Gene PHATRDRAFT_46343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46343 
Symbol 
ID7201614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp49095 
End bp49946 
Gene Length852 bp 
Protein Length177 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180937 
Protein GI219120396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.22985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGATCCCTTA CGAACTTGCT CACAACTCAT GCGCACGACG CAAACCTAGT TGTAACATCA 
TCCTTCGCAG ATATAGCATG CCCAGCAGAT TGACACCCGG CTTTGCTCTC GTTGTTTTAC
TGTTTCTGTG CACACTTCTC GAGCCCTTGT CCGCTTTTAC CAGACCTTCC ATATTGAGTT
GTGGGAGCTC GCCACGCCAT TGCTTCGTCG ACAGCCGAGT CAGAATGGGA TCCGCCGCCT
CTTCTTCTGG CATGCAAACG CTACCATCGA ACGTGGTGAA GTATTCTCAG GTGCCGAAAC
AGGGCGTCTT CACTGCCGAC AAAATTCCCA AAGGCCTTTT GAAGTCACAC ACAACCAAAG
CCGGTACTTG GGGCATGATT CGGGTCACCC AAGGCCAACT CGAATATCAA ATCCACAACG
AAGTGGAGGG TACTGAATCG GGCGGCACGC CACTAAAGAT TGTTCTGGAA GGTCCCGACG
GACGTGGGAT TGTCGAACCC ACCGTCAAGC ACCAAGTCAA ACCTTTGACG GATGATGTTC
AATTCGTCGT CGAGTTTCAT CGTGTCCCAG GAACCGGGGT CGTCGACGAA CCACGCGAGG
GTCTGGCGTG AAACGCTATA CTCCCTACGC ATGGGTACTG TGACAAACTC GGATGCGTCC
CATTCTAAAT GCTATGAATG ATAGACATGT CTATGTAATC GTACCCTGGC GCTATTTACT
GCTAATGAAA AAACTTGCCA GCCTCCTTAC TGTTAATCGT AGATTTTCAA GTCCGTTGTT
TCATAGGATG GTTTATTGGC CAGTGTCAAT CATCACAACG CAAGTGTTAC GTATACTCTT
TTGACTGAAT AA
 
Protein sequence
MPSRLTPGFA LVVLLFLCTL LEPLSAFTRP SILSCGSSPR HCFVDSRVRM GSAASSSGMQ 
TLPSNVVKYS QVPKQGVFTA DKIPKGLLKS HTTKAGTWGM IRVTQGQLEY QIHNEVEGTE
SGGTPLKIVL EGPDGRGIVE PTVKHQVKPL TDDVQFVVEF HRVPGTGVVD EPREGLA