Gene PHATRDRAFT_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3832 
Symbol 
ID7201718 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp792656 
End bp793967 
Gene Length1312 bp 
Protein Length349 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181077 
Protein GI219120687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGGTCCTACG TGGAAGATCA AGATCATTGG TGGATGGCGG GCATCCACCG CAGTGTCGAA 
ATTATTCGAC GCAAACCTAA GGCTGACATC ATAGATTACC AGATCCAAGC CGACGCATCA
GGCCATTTGG ACGTGCACGT GGAGTGCCGA CCCAAAAGTG GTCAGGAGGT TTCCCGAAGT
ATCGTGCTGC GATTATACGA CGACGAGCAA ACTTCAGACG ATGGGAATAT ACGGTACGGC
TCGTGCTTGC TGGAGACGAA ACCGCTATCG GTCGATATGT ACGGTTCATT TAACTTTGCG
ACAACCTTAC AAAATGCCAA ACTGTGGTCG GCCGAGATTC CGAATCTGTA CACCTTGACC
ATTACGCTGT CGGTGGAAGG TCAGGTGGGA CAGGTGGAGA GCGCTCGCAT CGGCTTTCGA
ACAGTCGATA TTTCCAATGG TCAAGTACAC GTCAACGGCA AGGCAATAAC AATTTGTGGT
ATGAATCGTC ACGAGCATGA TCCAGATCAC GGCAAGGTTG TAAGCTTGGA TCGCATGAAG
CAAGATATCG TCACACTCAA GTACGTTTCG TGTCGTAAAC TCTTGTTTCA CCTGTTTTGT
GATTAAATTT AATGGAAGGA TAGTCCCGAG GCCTGACGAC ATCTTTGTTT GCCTTAGACA
AAACAATTTT AATGCTGTGC GAACAAGCCA CTATCCCACA CATTCTTCGT TTTATCGACT
GTGCGATTAC TACGGATTGT ACGTGTGCGA CGAGTCCAAT TTGGAGACGC ACGGTATGAA
ACCGATGGGG CGATTGGCTC ACGATTGGGG CTGGAATAGC GCGTTCATCT CTCGCATTAC
GCGGTTAATT CATCGAGATC GCAACCATGC CTGTATCATC TTTTGGTCAC TTGGCAATGA
AGGTAACTGA TTCCGACATT GTCTGCGACT CGTGACGTAT TACGTACAGA CTCTGACGCC
TGCGTTGCTT CTTTCAATTC TTTTTAAGCG GGCCGTGGGC GAAACCTTTC GATGGCAAGG
GATCTCGTCC GGCAGCTCGA CTCGTCTAGG CCTATTTGCT ACGAAAGTGG CGGTGCTTTA
GCCGAAGGAA CAGGTCGTAC AGAGCTGACC GATGTAATTT GTACCATGTA TCCCGTGGTC
CCAAGGACTT TGGAATTGGC CACAAGAGCG GACGAAGATC GCCCAGGTAT GGATTCTCAC
AATCTAGAGG TTGATAGCTA CAGCTTCTTA CTAACAATTC TCACCATGCC TTTTGTCTGA
ATTTATAGTG ATTCTATGCG AATATTCTCA CGCCATGGGA AATTCAAACG GG
 
Protein sequence
GSYVEDQDHW WMAGIHRSVE IIRRKPKADI IDYQIQADAS GHLDVHVECR PKSGQEVSRS 
IVLRLYDDEQ TSDDGNIRYG SCLLETKPLS VDMYGSFNFA TTLQNAKLWS AEIPNLYTLT
ITLSVEGQVG QVESARIGFR TVDISNGQVH VNGKAITICG MNRHEHDPDH GKVVSLDRMK
QDIVTLKQNN FNAVRTSHYP THSSFYRLCD YYGLYVCDES NLETHGMKPM GRLAHDWGWN
SAFISRITRL IHRDRNHACI IFWSLGNEAG RGRNLSMARD LVRQLDSSRP ICYESGGALA
EGTGRTELTD VICTMYPVVP RTLELATRAD EDRPVILCEY SHAMGNSNG