TACTGAATCG GGCGGCACGC CACTAAAGAT TGTTCTGGAA GGTCCCGACG GACGTGGGAT TGTCGAACCC ACCGTCAAGC ACCAAGTCAA ACCTTTGACG GATGATGTTC AATTCGTCGT CGAGTTTCAT CGTGTCCCAG GAACCGGGGT CGTCGACGAA CCACGCGAGG GTCTGGCGTG AAACGCTATA CTCCCTACGC ATGGGTACTG TGACAAACTC GGATGCGTCC CATTCTAAAT GCTATGAATG ATAGACATGT CTATGTAATC GTACCCTGGC GCTATTTACT GCTAATGAAA AAACTTGCCA GCCTCCTTAC TGTTAATCGT AGATTTTCAA GTCCGTTGTT TCATAGGATG GTTTATTGGC CAGTGTCAAT CATCACAACG CAAGTGTTAC GTATACTCTT TTGACTGAAT AA
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Protein sequence | MPSRLTPGFA LVVLLFLCTL LEPLSAFTRP SILSCGSSPR HCFVDSRVRM GSAASSSGMQ TLPSNVVKYS QVPKQGVFTA DKIPKGLLKS HTTKAGTWGM IRVTQGQLEY QIHNEVEGTE SGGTPLKIVL EGPDGRGIVE PTVKHQVKPL TDDVQFVVEF HRVPGTGVVD EPREGLA
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