| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_36570 |
|---|
| Symbol | |
|---|
| ID | 7201716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 784031 |
|---|
| End bp | 785449 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180896 |
|---|
| Protein GI | 219120310 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCTT TATCGATGAA GTCGATATTC TCTACCGTGA TTTTGCTCCT TGCTTCTCCA
GTTGTGGTGT GTGTCGACAG TGAGAAACAG CAAGATCCCA CGGAAACCTT ACAAGAATTT
CAAGCTCGCA TGGCATCTTC AATCCAAGGC CTCCTTGCGC AACAGAATCA AACTGATGCT
TTGTGGTTTG GTATTTCAGA CCCATTTTAC GGAAGGGTAT ACTGGACGTT TGGATTTGCC
AACAAGGGAA GTAGCACACC TGCTACCGCG AACGATCATT TCCAGATTGG ATCCATTTCC
AAATCTTTTG GAGCAACTGT GATTCTCTTA CTGGCAGAAA GGGGCGATTT GAGTCTGGTG
GATACAATCG CCAATCTCGC GCCGGAATTG ACAGCTCAAT TTCCTGTGTA TGCCGACTTT
ACTGTAGCGG ATTTGCTTGG CATGCAAGCT CTAGTTCCTG ATTTTCTGGA TGATCCGACC
GGTCTCGTCA GAAACCTGAC GGCTGATCCT ACCTTGCGTT TCTCTATTCC AGAAATGATC
CAAGCCTCTT TGCGTAGTGG ACAAGTGGAG GTATGTCCAC AAGGGGAGGA ATGCGCTTTT
TACAGTACTA CCAATTTCCT CGTTTTGGAG TATATTGCCG AGAAGATCAC CGACACGCCT
ATGCCTCAAT TGATTGCTGA TCTCATCACC AAACCGTTGG ACATTGGTGA TACAGTGGAG
CCAAAACGCG ATAGTGACGG TGTCTTACCA GACCCCACCG TCACTCCGTA CGCGGGCAGT
AAATGCGTTG AAGAGTTTCA GCAGAGAGGC ACTACCGTCG ATCCGGGTGC AGACTTGACC
GAGCTATCAC GTGCCGTTTC CAGTTTTGGA ATTGGCGGAA ATATGTACAG TACTATCCGC
AATCTGGTTG TATGGGCACA AAGTGGCACG GGCGATTCTT TGTTAGCGAA CAACACAGTC
ACAGATCGTC ACGTCTACCG CACTATTCCA TCCACCGACC GATCGTATGG GATGGGTCAA
TATCAGCTCG AGGGGAACTG GTACGGTCAT GAGGGTGGTA CGTTTGGGTT TGGGTCGCAG
GCCTACCGAA ACGACTGTTT CAACGCAGCG TACGCTGCTG CCGTGAATAC GTGTGCGTAC
ACGGACATTC TTGACCAATT GCGCGTTTTG TACCAAGCGG AGCTGGAAGG GCGCATTACG
GACACTGGCG GTAGTCCCAC GATGAGCCCA CCAGAAAGAG AAAGGGGGAA TGGAGGTGGA
GGAGGATCTG GTAGTGGTGG TGGTAGTATA GCTGTATCTC CAGAGGCTTC GGATCTACCA
ACGGCGGCCC CGGTCGGTGG CCCGTCCCTG GGAGCGACTC TTTGTTACGC TGCGTGCATT
GCCGTGAACC TTGTCGCCAC GGTTCTGACT CTCCGTTAG
|
|---|
| Protein sequence | MVSLSMKSIF STVILLLASP VVVCVDSEKQ QDPTETLQEF QARMASSIQG LLAQQNQTDA
LWFGISDPFY GRVYWTFGFA NKGSSTPATA NDHFQIGSIS KSFGATVILL LAERGDLSLV
DTIANLAPEL TAQFPVYADF TVADLLGMQA LVPDFLDDPT GLVRNLTADP TLRFSIPEMI
QASLRSGQVE VCPQGEECAF YSTTNFLVLE YIAEKITDTP MPQLIADLIT KPLDIGDTVE
PKRDSDGVLP DPTVTPYAGS KCVEEFQQRG TTVDPGADLT ELSRAVSSFG IGGNMYSTIR
NLVVWAQSGT GDSLLANNTV TDRHVYRTIP STDRSYGMGQ YQLEGNWYGH EGGTFGFGSQ
AYRNDCFNAA YAAAVNTCAY TDILDQLRVL YQAELEGRIT DTGGSPTMSP PERERGNGGG
GGSGSGGGSI AVSPEASDLP TAAPVGGPSL GATLCYAACI AVNLVATVLT LR
|
|---|
| |