Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_3832 |
Symbol | |
ID | 7201718 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 792656 |
End bp | 793967 |
Gene Length | 1312 bp |
Protein Length | 349 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181077 |
Protein GI | 219120687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGGTCCTACG TGGAAGATCA AGATCATTGG TGGATGGCGG GCATCCACCG CAGTGTCGAA ATTATTCGAC GCAAACCTAA GGCTGACATC ATAGATTACC AGATCCAAGC CGACGCATCA GGCCATTTGG ACGTGCACGT GGAGTGCCGA CCCAAAAGTG GTCAGGAGGT TTCCCGAAGT ATCGTGCTGC GATTATACGA CGACGAGCAA ACTTCAGACG ATGGGAATAT ACGGTACGGC TCGTGCTTGC TGGAGACGAA ACCGCTATCG GTCGATATGT ACGGTTCATT TAACTTTGCG ACAACCTTAC AAAATGCCAA ACTGTGGTCG GCCGAGATTC CGAATCTGTA CACCTTGACC ATTACGCTGT CGGTGGAAGG TCAGGTGGGA CAGGTGGAGA GCGCTCGCAT CGGCTTTCGA ACAGTCGATA TTTCCAATGG TCAAGTACAC GTCAACGGCA AGGCAATAAC AATTTGTGGT ATGAATCGTC ACGAGCATGA TCCAGATCAC GGCAAGGTTG TAAGCTTGGA TCGCATGAAG CAAGATATCG TCACACTCAA GTACGTTTCG TGTCGTAAAC TCTTGTTTCA CCTGTTTTGT GATTAAATTT AATGGAAGGA TAGTCCCGAG GCCTGACGAC ATCTTTGTTT GCCTTAGACA AAACAATTTT AATGCTGTGC GAACAAGCCA CTATCCCACA CATTCTTCGT TTTATCGACT GTGCGATTAC TACGGATTGT ACGTGTGCGA CGAGTCCAAT TTGGAGACGC ACGGTATGAA ACCGATGGGG CGATTGGCTC ACGATTGGGG CTGGAATAGC GCGTTCATCT CTCGCATTAC GCGGTTAATT CATCGAGATC GCAACCATGC CTGTATCATC TTTTGGTCAC TTGGCAATGA AGGTAACTGA TTCCGACATT GTCTGCGACT CGTGACGTAT TACGTACAGA CTCTGACGCC TGCGTTGCTT CTTTCAATTC TTTTTAAGCG GGCCGTGGGC GAAACCTTTC GATGGCAAGG GATCTCGTCC GGCAGCTCGA CTCGTCTAGG CCTATTTGCT ACGAAAGTGG CGGTGCTTTA GCCGAAGGAA CAGGTCGTAC AGAGCTGACC GATGTAATTT GTACCATGTA TCCCGTGGTC CCAAGGACTT TGGAATTGGC CACAAGAGCG GACGAAGATC GCCCAGGTAT GGATTCTCAC AATCTAGAGG TTGATAGCTA CAGCTTCTTA CTAACAATTC TCACCATGCC TTTTGTCTGA ATTTATAGTG ATTCTATGCG AATATTCTCA CGCCATGGGA AATTCAAACG GG
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Protein sequence | GSYVEDQDHW WMAGIHRSVE IIRRKPKADI IDYQIQADAS GHLDVHVECR PKSGQEVSRS IVLRLYDDEQ TSDDGNIRYG SCLLETKPLS VDMYGSFNFA TTLQNAKLWS AEIPNLYTLT ITLSVEGQVG QVESARIGFR TVDISNGQVH VNGKAITICG MNRHEHDPDH GKVVSLDRMK QDIVTLKQNN FNAVRTSHYP THSSFYRLCD YYGLYVCDES NLETHGMKPM GRLAHDWGWN SAFISRITRL IHRDRNHACI IFWSLGNEAG RGRNLSMARD LVRQLDSSRP ICYESGGALA EGTGRTELTD VICTMYPVVP RTLELATRAD EDRPVILCEY SHAMGNSNG
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